FFCP PHASE1:Hg19::chr17:77026478..77026512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77026478..77026512,+ | |||
|coexpression_cluster_id=C366 | |coexpression_cluster_id=C366 | ||
|description=CAGE_peak_at_chr17:77026478..77026512,+ | |description=CAGE_peak_at_chr17:77026478..77026512,+ | ||
|id=chr17:77026478..77026512,+ | |id=chr17:77026478..77026512,+ | ||
|ontology_enrichment_celltype=CL:0000819!9.51e-07!1 | |ontology_enrichment_celltype=CL:0000819!9.51e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000746;3.66e-23;3!CL:0000737;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,3.27e-23,3;CL:0000513,3.27e-23,3;CL:0000737,8.69e-18,4 | |||
|ontology_enrichment_development_v019=CL:0000513;3.66e-23;3!UBERON:0005062;7.35e-18;4!UBERON:0007284;7.35e-18;4 | |||
|ontology_enrichment_disease=DOID:0060073!9.51e-07!1;DOID:8675!9.51e-07!1 | |ontology_enrichment_disease=DOID:0060073!9.51e-07!1;DOID:8675!9.51e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!8.16e-18!3;UBERON:0009751!8.16e-18!3;UBERON:0000946!8.16e-18!3;UBERON:0002523!8.16e-18!3;UBERON:0005983!8.16e-18!3;UBERON:0002165!8.16e-18!3;UBERON:0002062!8.16e-18!3;UBERON:0007280!8.16e-18!3;UBERON:0002133!1.05e-12!2;UBERON:0006947!6.42e-09!3;UBERON:0004054!6.42e-09!3;UBERON:0002134!2.09e-07!1;UBERON:0005208!2.09e-07!1;UBERON:0005946!2.09e-07!1;UBERON:0005965!2.09e-07!1;UBERON:0002078!2.09e-07!1;UBERON:0000998!2.50e-07!1;UBERON:0006868!2.50e-07!1;UBERON:0001000!2.66e-07!1;UBERON:0005352!2.66e-07!1;UBERON:0002135!5.69e-07!1;UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1;UBERON:0005904!6.97e-07!4;UBERON:0002146!8.02e-07!1;UBERON:0005623!8.02e-07!1 | |ontology_enrichment_uberon=UBERON:0003978!8.16e-18!3;UBERON:0009751!8.16e-18!3;UBERON:0000946!8.16e-18!3;UBERON:0002523!8.16e-18!3;UBERON:0005983!8.16e-18!3;UBERON:0002165!8.16e-18!3;UBERON:0002062!8.16e-18!3;UBERON:0007280!8.16e-18!3;UBERON:0002133!1.05e-12!2;UBERON:0006947!6.42e-09!3;UBERON:0004054!6.42e-09!3;UBERON:0002134!2.09e-07!1;UBERON:0005208!2.09e-07!1;UBERON:0005946!2.09e-07!1;UBERON:0005965!2.09e-07!1;UBERON:0002078!2.09e-07!1;UBERON:0000998!2.50e-07!1;UBERON:0006868!2.50e-07!1;UBERON:0001000!2.66e-07!1;UBERON:0005352!2.66e-07!1;UBERON:0002135!5.69e-07!1;UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1;UBERON:0005904!6.97e-07!4;UBERON:0002146!8.02e-07!1;UBERON:0005623!8.02e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.23e-66;1!UBERON:0005208;1.23e-66;1!UBERON:0004145;1.23e-66;1!UBERON:0005946;1.23e-66;1!UBERON:0005965;1.23e-66;1!UBERON:0002078;1.23e-66;1!UBERON:0002081;3.61e-34;2!UBERON:0002133;3.61e-34;2!UBERON:0003978;2.62e-23;3!UBERON:0004151;2.62e-23;3!UBERON:0000946;2.62e-23;3!UBERON:0000948;3.89e-13;22!UBERON:0007100;1.06e-11;25!UBERON:0010313;5.73e-08;10!UBERON:0001264;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.23e-66,1;UBERON:0005208,1.23e-66,1;UBERON:0005946,1.23e-66,1;UBERON:0005965,1.23e-66,1;UBERON:0002078,1.23e-66,1;UBERON:0002081,3.61e-34,2;UBERON:0002133,3.61e-34,2;UBERON:0010227,3.61e-34,2;UBERON:0003978,2.62e-23,3;UBERON:0009751,2.62e-23,3;UBERON:0004151,2.62e-23,3;UBERON:0000946,2.62e-23,3;UBERON:0002523,2.62e-23,3;UBERON:0005983,2.62e-23,3;UBERON:0004145,2.62e-23,3;UBERON:0002165,2.62e-23,3;UBERON:0002062,2.62e-23,3;UBERON:0007280,2.62e-23,3;UBERON:0000948,3.75e-12,24;UBERON:0005498,3.75e-12,24;UBERON:0004140,3.75e-12,24;UBERON:0009881,3.75e-12,24;UBERON:0004141,3.75e-12,24;UBERON:0003084,3.75e-12,24;UBERON:0007005,3.75e-12,24;UBERON:0004139,3.75e-12,24;UBERON:0004291,3.75e-12,24;UBERON:0007100,6.25e-11,27;UBERON:0004797,8.16e-11,7;UBERON:0010313,5.73e-08,10;UBERON:0002342,5.73e-08,10;UBERON:0005062,5.73e-08,10;UBERON:0001264,6.56e-08,10 | |||
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|short_description=p@chr17:77026478..77026512,+ | |short_description=p@chr17:77026478..77026512,+ | ||
}} | }} |
Latest revision as of 22:12, 25 July 2015
Short description: | p@chr17:77026478..77026512, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77026478..77026512, + |
Coexpression cluster: | C366_heart_vagina_adipose_diaphragm_left_aorta_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 3.27e-23 | 3 |
cardiac muscle myoblast | 3.27e-23 | 3 |
striated muscle cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.23e-66 | 1 |
right atrium valve | 1.23e-66 | 1 |
outflow tract of atrium | 1.23e-66 | 1 |
outflow part of right atrium | 1.23e-66 | 1 |
right cardiac atrium | 1.23e-66 | 1 |
cardiac atrium | 3.61e-34 | 2 |
atrioventricular valve | 3.61e-34 | 2 |
future cardiac atrium | 3.61e-34 | 2 |
valve | 2.62e-23 | 3 |
cardiac mesenchyme | 2.62e-23 | 3 |
cardiac chamber | 2.62e-23 | 3 |
cardial valve | 2.62e-23 | 3 |
tunica intima | 2.62e-23 | 3 |
heart layer | 2.62e-23 | 3 |
outflow tract | 2.62e-23 | 3 |
endocardium | 2.62e-23 | 3 |
endocardial cushion | 2.62e-23 | 3 |
presumptive endocardium | 2.62e-23 | 3 |
heart | 3.75e-12 | 24 |
primitive heart tube | 3.75e-12 | 24 |
primary heart field | 3.75e-12 | 24 |
anterior lateral plate mesoderm | 3.75e-12 | 24 |
heart tube | 3.75e-12 | 24 |
heart primordium | 3.75e-12 | 24 |
cardiac mesoderm | 3.75e-12 | 24 |
cardiogenic plate | 3.75e-12 | 24 |
heart rudiment | 3.75e-12 | 24 |
primary circulatory organ | 6.25e-11 | 27 |
blood vessel layer | 8.16e-11 | 7 |
neural crest-derived structure | 5.73e-08 | 10 |
neural crest | 5.73e-08 | 10 |
neural fold | 5.73e-08 | 10 |
pancreas | 6.56e-08 | 10 |