FFCP PHASE1:Hg19::chr17:77018953..77018966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77018953..77018966,+ | |||
|coexpression_cluster_id=C1794 | |||
|description=CAGE_peak_at_chr17:77018953..77018966,+ | |description=CAGE_peak_at_chr17:77018953..77018966,+ | ||
|id=chr17:77018953..77018966,+ | |id=chr17:77018953..77018966,+ | ||
|ontology_enrichment_celltype=CL:0002494!9.73e-35!16;CL:0000569!3.77e-11!4;CL:0000011!3.77e-11!4;CL:0002548!4.51e-11!6;CL:0000136!9.53e-10!15;CL:0000746!2.92e-09!3;CL:0000513!2.92e-09!3;CL:0002592!1.33e-08!3;CL:0000187!3.21e-08!54;CL:0000680!1.37e-07!57;CL:0000056!1.37e-07!57;CL:0000355!1.37e-07!57;CL:0000183!3.31e-07!59;CL:0000192!3.69e-07!42;CL:0000514!3.69e-07!42;CL:0000393!5.02e-07!60;CL:0000211!5.02e-07!60;CL:0000737!5.21e-07!4 | |ontology_enrichment_celltype=CL:0002494!9.73e-35!16;CL:0000569!3.77e-11!4;CL:0000011!3.77e-11!4;CL:0002548!4.51e-11!6;CL:0000136!9.53e-10!15;CL:0000746!2.92e-09!3;CL:0000513!2.92e-09!3;CL:0002592!1.33e-08!3;CL:0000187!3.21e-08!54;CL:0000680!1.37e-07!57;CL:0000056!1.37e-07!57;CL:0000355!1.37e-07!57;CL:0000183!3.31e-07!59;CL:0000192!3.69e-07!42;CL:0000514!3.69e-07!42;CL:0000393!5.02e-07!60;CL:0000211!5.02e-07!60;CL:0000737!5.21e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002494;2.37e-37;16!CL:0000746;2.53e-24;3!CL:0000737;2.12e-18;4!CL:0002548;6.12e-12;6!CL:0002591;6.46e-09;1!CL:0000569;1.63e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.24e-37,16;CL:0000746,3.91e-24,3;CL:0000513,3.91e-24,3;CL:0000737,2.93e-18,4;CL:0002548,6.74e-12,6;CL:0002591,8.49e-09,1;CL:0000569,1.40e-08,4;CL:0000011,1.40e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000513;2.53e-24;3!UBERON:0000358;2.82e-09;1!UBERON:0010227;2.82e-09;1!UBERON:0005754;2.82e-09;1!UBERON:0010226;6.46e-09;1!UBERON:0010115;6.46e-09;1!UBERON:0005062;9.01e-09;4!UBERON:0007284;9.01e-09;4!CL:0000011;1.63e-08;4 | |||
|ontology_enrichment_disease=DOID:114!6.97e-07!2 | |ontology_enrichment_disease=DOID:114!6.97e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;3.56e-17;2!DOID:178;2.21e-09;1!DOID:326;2.21e-09;1!DOID:3978;2.21e-09;1!DOID:3394;2.21e-09;1!DOID:5844;2.21e-09;1!DOID:1287;4.92e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.57e-17,2;DOID:178,2.22e-09,1;DOID:326,2.22e-09,1;DOID:3978,2.22e-09,1;DOID:3394,2.22e-09,1;DOID:5844,2.22e-09,1;DOID:1287,4.92e-09,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;4.51e-76;25!UBERON:0000948;1.63e-56;22!UBERON:0004151;3.75e-24;3!UBERON:0002081;5.30e-17;2!UBERON:0002133;1.22e-16;2!UBERON:0003978;2.09e-11;3!UBERON:0000946;2.09e-11;3!UBERON:0003103;3.38e-11;61!UBERON:0002134;1.88e-09;1!UBERON:0005208;1.88e-09;1!UBERON:0004145;1.88e-09;1!UBERON:0005946;1.88e-09;1!UBERON:0005965;1.88e-09;1!UBERON:0002078;1.88e-09;1!UBERON:0002079;2.82e-09;1!UBERON:0000998;2.82e-09;1!UBERON:0006868;2.82e-09;1!UBERON:0002363;6.46e-09;1!UBERON:0002084;6.46e-09;1!UBERON:0002135;6.46e-09;1!UBERON:0002082;6.46e-09;1!UBERON:0010313;1.64e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.21e-79,27;UBERON:0000948,6.23e-60,24;UBERON:0005498,6.23e-60,24;UBERON:0004140,6.23e-60,24;UBERON:0009881,6.23e-60,24;UBERON:0004141,6.23e-60,24;UBERON:0003084,6.23e-60,24;UBERON:0007005,6.23e-60,24;UBERON:0004139,6.23e-60,24;UBERON:0004291,6.23e-60,24;UBERON:0003103,1.50e-33,68;UBERON:0004151,3.91e-24,3;UBERON:0001009,4.66e-19,112;UBERON:0004872,5.07e-18,83;UBERON:0002081,6.23e-17,2;UBERON:0010227,6.23e-17,2;UBERON:0002133,1.00e-16,2;UBERON:0003914,7.68e-14,117;UBERON:0004535,4.57e-13,109;UBERON:0003978,1.84e-11,3;UBERON:0009751,1.84e-11,3;UBERON:0000946,1.84e-11,3;UBERON:0002523,1.84e-11,3;UBERON:0005983,1.84e-11,3;UBERON:0002165,1.84e-11,3;UBERON:0002062,1.84e-11,3;UBERON:0007280,1.84e-11,3;UBERON:0004145,2.64e-11,3;UBERON:0010314,3.46e-10,132;UBERON:0002134,2.04e-09,1;UBERON:0005208,2.04e-09,1;UBERON:0005946,2.04e-09,1;UBERON:0005965,2.04e-09,1;UBERON:0002078,2.04e-09,1;UBERON:0001048,2.40e-09,160;UBERON:0002079,3.05e-09,1;UBERON:0000998,3.31e-09,1;UBERON:0006868,3.31e-09,1;UBERON:0002135,4.91e-09,1;UBERON:0002084,5.75e-09,1;UBERON:0002082,5.75e-09,1;UBERON:0010226,5.75e-09,1;UBERON:0003081,6.21e-09,203;UBERON:0002363,9.17e-09,1;UBERON:0007645,9.17e-09,1;UBERON:0007647,9.17e-09,1;UBERON:0010115,9.17e-09,1;UBERON:0010313,1.68e-07,10;UBERON:0002342,1.68e-07,10;UBERON:0005062,1.68e-07,10;UBERON:0000025,3.14e-07,192;UBERON:0003498,5.31e-07,5;UBERON:0005985,5.31e-07,5 | |||
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|short_description=p@chr17:77018953..77018966,+ | |short_description=p@chr17:77018953..77018966,+ | ||
}} | }} |
Latest revision as of 22:11, 25 July 2015
Short description: | p@chr17:77018953..77018966, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77018953..77018966, + |
Coexpression cluster: | C1794_heart_Cardiac_seminal_umbilical_ductus_Smooth_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.24e-37 | 16 |
cardiac muscle cell | 3.91e-24 | 3 |
cardiac muscle myoblast | 3.91e-24 | 3 |
striated muscle cell | 2.93e-18 | 4 |
cardiac fibroblast | 6.74e-12 | 6 |
smooth muscle cell of the pulmonary artery | 8.49e-09 | 1 |
cardiac mesenchymal cell | 1.40e-08 | 4 |
migratory trunk neural crest cell | 1.40e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.57e-17 | 2 |
vascular disease | 2.22e-09 | 1 |
ischemia | 2.22e-09 | 1 |
extrinsic cardiomyopathy | 2.22e-09 | 1 |
myocardial ischemia | 2.22e-09 | 1 |
myocardial infarction | 2.22e-09 | 1 |
cardiovascular system disease | 4.92e-09 | 4 |