FFCP PHASE1:Hg19::chr17:76858299..76858316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76858299..76858316,+ | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr17:76858299..76858316,+ | |description=CAGE_peak_at_chr17:76858299..76858316,+ | ||
|id=chr17:76858299..76858316,+ | |id=chr17:76858299..76858316,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.86e-19!45;CL:0002057!3.85e-17!42;CL:0000548!7.12e-16!679;CL:0000004!7.12e-16!679;CL:0000255!7.12e-16!679;CL:0000012!7.28e-16!682;CL:0000003!1.05e-10!722;CL:0000063!1.36e-10!578;CL:0000066!1.92e-10!254;CL:0002194!3.41e-10!63;CL:0000576!3.41e-10!63;CL:0000040!3.41e-10!63;CL:0000559!3.41e-10!63;CL:0002009!2.19e-09!65;CL:0000839!2.99e-09!70;CL:0000766!3.38e-09!76;CL:0000557!6.84e-09!71 | |ontology_enrichment_celltype=CL:0000860!4.86e-19!45;CL:0002057!3.85e-17!42;CL:0000548!7.12e-16!679;CL:0000004!7.12e-16!679;CL:0000255!7.12e-16!679;CL:0000012!7.28e-16!682;CL:0000003!1.05e-10!722;CL:0000063!1.36e-10!578;CL:0000066!1.92e-10!254;CL:0002194!3.41e-10!63;CL:0000576!3.41e-10!63;CL:0000040!3.41e-10!63;CL:0000559!3.41e-10!63;CL:0002009!2.19e-09!65;CL:0000839!2.99e-09!70;CL:0000766!3.38e-09!76;CL:0000557!6.84e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-33;33!CL:0002057;3.07e-33;33!CL:0000473;1.79e-22;39!CL:0000234;1.79e-22;39!CL:0000576;3.43e-16;48!CL:0000766;6.11e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.58e-32,42;CL:0002057,9.58e-32,42;CL:0000473,1.07e-26,48;CL:0000234,1.07e-26,48;CL:0002194,1.11e-19,59;CL:0000576,1.11e-19,59;CL:0000040,1.11e-19,59;CL:0000559,1.11e-19,59;CL:0002009,8.82e-19,61;CL:0000766,2.43e-17,72;CL:0000839,8.95e-17,66;CL:0000557,2.07e-16,67;CL:0000763,5.94e-09,108;CL:0000049,5.94e-09,108;CL:0000066,8.93e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-22;42!UBERON:0008947;3.08e-13;29 | |||
|ontology_enrichment_disease=DOID:305!4.24e-10!106;DOID:0050687!4.98e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.37e-12,106;DOID:0050687,3.18e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.06e-11!448;UBERON:0004120!1.06e-11!448;UBERON:0006603!1.06e-11!448;UBERON:0001474!1.24e-08!86;UBERON:0002204!1.78e-08!167;UBERON:0002371!2.99e-08!80;UBERON:0004765!3.09e-08!101;UBERON:0001434!3.09e-08!101;UBERON:0001737!3.31e-08!9;UBERON:0000923!3.22e-07!604;UBERON:0005291!3.22e-07!604;UBERON:0006598!3.22e-07!604;UBERON:0002532!3.22e-07!604;UBERON:0000467!3.33e-07!625;UBERON:0002050!4.28e-07!605;UBERON:0005423!4.28e-07!605;UBERON:0000480!4.44e-07!626 | |ontology_enrichment_uberon=UBERON:0000926!1.06e-11!448;UBERON:0004120!1.06e-11!448;UBERON:0006603!1.06e-11!448;UBERON:0001474!1.24e-08!86;UBERON:0002204!1.78e-08!167;UBERON:0002371!2.99e-08!80;UBERON:0004765!3.09e-08!101;UBERON:0001434!3.09e-08!101;UBERON:0001737!3.31e-08!9;UBERON:0000923!3.22e-07!604;UBERON:0005291!3.22e-07!604;UBERON:0006598!3.22e-07!604;UBERON:0002532!3.22e-07!604;UBERON:0000467!3.33e-07!625;UBERON:0002050!4.28e-07!605;UBERON:0005423!4.28e-07!605;UBERON:0000480!4.44e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.62e-19;9!UBERON:0001557;7.62e-19;9!UBERON:0000072;1.28e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.37e-19,9;UBERON:0002371,8.40e-15,76;UBERON:0001474,3.76e-13,82;UBERON:0002405,1.07e-12,93;UBERON:0004765,2.62e-11,90;UBERON:0002193,7.90e-10,108;UBERON:0002390,8.79e-10,98;UBERON:0003061,8.79e-10,98;UBERON:0001557,1.38e-09,19;UBERON:0001434,1.93e-09,100;UBERON:0008947,2.99e-09,38;UBERON:0003258,2.99e-09,38;UBERON:0000072,1.02e-07,47;UBERON:0003081,2.54e-07,203 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0.446961094427288,0.872338524100369,7.59899634504932,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,1.80808358407193,0,0.487932798790507,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,1.96682138424452,0.383829398097213,1.08371286321253,0,0,0,0,0,0,2.21598163412751,1.40381113229099,0.651032612147555,0,0,0,0.290796477559129,0.755751887377619,0.727752183563449,3.71886459049095,2.46700732813095,4.95530193432166,2.58923153089935,2.56160706529101,4.7296445977717,9.99762474136194,9.68227025375739,4.06279459783025,2.82363509313907,1.63743690034707,2.02251136000576,2.14258724659632,3.53021929783703,3.19668562899521,0.989553900560148,0.797854630486527,1.27867425159808,5.22376629531451,3.40431134814684,2.4912889959823,3.26623264833766,2.60741459210101,3.69221035998698,1.21079900526674,7.36555271975129,3.79754864929061,0.633765858935825,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.567208902984407,0.443458794925128,1.05401742831751,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.838998872419812,0,1.04497483268405,0,0,0.66944122552934,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0,0.625098097988558,0,0.450445921933289,0,0,0.549605231791222,0,0,0,0,0.633152558322899,0.132409180813219,0,0.354668382198357,0,0,0.74000264525148,0,0.269421344139376,0.490385709340376,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.352303495931295,0.161872944368132,0,0.204154171254893,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.600952235626387,0.567160915800105,0.538168907066586,0.427114777637135,0.423863802319124,0,0,0.515281080091258,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,1.77460200059766,3.20310911148393,2.89213235860178,2.31617342738027,3.05031221729369,3.79632990577755,2.69662616320329,3.33576490713088,3.07797725557112,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,1.3032332212413,2.07986957055916,0,0.115930404975077,0.352226082707465,1.29929802984966,2.31492756288305,0.761016608938393,0,0,0.246217006087397,0,0,0.93733833986777,0.839910640994298,0.283550194484773,0,0,0.383382679165211,0,0,0.414656231081544,0.288239906833923,0.6312121671319,0,0,1.17217447210047,0,0.102827492703324,0,0,0.897048674762886,0.43596006883328,0.5867062865676,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.771622122786426,0,0,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0.502257091432126,0,1.4377491329495,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0.431428401637234,0,0.303127571446259,0,0.30239029332968,0.496215615637554,0,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.348631135379878,0,0,0.184161977871793,0.574072240823034,0.910455840033585,0.131124414959424,0.902399225814824,0.0770153371044148,0,0,0,1.13733384070897,1.19065593693561,1.51141141271498,1.54227252690289,0.270946437543853,1.00337954770971,0.764628819135115,0.831076008928724,0.895499018888713,0,0,0.256450125116389,0.656029291399411,0.976135183992909,0,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0,0.495854746082934,0.192190067365106,0.127612712494584,0,0,0.94443704049192,0,0.616067160352178,0.532306030317022,0,0.18532421910392,1.14499909393593,0,0.632758849437452,0.190630193923825,0.767693373934002,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.404364963146632,3.17020642346017,0,0.975267478179181,0.487426979262569,0,0.545999645631943,0.141405431953713,0,1.10273068709225,0.66343897524122,0,0.578775534266688,0,1.01455188481352,0,0,0.286822704408103,0,1.07001315444375,0.709522128141196,0.211107635297664,0.329294892959902,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.439524537815682,0,0,0.568272293612826,0,0,0.307160702099232,0,0.140669416410513,0.333926115068718,0,0,0,0,0,1.22722419002586,0,0,1.52776196950456,3.22238114416096,0,0,0,0,0,0,0,1.04171104434093,0.0874599999961957,1.44999915086959,0.341380344856499,1.5255219017566,0.472775363535873,0,0,0,0,0,0,0,0,0,1.30726156222788,0,0,0.22788411169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| ||
|short_description=p@chr17:76858299..76858316,+ | |short_description=p@chr17:76858299..76858316,+ | ||
}} | }} |
Latest revision as of 22:09, 25 July 2015
Short description: | p@chr17:76858299..76858316, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76858299..76858316, + |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.58e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.58e-32 | 42 |
defensive cell | 1.07e-26 | 48 |
phagocyte | 1.07e-26 | 48 |
monopoietic cell | 1.11e-19 | 59 |
monocyte | 1.11e-19 | 59 |
monoblast | 1.11e-19 | 59 |
promonocyte | 1.11e-19 | 59 |
macrophage dendritic cell progenitor | 8.82e-19 | 61 |
myeloid leukocyte | 2.43e-17 | 72 |
myeloid lineage restricted progenitor cell | 8.95e-17 | 66 |
granulocyte monocyte progenitor cell | 2.07e-16 | 67 |
myeloid cell | 5.94e-09 | 108 |
common myeloid progenitor | 5.94e-09 | 108 |
epithelial cell | 8.93e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.37e-19 | 9 |
bone marrow | 8.40e-15 | 76 |
bone element | 3.76e-13 | 82 |
immune system | 1.07e-12 | 93 |
skeletal element | 2.62e-11 | 90 |
hemolymphoid system | 7.90e-10 | 108 |
hematopoietic system | 8.79e-10 | 98 |
blood island | 8.79e-10 | 98 |
upper respiratory tract | 1.38e-09 | 19 |
skeletal system | 1.93e-09 | 100 |
respiratory primordium | 2.99e-09 | 38 |
endoderm of foregut | 2.99e-09 | 38 |
segment of respiratory tract | 1.02e-07 | 47 |
lateral plate mesoderm | 2.54e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.37e-12 | 106 |
cell type cancer | 3.18e-10 | 143 |