FFCP PHASE1:Hg19::chr17:7491787..7491799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7491787..7491799,- | |||
|coexpression_cluster_id=C3585 | |||
|description=CAGE_peak_at_chr17:7491787..7491799,- | |description=CAGE_peak_at_chr17:7491787..7491799,- | ||
|id=chr17:7491787..7491799,- | |id=chr17:7491787..7491799,- | ||
|ontology_enrichment_celltype=CL:0002076!1.78e-08!43;CL:0002368!6.40e-08!13 | |ontology_enrichment_celltype=CL:0002076!1.78e-08!43;CL:0002368!6.40e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.57e-13;42!CL:0002368;2.17e-11;13!CL:0002159;4.14e-11;14!CL:0000575;9.79e-10;2!CL:0002231;2.76e-07;3!CL:0000240;2.85e-07;6!CL:0000311;2.85e-07;6!CL:0000079;2.85e-07;6!CL:0000237;2.85e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.24e-15,42;CL:0002368,1.41e-11,13;CL:0002159,4.16e-11,14;CL:0000223,5.45e-10,58;CL:0000575,9.21e-10,2;CL:0000240,2.49e-07,6;CL:0000311,2.49e-07,6;CL:0000079,2.49e-07,6;CL:0000237,2.49e-07,6;CL:0000036,2.49e-07,6;CL:0000357,2.49e-07,6;CL:0000114,2.49e-07,6;CL:0002231,2.77e-07,3;CL:0000066,4.41e-07,253;CL:0002328,9.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.85e-07;6!CL:0000114;2.85e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!8.89e-10!14 | |ontology_enrichment_disease=DOID:1749!8.89e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.74e-18!57;UBERON:0005068!5.74e-18!57;UBERON:0006241!5.74e-18!57;UBERON:0007135!5.74e-18!57;UBERON:0002780!6.00e-16!41;UBERON:0001890!6.00e-16!41;UBERON:0006240!6.00e-16!41;UBERON:0001017!1.14e-15!82;UBERON:0000924!1.57e-15!173;UBERON:0006601!1.57e-15!173;UBERON:0003080!2.24e-15!42;UBERON:0004121!6.53e-15!169;UBERON:0002020!1.65e-14!34;UBERON:0003528!1.65e-14!34;UBERON:0005743!2.22e-14!86;UBERON:0001893!2.61e-14!34;UBERON:0000153!3.21e-14!129;UBERON:0007811!3.21e-14!129;UBERON:0001869!4.54e-14!32;UBERON:0002619!6.67e-14!22;UBERON:0002616!9.94e-14!59;UBERON:0002791!9.98e-14!33;UBERON:0007023!1.29e-13!115;UBERON:0000033!3.06e-13!123;UBERON:0001950!4.77e-12!20;UBERON:0000073!6.55e-12!94;UBERON:0001016!6.55e-12!94;UBERON:0000955!6.56e-12!69;UBERON:0006238!6.56e-12!69;UBERON:0002346!1.05e-11!90;UBERON:0000956!1.12e-11!25;UBERON:0000203!1.12e-11!25;UBERON:0003075!3.93e-11!86;UBERON:0007284!3.93e-11!86;UBERON:0003056!3.35e-10!61;UBERON:0000922!1.40e-09!612;UBERON:0000064!1.60e-08!219;UBERON:0000468!1.14e-07!659;UBERON:0000062!1.17e-07!511;UBERON:0000475!1.35e-07!365;UBERON:0002050!2.23e-07!605;UBERON:0005423!2.23e-07!605;UBERON:0001871!2.48e-07!7;UBERON:0001004!3.91e-07!72;UBERON:0000923!4.76e-07!604;UBERON:0005291!4.76e-07!604;UBERON:0006598!4.76e-07!604;UBERON:0002532!4.76e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.48e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,6.05e-07,104;UBERON:0004121,6.94e-07,171;UBERON:0000924,6.94e-07,171;UBERON:0006601,6.94e-07,171;UBERON:0001950,7.19e-07,20;UBERON:0004815,9.83e-07,3;UBERON:0002031,9.83e-07,3 | |||
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| ||
|short_description=p@chr17:7491787..7491799,- | |short_description=p@chr17:7491787..7491799,- | ||
}} | }} |
Latest revision as of 21:37, 25 July 2015
Short description: | p@chr17:7491787..7491799, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7491787..7491799, - |
Coexpression cluster: | C3585_Prostate_Sebocyte_oral_Small_Keratinocyte_Tracheal_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.24e-15 | 42 |
respiratory epithelial cell | 1.41e-11 | 13 |
general ecto-epithelial cell | 4.16e-11 | 14 |
endodermal cell | 5.45e-10 | 58 |
corneal epithelial cell | 9.21e-10 | 2 |
stratified squamous epithelial cell | 2.49e-07 | 6 |
keratin accumulating cell | 2.49e-07 | 6 |
stratified epithelial cell | 2.49e-07 | 6 |
keratinizing barrier epithelial cell | 2.49e-07 | 6 |
epithelial fate stem cell | 2.49e-07 | 6 |
stratified epithelial stem cell | 2.49e-07 | 6 |
surface ectodermal cell | 2.49e-07 | 6 |
epithelial cell of prostate | 2.77e-07 | 3 |
epithelial cell | 4.41e-07 | 253 |
bronchial epithelial cell | 9.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 6.05e-07 | 104 |
ectoderm-derived structure | 6.94e-07 | 171 |
ectoderm | 6.94e-07 | 171 |
presumptive ectoderm | 6.94e-07 | 171 |
neocortex | 7.19e-07 | 20 |
lower respiratory tract epithelium | 9.83e-07 | 3 |
epithelium of bronchus | 9.83e-07 | 3 |