FFCP PHASE1:Hg19::chr17:7339530..7339542,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7339530..7339542,+ | |||
|description=CAGE_peak_at_chr17:7339530..7339542,+ | |description=CAGE_peak_at_chr17:7339530..7339542,+ | ||
|id=chr17:7339530..7339542,+ | |id=chr17:7339530..7339542,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.35e-13!254;CL:0002076!8.14e-12!43;CL:0002368!4.02e-08!13;CL:0000990!4.49e-08!8;CL:0000223!8.95e-08!59;CL:0000063!3.20e-07!578 | |ontology_enrichment_celltype=CL:0000066!1.35e-13!254;CL:0002076!8.14e-12!43;CL:0002368!4.02e-08!13;CL:0000990!4.49e-08!8;CL:0000223!8.95e-08!59;CL:0000063!3.20e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002368;6.87e-19;13!CL:0000875;1.44e-17;3!CL:0002396;1.44e-17;3!CL:0002076;7.68e-15;42!CL:0001014;7.01e-12;2!CL:0001016;7.01e-12;2!CL:0002202;1.41e-09;9!CL:0002632;1.41e-09;9!CL:0002159;2.89e-09;14!CL:0000840;1.36e-08;5!CL:0002393;1.36e-08;6!CL:0002397;1.36e-08;6!CL:0002166;3.36e-08;3!CL:0000307;4.16e-08;3!CL:0002621;4.16e-08;3!CL:0002328;7.18e-08;3!CL:0002252;6.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.94e-21,9;CL:0002397,1.94e-21,9;CL:0002368,1.09e-18,13;CL:0002076,1.57e-18,42;CL:0000875,1.49e-17,3;CL:0002396,1.49e-17,3;CL:0000223,1.10e-12,58;CL:0001014,4.19e-12,2;CL:0001016,4.19e-12,2;CL:0002202,1.75e-09,9;CL:0002632,1.75e-09,9;CL:0002159,2.45e-09,14;CL:0000840,9.10e-09,5;CL:0001029,9.10e-09,5;CL:0000066,1.62e-08,253;CL:0002166,3.43e-08,3;CL:0002621,3.55e-08,3;CL:0000068,4.72e-08,3;CL:0000069,4.72e-08,3;CL:0000307,4.72e-08,3;CL:0000377,4.72e-08,3;CL:0002328,8.88e-08,3;CL:0002252,7.19e-07,1;CL:0000313,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;2.27e-08;58!CL:0000377;4.16e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.97e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.16e-08;3!UBERON:0004815;7.18e-08;3!UBERON:0002031;7.18e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.55e-08,3;UBERON:0004815,8.88e-08,3;UBERON:0002031,8.88e-08,3;UBERON:0004911,8.97e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0,0,1.50602959389125,1.10926203050036,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,1.69004229049553,3.82687739937078,1.04829322754188,0.22465726229299,0,0.16072558669708,3.42015292489498,2.58591680358817,3.10529061399878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.822405995998037,0.167186495390678,0.651844533267181,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0.604820229674197,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,1.11235332835329,0.97364218096405,1.56716763569341,0.797747763113191,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,2.18047026071267,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,2.51239109112286,0.545492241181669,1.43402297694502,0,0.662648841607426,0.348581828608555,0.414644220061482,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0.368965315629341,0,1.64625428112938,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0.492434012174795,0,0.148631162288728,3.74935335947108,1.34385702559088,0.992425680696705,0.179117045405697,0,1.15014803749563,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,3.40860999515584,0.460404944679482,0,0,0,0,0.308061348417659,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0,0,0,0.501689773854853,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0,0,1.32227932288782,1.34533047155574,1.27612712494584,0.4046311234222,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,2.17781969722645,0,2.15252686335615,0,0.886860307073351,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,8.44017044713844,0,0.228234679033192,0.47003968731907,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,1.365521379426,0,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0.651884231532048,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0.364909578431332,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.685946781900644,0.870592065804026,0,0.687944129886466,0.19351266257817,0,0,0.193978032976839,0,0,0,0,0,0.586654148204409,0.240476460754601,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.275078873194468,0,1.5748172408605,3.86900977278975,0,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.82092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,1.22368352253234,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.664324201566815,0.327130788511688,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0.788617450012533,0,0,0,0,0,0,0,0,0,0,0,2.25739752552359,0,0.733714394086716,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0.527613733078862,1.14986184875636,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.560544326627578,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0.414432328326074,0.17071847709395,0,0,0,0.170426809518315,0,0,0,0,1.78968690876468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0,0.128915775947154,0,0,0.705789743431384,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.253397002022874,0.203977659483963,0,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0.814032686109745,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0,0,1.50602959389125,1.10926203050036,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,1.69004229049553,3.82687739937078,1.04829322754188,0.22465726229299,0,0.16072558669708,3.42015292489498,2.58591680358817,3.10529061399878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.822405995998037,0.167186495390678,0.651844533267181,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0.604820229674197,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,1.11235332835329,0.97364218096405,1.56716763569341,0.797747763113191,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,2.18047026071267,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,2.51239109112286,0.545492241181669,1.43402297694502,0,0.662648841607426,0.348581828608555,0.414644220061482,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0.368965315629341,0,1.64625428112938,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0.492434012174795,0,0.148631162288728,3.74935335947108,1.34385702559088,0.992425680696705,0.179117045405697,0,1.15014803749563,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,3.40860999515584,0.460404944679482,0,0,0,0,0.308061348417659,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0,0,0,0.501689773854853,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0,0,1.32227932288782,1.34533047155574,1.27612712494584,0.4046311234222,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,2.17781969722645,0,2.15252686335615,0,0.886860307073351,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,8.44017044713844,0,0.228234679033192,0.47003968731907,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,1.365521379426,0,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0.651884231532048,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0.364909578431332,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.685946781900644,0.870592065804026,0,0.687944129886466,0.19351266257817,0,0,0.193978032976839,0,0,0,0,0,0.586654148204409,0.240476460754601,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.275078873194468,0,1.5748172408605,3.86900977278975,0,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.82092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,1.22368352253234,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.664324201566815,0.327130788511688,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0.788617450012533,0,0,0,0,0,0,0,0,0,0,0,2.25739752552359,0,0.733714394086716,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0.527613733078862,1.14986184875636,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.560544326627578,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0.414432328326074,0.17071847709395,0,0,0,0.170426809518315,0,0,0,0,1.78968690876468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0,0.128915775947154,0,0,0.705789743431384,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.253397002022874,0.203977659483963,0,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0.814032686109745,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | ||
|short_description=p@chr17:7339530..7339542,+ | |short_description=p@chr17:7339530..7339542,+ | ||
}} | }} |
Latest revision as of 21:05, 25 July 2015
Short description: | p@chr17:7339530..7339542, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7339530..7339542, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.94e-21 | 9 |
CD14-positive, CD16-positive monocyte | 1.94e-21 | 9 |
respiratory epithelial cell | 1.09e-18 | 13 |
endo-epithelial cell | 1.57e-18 | 42 |
non-classical monocyte | 1.49e-17 | 3 |
CD14-low, CD16-positive monocyte | 1.49e-17 | 3 |
endodermal cell | 1.10e-12 | 58 |
CD1a-positive Langerhans cell | 4.19e-12 | 2 |
immature CD1a-positive Langerhans cell | 4.19e-12 | 2 |
epithelial cell of tracheobronchial tree | 1.75e-09 | 9 |
epithelial cell of lower respiratory tract | 1.75e-09 | 9 |
general ecto-epithelial cell | 2.45e-09 | 14 |
immature conventional dendritic cell | 9.10e-09 | 5 |
common dendritic progenitor | 9.10e-09 | 5 |
epithelial cell | 1.62e-08 | 253 |
epithelial cell of Malassez | 3.43e-08 | 3 |
gingival epithelial cell | 3.55e-08 | 3 |
duct epithelial cell | 4.72e-08 | 3 |
branched duct epithelial cell | 4.72e-08 | 3 |
tracheal epithelial cell | 4.72e-08 | 3 |
tracheoblast | 4.72e-08 | 3 |
bronchial epithelial cell | 8.88e-08 | 3 |
epithelial cell of esophagus | 7.19e-07 | 1 |
serous secreting cell | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.55e-08 | 3 |
lower respiratory tract epithelium | 8.88e-08 | 3 |
epithelium of bronchus | 8.88e-08 | 3 |
epithelium of female gonad | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.97e-07 | 1 |