FFCP PHASE1:Hg19::chr17:73230882..73230886,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73230882..73230886,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr17:73230882..73230886,+ | |description=CAGE_peak_at_chr17:73230882..73230886,+ | ||
|id=chr17:73230882..73230886,+ | |id=chr17:73230882..73230886,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;4.55e-07;2!CL:1000398;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,4.69e-07,2;CL:1000398,4.69e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.12e-08!15;UBERON:0000179!2.12e-08!15;UBERON:0000463!2.12e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.68e-63;15!UBERON:0000179;5.68e-63;15!UBERON:0000463;5.68e-63;15!UBERON:0002390;3.46e-33;32!UBERON:0002193;4.17e-19;42!UBERON:0007195;7.24e-13;1!UBERON:0003513;1.63e-07;7!UBERON:0004535;2.37e-07;109!UBERON:0001281;4.55e-07;2!UBERON:0003497;4.55e-07;2!UBERON:0003909;4.55e-07;2!UBERON:0003835;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.69e-63,15;UBERON:0000179,5.69e-63,15;UBERON:0000463,5.69e-63,15;UBERON:0004535,5.37e-14,109;UBERON:0001009,1.41e-13,112;UBERON:0007023,2.33e-13,114;UBERON:0007195,9.73e-13,1;UBERON:0002390,1.03e-10,98;UBERON:0003061,1.03e-10,98;UBERON:0002193,1.31e-09,108;UBERON:0003081,1.97e-09,203;UBERON:0000926,1.74e-07,315;UBERON:0004120,1.74e-07,315;UBERON:0006603,1.74e-07,315;UBERON:0003513,1.86e-07,7;UBERON:0001281,4.69e-07,2;UBERON:0003497,4.69e-07,2;UBERON:0003909,4.69e-07,2;UBERON:0003835,4.69e-07,2;UBERON:0000473,9.38e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.229240217243854,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0.434377689410233,0,0.368277635987565,0.949387162322653,0,0,0.419317291016752,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0.522870902049801,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,6.08937131078603,11.4695581071356,2.84823593587081,2.85878130549347,3.29089818468955,7.13320642311989,3.7802200606668,3.17250070517708,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0.358042349351218,0,0,7.18449277040819,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0,0,0,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,1.66713136080127,1.60778478093707,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0.143444410785353,0,0.325613074443898,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.229240217243854,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0.434377689410233,0,0.368277635987565,0.949387162322653,0,0,0.419317291016752,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0.522870902049801,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,6.08937131078603,11.4695581071356,2.84823593587081,2.85878130549347,3.29089818468955,7.13320642311989,3.7802200606668,3.17250070517708,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0.358042349351218,0,0,7.18449277040819,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0,0,0,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,1.66713136080127,1.60778478093707,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0.143444410785353,0,0.325613074443898,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr17:73230882..73230886,+ | |short_description=p@chr17:73230882..73230886,+ | ||
}} | }} |
Latest revision as of 21:03, 25 July 2015
Short description: | p@chr17:73230882..73230886, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73230882..73230886, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 4.69e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.69e-63 | 15 |
haemolymphatic fluid | 5.69e-63 | 15 |
organism substance | 5.69e-63 | 15 |
cardiovascular system | 5.37e-14 | 109 |
circulatory system | 1.41e-13 | 112 |
adult organism | 2.33e-13 | 114 |
stroma of bone marrow | 9.73e-13 | 1 |
hematopoietic system | 1.03e-10 | 98 |
blood island | 1.03e-10 | 98 |
hemolymphoid system | 1.31e-09 | 108 |
lateral plate mesoderm | 1.97e-09 | 203 |
mesoderm | 1.74e-07 | 315 |
mesoderm-derived structure | 1.74e-07 | 315 |
presumptive mesoderm | 1.74e-07 | 315 |
trunk blood vessel | 1.86e-07 | 7 |
hepatic sinusoid | 4.69e-07 | 2 |
abdomen blood vessel | 4.69e-07 | 2 |
sinusoid | 4.69e-07 | 2 |
abdominal segment blood vessel | 4.69e-07 | 2 |
testis | 9.38e-07 | 8 |