FFCP PHASE1:Hg19::chr17:7183607..7183612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7183607..7183612,- | |||
|coexpression_cluster_id=C120 | |coexpression_cluster_id=C120 | ||
|description=CAGE_peak_at_chr17:7183607..7183612,- | |description=CAGE_peak_at_chr17:7183607..7183612,- | ||
|id=chr17:7183607..7183612,- | |id=chr17:7183607..7183612,- | ||
|ontology_enrichment_celltype=CL:0002076!3.12e-19!43;CL:0002368!1.68e-18!13;CL:0000223!2.96e-16!59;CL:0000066!3.73e-14!254;CL:0000068!1.91e-10!3;CL:0000069!1.91e-10!3;CL:0000307!1.91e-10!3;CL:0000377!1.91e-10!3;CL:0002202!4.36e-09!9;CL:0002632!4.36e-09!9;CL:0000076!3.92e-08!62;CL:0001014!8.69e-08!2;CL:0001016!8.69e-08!2;CL:0000039!2.39e-07!7;CL:0000586!2.39e-07!7 | |ontology_enrichment_celltype=CL:0002076!3.12e-19!43;CL:0002368!1.68e-18!13;CL:0000223!2.96e-16!59;CL:0000066!3.73e-14!254;CL:0000068!1.91e-10!3;CL:0000069!1.91e-10!3;CL:0000307!1.91e-10!3;CL:0000377!1.91e-10!3;CL:0002202!4.36e-09!9;CL:0002632!4.36e-09!9;CL:0000076!3.92e-08!62;CL:0001014!8.69e-08!2;CL:0001016!8.69e-08!2;CL:0000039!2.39e-07!7;CL:0000586!2.39e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.27e-19;3!CL:0002368;1.08e-17;13!CL:1001319;8.63e-16;1!CL:1000600;8.63e-16;1!CL:0002202;8.27e-15;9!CL:0002632;8.27e-15;9!CL:0002076;5.71e-10;42!CL:0001014;1.20e-08;2!CL:0001016;1.20e-08;2!CL:0002251;4.71e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.27e-19,3;CL:0000069,1.27e-19,3;CL:0000307,1.27e-19,3;CL:0000377,1.27e-19,3;CL:0002368,9.94e-18,13;CL:0002076,4.07e-16,42;CL:1001319,8.63e-16,1;CL:1000600,8.63e-16,1;CL:0002202,8.27e-15,9;CL:0002632,8.27e-15,9;CL:0000223,1.54e-11,58;CL:0001014,1.20e-08,2;CL:0001016,1.20e-08,2;CL:0002251,4.81e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000377;1.27e-19;3!UBERON:0008814;1.39e-08;2!UBERON:0010056;1.39e-08;2!CL:0000223;1.13e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!3.27e-26!14;DOID:305!3.50e-12!106;DOID:0050687!3.90e-09!143;DOID:4074!2.08e-07!2;DOID:4905!2.08e-07!2;DOID:3498!2.08e-07!2 | |ontology_enrichment_disease=DOID:1749!3.27e-26!14;DOID:305!3.50e-12!106;DOID:0050687!3.90e-09!143;DOID:4074!2.08e-07!2;DOID:4905!2.08e-07!2;DOID:3498!2.08e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-25;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.62e-25,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.85e-16!5;UBERON:0003343!1.47e-13!4;UBERON:0004785!1.47e-13!4;UBERON:0000344!1.65e-12!12;UBERON:0000974!7.40e-11!10;UBERON:0001004!1.77e-08!72;UBERON:0004119!2.61e-07!169;UBERON:0000925!2.61e-07!169;UBERON:0006595!2.61e-07!169;UBERON:0000065!3.69e-07!53 | |ontology_enrichment_uberon=UBERON:0003729!1.85e-16!5;UBERON:0003343!1.47e-13!4;UBERON:0004785!1.47e-13!4;UBERON:0000344!1.65e-12!12;UBERON:0000974!7.40e-11!10;UBERON:0001004!1.77e-08!72;UBERON:0004119!2.61e-07!169;UBERON:0000925!2.61e-07!169;UBERON:0006595!2.61e-07!169;UBERON:0000065!3.69e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;7.68e-33;4!UBERON:0004785;7.68e-33;4!UBERON:0000974;3.77e-22;6!UBERON:0004645;8.63e-16;1!UBERON:0001256;8.63e-16;1!UBERON:0001259;8.63e-16;1!UBERON:0000344;8.30e-12;20!UBERON:0003729;1.44e-10;13!UBERON:0007196;4.01e-09;15!UBERON:0001558;4.01e-09;15!UBERON:0003126;5.82e-09;7!UBERON:0001005;5.82e-09;7!UBERON:0001255;1.50e-08;2!UBERON:0001556;1.50e-08;2!UBERON:0000161;2.13e-07;19!UBERON:0000166;2.13e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.57e-33,4;UBERON:0004785,8.57e-33,4;UBERON:0004645,8.63e-16,1;UBERON:0001256,8.63e-16,1;UBERON:0001259,8.63e-16,1;UBERON:0000974,1.54e-13,10;UBERON:0000344,8.54e-12,20;UBERON:0003729,1.49e-10,13;UBERON:0007196,4.01e-09,15;UBERON:0001558,4.01e-09,15;UBERON:0003126,5.82e-09,7;UBERON:0001005,5.82e-09,7;UBERON:0001004,6.24e-09,74;UBERON:0001255,1.50e-08,2;UBERON:0001556,1.50e-08,2 | |||
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| ||
|short_description=p@chr17:7183607..7183612,- | |short_description=p@chr17:7183607..7183612,- | ||
}} | }} |
Latest revision as of 20:43, 25 July 2015
Short description: | p@chr17:7183607..7183612, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7183607..7183612, - |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.27e-19 | 3 |
branched duct epithelial cell | 1.27e-19 | 3 |
tracheal epithelial cell | 1.27e-19 | 3 |
tracheoblast | 1.27e-19 | 3 |
respiratory epithelial cell | 9.94e-18 | 13 |
endo-epithelial cell | 4.07e-16 | 42 |
bladder cell | 8.63e-16 | 1 |
lower urinary tract cell | 8.63e-16 | 1 |
epithelial cell of tracheobronchial tree | 8.27e-15 | 9 |
epithelial cell of lower respiratory tract | 8.27e-15 | 9 |
endodermal cell | 1.54e-11 | 58 |
CD1a-positive Langerhans cell | 1.20e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.20e-08 | 2 |
epithelial cell of alimentary canal | 4.81e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.57e-33 | 4 |
respiratory system mucosa | 8.57e-33 | 4 |
urinary bladder urothelium | 8.63e-16 | 1 |
wall of urinary bladder | 8.63e-16 | 1 |
mucosa of urinary bladder | 8.63e-16 | 1 |
neck | 1.54e-13 | 10 |
mucosa | 8.54e-12 | 20 |
mouth mucosa | 1.49e-10 | 13 |
tracheobronchial tree | 4.01e-09 | 15 |
lower respiratory tract | 4.01e-09 | 15 |
trachea | 5.82e-09 | 7 |
respiratory airway | 5.82e-09 | 7 |
respiratory system | 6.24e-09 | 74 |
urinary bladder | 1.50e-08 | 2 |
lower urinary tract | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.62e-25 | 14 |