FFCP PHASE1:Hg19::chr17:7040609..7040638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7040609..7040638,+ | |||
|coexpression_cluster_id=C2433 | |||
|description=CAGE_peak_at_chr17:7040609..7040638,+ | |||
|id=chr17:7040609..7040638,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.03e-74!63;CL:0000576!3.03e-74!63;CL:0000040!3.03e-74!63;CL:0000559!3.03e-74!63;CL:0002057!4.95e-72!42;CL:0002009!1.42e-71!65;CL:0000860!1.80e-66!45;CL:0000839!1.47e-65!70;CL:0000766!2.54e-65!76;CL:0000557!1.85e-64!71;CL:0002087!4.72e-46!119;CL:0000763!7.45e-42!112;CL:0000049!7.45e-42!112;CL:0000738!1.53e-40!140;CL:0002031!6.61e-38!124;CL:0000037!1.48e-31!172;CL:0000566!1.48e-31!172;CL:0002032!4.20e-29!165;CL:0000837!4.20e-29!165;CL:0000988!5.41e-29!182;CL:0002393!1.52e-12!9;CL:0002397!1.52e-12!9;CL:0002619!8.84e-09!3;CL:0000134!2.84e-08!358;CL:0000842!5.48e-08!3;CL:0002320!7.37e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.79e-37;39!CL:0000234;3.79e-37;39!CL:0000576;9.96e-34;48!CL:0000860;4.19e-31;33!CL:0002057;4.19e-31;33!CL:0000766;1.33e-22;69!CL:0002619;3.03e-17;3!CL:0000235;1.70e-14;6!CL:0002393;2.61e-14;6!CL:0002397;2.61e-14;6!CL:0000763;1.96e-13;100!CL:0002087;2.80e-08;104!CL:0000738;2.81e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.92e-56,59;CL:0000576,4.92e-56,59;CL:0000040,4.92e-56,59;CL:0000559,4.92e-56,59;CL:0000473,4.88e-55,48;CL:0000234,4.88e-55,48;CL:0002009,4.73e-54,61;CL:0000839,1.31e-49,66;CL:0000766,7.40e-49,72;CL:0000557,8.43e-49,67;CL:0000860,6.68e-43,42;CL:0002057,6.68e-43,42;CL:0000763,7.34e-31,108;CL:0000049,7.34e-31,108;CL:0002087,1.28e-28,115;CL:0000738,2.13e-25,136;CL:0002031,5.12e-25,120;CL:0000037,1.74e-19,168;CL:0002032,6.58e-19,161;CL:0000837,6.58e-19,161;CL:0000988,3.32e-18,177;CL:0002619,2.36e-17,3;CL:0000235,2.04e-14,6;CL:0002393,1.40e-09,9;CL:0002397,1.40e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.78e-30;42!CL:0000049;5.55e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-78!102;UBERON:0003061!1.49e-78!102;UBERON:0002193!4.20e-75!112;UBERON:0002371!9.12e-56!80;UBERON:0001474!5.64e-51!86;UBERON:0002405!1.00e-45!115;UBERON:0004765!1.78e-41!101;UBERON:0001434!1.78e-41!101;UBERON:0003081!9.51e-30!216;UBERON:0000178!2.54e-22!15;UBERON:0000179!2.54e-22!15;UBERON:0000463!2.54e-22!15;UBERON:0002204!4.56e-21!167;UBERON:0000926!5.50e-11!448;UBERON:0004120!5.50e-11!448;UBERON:0006603!5.50e-11!448;UBERON:0002384!8.44e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.96e-28;15!UBERON:0000179;5.96e-28;15!UBERON:0000463;5.96e-28;15!UBERON:0002390;1.40e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.69e-61,98;UBERON:0003061,2.69e-61,98;UBERON:0002193,4.24e-55,108;UBERON:0002371,1.86e-42,76;UBERON:0001474,5.43e-39,82;UBERON:0004765,4.42e-35,90;UBERON:0002405,8.72e-34,93;UBERON:0001434,4.61e-31,100;UBERON:0000178,5.17e-28,15;UBERON:0000179,5.17e-28,15;UBERON:0000463,5.17e-28,15;UBERON:0003081,1.79e-26,203;UBERON:0002204,1.79e-16,167;UBERON:0000926,9.08e-15,315;UBERON:0004120,9.08e-15,315;UBERON:0006603,9.08e-15,315 | |||
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| ||
|short_description=p@chr17:7040609..7040638,+ | |||
}} | }} |
Latest revision as of 20:33, 25 July 2015
Short description: | p@chr17:7040609..7040638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7040609..7040638, + |
Coexpression cluster: | C2433_CD14_neuroectodermal_Whole_Macrophage_Peripheral_blood_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.92e-56 | 59 |
monocyte | 4.92e-56 | 59 |
monoblast | 4.92e-56 | 59 |
promonocyte | 4.92e-56 | 59 |
defensive cell | 4.88e-55 | 48 |
phagocyte | 4.88e-55 | 48 |
macrophage dendritic cell progenitor | 4.73e-54 | 61 |
myeloid lineage restricted progenitor cell | 1.31e-49 | 66 |
myeloid leukocyte | 7.40e-49 | 72 |
granulocyte monocyte progenitor cell | 8.43e-49 | 67 |
classical monocyte | 6.68e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.68e-43 | 42 |
myeloid cell | 7.34e-31 | 108 |
common myeloid progenitor | 7.34e-31 | 108 |
nongranular leukocyte | 1.28e-28 | 115 |
leukocyte | 2.13e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 5.12e-25 | 120 |
hematopoietic stem cell | 1.74e-19 | 168 |
hematopoietic oligopotent progenitor cell | 6.58e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.58e-19 | 161 |
hematopoietic cell | 3.32e-18 | 177 |
adult endothelial progenitor cell | 2.36e-17 | 3 |
macrophage | 2.04e-14 | 6 |
intermediate monocyte | 1.40e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.40e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.69e-61 | 98 |
blood island | 2.69e-61 | 98 |
hemolymphoid system | 4.24e-55 | 108 |
bone marrow | 1.86e-42 | 76 |
bone element | 5.43e-39 | 82 |
skeletal element | 4.42e-35 | 90 |
immune system | 8.72e-34 | 93 |
skeletal system | 4.61e-31 | 100 |
blood | 5.17e-28 | 15 |
haemolymphatic fluid | 5.17e-28 | 15 |
organism substance | 5.17e-28 | 15 |
lateral plate mesoderm | 1.79e-26 | 203 |
musculoskeletal system | 1.79e-16 | 167 |
mesoderm | 9.08e-15 | 315 |
mesoderm-derived structure | 9.08e-15 | 315 |
presumptive mesoderm | 9.08e-15 | 315 |