FFCP PHASE1:Hg19::chr17:65240926..65240938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:65240926..65240938,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr17:65240926..65240938,+ | |description=CAGE_peak_at_chr17:65240926..65240938,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;7.06e-34;1!CL:0002625;7.06e-34;1!CL:0002581;7.06e-34;1!CL:0000216;7.06e-34;1!CL:0000097;7.01e-08;5!CL:0000154;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0000511;7.06e-34;1!CL:0002625;7.06e-34;1!CL:0002581;7.06e-34;1!CL:0000216;7.06e-34;1!CL:0000097;7.01e-08;5!CL:0000154;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.05e-34,1;CL:0002625,5.05e-34,1;CL:0000216,5.05e-34,1;CL:0002581,7.06e-34,1;CL:0000097,7.49e-08,5;CL:0002028,7.49e-08,5;CL:0000154,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.17e-38;8!UBERON:0001136;7.06e-34;1!UBERON:0001343;7.06e-34;1!UBERON:0004910;7.06e-34;1!UBERON:0004813;7.06e-34;1!UBERON:0003135;9.75e-28;11!UBERON:0004909;1.07e-17;2!UBERON:0005406;1.07e-17;2!UBERON:0000991;5.94e-15;21!UBERON:0003101;2.61e-14;22!UBERON:0000079;2.61e-14;22!UBERON:0005904;1.57e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0000473;9.17e-38;8!UBERON:0001136;7.06e-34;1!UBERON:0001343;7.06e-34;1!UBERON:0004910;7.06e-34;1!UBERON:0004813;7.06e-34;1!UBERON:0003135;9.75e-28;11!UBERON:0004909;1.07e-17;2!UBERON:0005406;1.07e-17;2!UBERON:0000991;5.94e-15;21!UBERON:0003101;2.61e-14;22!UBERON:0000079;2.61e-14;22!UBERON:0005904;1.57e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.09e-38,8;UBERON:0001136,5.05e-34,1;UBERON:0001343,5.05e-34,1;UBERON:0004910,5.05e-34,1;UBERON:0005154,5.05e-34,1;UBERON:0005295,5.05e-34,1;UBERON:0004813,5.05e-34,1;UBERON:0005297,5.05e-34,1;UBERON:0005294,5.05e-34,1;UBERON:0010141,5.05e-34,1;UBERON:0005891,5.05e-34,1;UBERON:0003135,8.90e-28,11;UBERON:0004909,9.07e-18,2;UBERON:0005406,1.07e-17,2;UBERON:0000991,5.66e-15,21;UBERON:0009196,5.66e-15,21;UBERON:0009117,5.66e-15,21;UBERON:0005564,5.66e-15,21;UBERON:0004176,2.49e-14,22;UBERON:0003101,2.49e-14,22;UBERON:0000079,2.49e-14,22;UBERON:0005904,1.44e-09,4;UBERON:0002323,3.12e-07,46;UBERON:0003133,5.88e-07,48;UBERON:0004458,7.91e-07,49 | |||
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| ||
|short_description=p@chr17:65240926..65240938,+ | |short_description=p@chr17:65240926..65240938,+ | ||
}} | }} |
Latest revision as of 20:04, 25 July 2015
Short description: | p@chr17:65240926..65240938, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:65240926..65240938, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.05e-34 | 1 |
seminiferous tubule epithelial cell | 5.05e-34 | 1 |
Sertoli cell | 5.05e-34 | 1 |
perirenal preadipocyte | 7.06e-34 | 1 |
mast cell | 7.49e-08 | 5 |
basophil mast progenitor cell | 7.49e-08 | 5 |
protein secreting cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 8.09e-38 | 8 |
mesothelium | 5.05e-34 | 1 |
seminiferous tubule of testis | 5.05e-34 | 1 |
epithelium of male gonad | 5.05e-34 | 1 |
epithelial cord | 5.05e-34 | 1 |
sex cord | 5.05e-34 | 1 |
seminiferous tubule epithelium | 5.05e-34 | 1 |
testis sex cord | 5.05e-34 | 1 |
genital ridge | 5.05e-34 | 1 |
primitive sex cord of indifferent gonad | 5.05e-34 | 1 |
coelomic epithelium | 5.05e-34 | 1 |
male reproductive organ | 8.90e-28 | 11 |
epithelium of gonad | 9.07e-18 | 2 |
perirenal fat | 1.07e-17 | 2 |
gonad | 5.66e-15 | 21 |
indifferent external genitalia | 5.66e-15 | 21 |
indifferent gonad | 5.66e-15 | 21 |
gonad primordium | 5.66e-15 | 21 |
external genitalia | 2.49e-14 | 22 |
male organism | 2.49e-14 | 22 |
male reproductive system | 2.49e-14 | 22 |
duct of male reproductive system | 1.44e-09 | 4 |
body cavity | 3.12e-07 | 46 |
reproductive organ | 5.88e-07 | 48 |
body cavity or lining | 7.91e-07 | 49 |