FFCP PHASE1:Hg19::chr17:61045902..61045916,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK309769_5end | |association_with_transcript=0bp_to_AK309769_5end | ||
|cluster_id=chr17:61045902..61045916,- | |||
|description=CAGE_peak_1_at_AK309769_5end | |description=CAGE_peak_1_at_AK309769_5end | ||
|id=chr17:61045902..61045916,- | |id=chr17:61045902..61045916,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000362;1.01e-16;9!CL:0002368;6.83e-16;13!CL:0000312;3.18e-14;5!CL:0000240;7.19e-12;6!CL:0000311;7.19e-12;6!CL:0000079;7.19e-12;6!CL:0000237;7.19e-12;6!CL:0002159;1.56e-10;14!CL:0000123;4.13e-10;2!CL:0000242;4.13e-10;2!CL:0002561;2.28e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000362,7.67e-17,9;CL:0002368,5.24e-16,13;CL:0000312,4.37e-14,5;CL:0000240,9.33e-12,6;CL:0000311,9.33e-12,6;CL:0000079,9.33e-12,6;CL:0000237,9.33e-12,6;CL:0000036,9.33e-12,6;CL:0000357,9.33e-12,6;CL:0000114,9.33e-12,6;CL:0002159,1.32e-10,14;CL:0000242,3.63e-10,2;CL:0002561,1.01e-09,2;CL:0002076,6.07e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;7.19e-12;6!CL:0000114;7.19e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.15e-12!20;UBERON:0001869!1.74e-12!32;UBERON:0001893!1.83e-12!34;UBERON:0002619!2.40e-12!22;UBERON:0002791!7.75e-12!33;UBERON:0000956!3.84e-11!25;UBERON:0000203!3.84e-11!25;UBERON:0001017!4.28e-11!82;UBERON:0002020!5.31e-11!34;UBERON:0003528!5.31e-11!34;UBERON:0000073!5.35e-11!94;UBERON:0001016!5.35e-11!94;UBERON:0002780!1.08e-10!41;UBERON:0001890!1.08e-10!41;UBERON:0006240!1.08e-10!41;UBERON:0003080!3.11e-10!42;UBERON:0004121!3.20e-10!169;UBERON:0005743!5.78e-10!86;UBERON:0001049!1.25e-09!57;UBERON:0005068!1.25e-09!57;UBERON:0006241!1.25e-09!57;UBERON:0007135!1.25e-09!57;UBERON:0000924!1.57e-09!173;UBERON:0006601!1.57e-09!173;UBERON:0002616!6.37e-09!59;UBERON:0000955!2.01e-08!69;UBERON:0006238!2.01e-08!69;UBERON:0000475!1.21e-07!365 | |ontology_enrichment_uberon=UBERON:0001950!1.15e-12!20;UBERON:0001869!1.74e-12!32;UBERON:0001893!1.83e-12!34;UBERON:0002619!2.40e-12!22;UBERON:0002791!7.75e-12!33;UBERON:0000956!3.84e-11!25;UBERON:0000203!3.84e-11!25;UBERON:0001017!4.28e-11!82;UBERON:0002020!5.31e-11!34;UBERON:0003528!5.31e-11!34;UBERON:0000073!5.35e-11!94;UBERON:0001016!5.35e-11!94;UBERON:0002780!1.08e-10!41;UBERON:0001890!1.08e-10!41;UBERON:0006240!1.08e-10!41;UBERON:0003080!3.11e-10!42;UBERON:0004121!3.20e-10!169;UBERON:0005743!5.78e-10!86;UBERON:0001049!1.25e-09!57;UBERON:0005068!1.25e-09!57;UBERON:0006241!1.25e-09!57;UBERON:0007135!1.25e-09!57;UBERON:0000924!1.57e-09!173;UBERON:0006601!1.57e-09!173;UBERON:0002616!6.37e-09!59;UBERON:0000955!2.01e-08!69;UBERON:0006238!2.01e-08!69;UBERON:0000475!1.21e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;8.66e-10;15!UBERON:0007376;8.66e-10;15!UBERON:0005933;2.28e-09;2!UBERON:0005942;2.28e-09;2!UBERON:0005932;2.28e-09;2!UBERON:0001950;4.76e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,7.40e-10,15;UBERON:0007376,7.40e-10,15;UBERON:0007383,7.40e-10,15;UBERON:0005933,1.01e-09,2;UBERON:0005942,1.01e-09,2;UBERON:0005932,1.01e-09,2;UBERON:0001950,5.03e-07,20 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.739508020333575,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0,0,0,0,1.09162460023138,0.449446968890169,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,1.20848795132744,1.52054421143703,0.976248230192678,0,0.81014194788176,0,0,0,0,0,0,0,0,1.74437620857014,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0.816616685019573,0,0.413303124703062,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.794025282120147,0,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0,1.77504796258307,0.302256294682921,0.169560592310488,0,0.545492241181669,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,1.1240175325762,0.100528972411631,0.648119116109707,0,0,0,0,0,0.288732895522148,0,0,2.37061319387782,0,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,2.60279707715243,0,1.84267891867784,1.27587750330633,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,1.20303882181971,0.552485933615378,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.660075999364704,0.574265537996172,0,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.644521469209642,0.290033387828457,0,0.178064071293475,2.80984356113663,3.84380134730212,6.50824833722379,1.6185244936888,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0,1.73199802905922,0,1.08890984861323,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,2.32727527078292,0,0,0,0,0,0.649376687132959,0,0.7812832832557,0,0,0,3.55955110409873,0.945550727071745,1.03423011972439,0,0,0,0.482385754501632,0,0.221158519862449,0,0.438770794307945,0.10893846351899,0.278847488557207,0,0.341826167541004,1.1528195219403,2.2439411102443,0,0,0,1.06606955203727,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0.865554558968364,0,0,0,3.85477467284809,1.48276726735803,0.835375596043643,0.404406797884062,0,0.234264445725339,0,0.19566461893209,0.971121518136371,0,1.20990716048664,4.59109142445735,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0.365446585430928,0,0,0,0.225980740780532,0.137041924646751,0,0.569797163602908,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,1.799791132412,0.77380195455795,1.45798935979259,0,0.0788057072991982,0.367182116944987,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.500763722825999,0,0.110929051536852,0.18628920882415,0,0.249960815924213,0.151649117541648,0,0,2.34167452903441,2.8984205722165,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0.245772908753719,0.211312123358627,0,0.213383459388282,0,0.567515953566836,0,0,2.48830904013189,0.639471856518258,0,0,2.07498312564826,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0.578063025868136,0,0.159633859057151,0.205116364240755,7.81422258287326,0.691572524642179,0,1.42769420259154,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0.397832444232549,0,0.60511520611056,0,0.261906694481422,0.163771917510097,0.443568258651136,0.472763092328763,0.781078098613847,0.620060389503552,0.887821342714695,4.37579847214576,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0.171488009437418,0.271878931907327,0.72350050919134,0,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.08786384305464,6.10890966476528,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,1.05824249194267,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.739508020333575,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0,0,0,0,1.09162460023138,0.449446968890169,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,1.20848795132744,1.52054421143703,0.976248230192678,0,0.81014194788176,0,0,0,0,0,0,0,0,1.74437620857014,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0.816616685019573,0,0.413303124703062,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.794025282120147,0,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0,1.77504796258307,0.302256294682921,0.169560592310488,0,0.545492241181669,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,1.1240175325762,0.100528972411631,0.648119116109707,0,0,0,0,0,0.288732895522148,0,0,2.37061319387782,0,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,2.60279707715243,0,1.84267891867784,1.27587750330633,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,1.20303882181971,0.552485933615378,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.660075999364704,0.574265537996172,0,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.644521469209642,0.290033387828457,0,0.178064071293475,2.80984356113663,3.84380134730212,6.50824833722379,1.6185244936888,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0,1.73199802905922,0,1.08890984861323,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,2.32727527078292,0,0,0,0,0,0.649376687132959,0,0.7812832832557,0,0,0,3.55955110409873,0.945550727071745,1.03423011972439,0,0,0,0.482385754501632,0,0.221158519862449,0,0.438770794307945,0.10893846351899,0.278847488557207,0,0.341826167541004,1.1528195219403,2.2439411102443,0,0,0,1.06606955203727,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0.865554558968364,0,0,0,3.85477467284809,1.48276726735803,0.835375596043643,0.404406797884062,0,0.234264445725339,0,0.19566461893209,0.971121518136371,0,1.20990716048664,4.59109142445735,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0.365446585430928,0,0,0,0.225980740780532,0.137041924646751,0,0.569797163602908,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,1.799791132412,0.77380195455795,1.45798935979259,0,0.0788057072991982,0.367182116944987,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.500763722825999,0,0.110929051536852,0.18628920882415,0,0.249960815924213,0.151649117541648,0,0,2.34167452903441,2.8984205722165,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0.245772908753719,0.211312123358627,0,0.213383459388282,0,0.567515953566836,0,0,2.48830904013189,0.639471856518258,0,0,2.07498312564826,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0.578063025868136,0,0.159633859057151,0.205116364240755,7.81422258287326,0.691572524642179,0,1.42769420259154,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0.397832444232549,0,0.60511520611056,0,0.261906694481422,0.163771917510097,0.443568258651136,0.472763092328763,0.781078098613847,0.620060389503552,0.887821342714695,4.37579847214576,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0.171488009437418,0.271878931907327,0.72350050919134,0,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.08786384305464,6.10890966476528,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,1.05824249194267,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@AK309769 | |short_description=p1@AK309769 | ||
}} | }} |
Latest revision as of 19:40, 25 July 2015
Short description: | p1@AK309769 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK309769_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK309769_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epidermal cell | 7.67e-17 | 9 |
respiratory epithelial cell | 5.24e-16 | 13 |
keratinocyte | 4.37e-14 | 5 |
stratified squamous epithelial cell | 9.33e-12 | 6 |
keratin accumulating cell | 9.33e-12 | 6 |
stratified epithelial cell | 9.33e-12 | 6 |
keratinizing barrier epithelial cell | 9.33e-12 | 6 |
epithelial fate stem cell | 9.33e-12 | 6 |
stratified epithelial stem cell | 9.33e-12 | 6 |
surface ectodermal cell | 9.33e-12 | 6 |
general ecto-epithelial cell | 1.32e-10 | 14 |
Merkel cell | 3.63e-10 | 2 |
outer root sheath cell | 1.01e-09 | 2 |
endo-epithelial cell | 6.07e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 7.40e-10 | 15 |
outer epithelium | 7.40e-10 | 15 |
enveloping layer of ectoderm | 7.40e-10 | 15 |
hair root sheath | 1.01e-09 | 2 |
hair outer root sheath | 1.01e-09 | 2 |
bulb of hair follicle | 1.01e-09 | 2 |
neocortex | 5.03e-07 | 20 |