FFCP PHASE1:Hg19::chr17:60837528..60837555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:60837528..60837555,- | |||
|description=CAGE_peak_at_chr17:60837528..60837555,- | |description=CAGE_peak_at_chr17:60837528..60837555,- | ||
|id=chr17:60837528..60837555,- | |id=chr17:60837528..60837555,- | ||
|ontology_enrichment_celltype=CL:0000192!3.24e-30!42;CL:0000514!3.24e-30!42;CL:0000359!9.80e-25!32;CL:0000680!1.32e-23!57;CL:0000056!1.32e-23!57;CL:0000355!1.32e-23!57;CL:0000055!1.87e-22!180;CL:0000187!7.88e-21!54;CL:0000183!4.32e-18!59;CL:0000393!1.33e-17!60;CL:0000211!1.33e-17!60;CL:0000057!1.59e-12!75;CL:0002620!2.33e-11!23;CL:0002539!4.65e-11!10;CL:0000222!1.79e-08!119;CL:0002595!2.74e-08!5 | |ontology_enrichment_celltype=CL:0000192!3.24e-30!42;CL:0000514!3.24e-30!42;CL:0000359!9.80e-25!32;CL:0000680!1.32e-23!57;CL:0000056!1.32e-23!57;CL:0000355!1.32e-23!57;CL:0000055!1.87e-22!180;CL:0000187!7.88e-21!54;CL:0000183!4.32e-18!59;CL:0000393!1.33e-17!60;CL:0000211!1.33e-17!60;CL:0000057!1.59e-12!75;CL:0002620!2.33e-11!23;CL:0002539!4.65e-11!10;CL:0000222!1.79e-08!119;CL:0002595!2.74e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.69e-29;32!CL:0002595;3.19e-21;5!CL:0000192;2.23e-18;43!CL:0002592;4.35e-14;3!CL:0002615;8.71e-13;3!CL:0002539;1.23e-10;10!CL:0002561;2.18e-10;2!CL:0002593;1.71e-09;2!CL:0002195;2.26e-09;2!CL:0002571;2.26e-09;2!CL:0000187;3.54e-09;55!CL:0000136;6.30e-08;13!CL:0000393;3.59e-07;61!CL:0000211;3.59e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.32e-30,32;CL:0000192,1.92e-24,43;CL:0000514,1.92e-24,43;CL:0000680,1.17e-21,58;CL:0000056,1.17e-21,58;CL:0000355,1.17e-21,58;CL:0002595,1.59e-21,5;CL:0000187,3.13e-18,55;CL:0000393,4.79e-16,61;CL:0000211,4.79e-16,61;CL:0002592,3.44e-14,3;CL:0002615,1.17e-12,3;CL:0002539,1.57e-10,10;CL:0002561,2.19e-10,2;CL:0002593,1.22e-09,2;CL:0002195,2.13e-09,2;CL:0002571,2.13e-09,2;CL:0000222,3.04e-09,121;CL:0000136,8.71e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.23e-18;43!CL:0000355;3.82e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr17:60837528..60837555,- | |short_description=p@chr17:60837528..60837555,- | ||
}} | }} |
Latest revision as of 19:40, 25 July 2015
Short description: | p@chr17:60837528..60837555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:60837528..60837555, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.32e-30 | 32 |
smooth muscle cell | 1.92e-24 | 43 |
smooth muscle myoblast | 1.92e-24 | 43 |
muscle precursor cell | 1.17e-21 | 58 |
myoblast | 1.17e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-21 | 58 |
smooth muscle cell of the subclavian artery | 1.59e-21 | 5 |
muscle cell | 3.13e-18 | 55 |
electrically responsive cell | 4.79e-16 | 61 |
electrically active cell | 4.79e-16 | 61 |
smooth muscle cell of the coronary artery | 3.44e-14 | 3 |
adipocyte of omentum tissue | 1.17e-12 | 3 |
aortic smooth muscle cell | 1.57e-10 | 10 |
outer root sheath cell | 2.19e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.22e-09 | 2 |
hepatic stem cell | 2.13e-09 | 2 |
hepatic mesenchymal stem cell | 2.13e-09 | 2 |
mesodermal cell | 3.04e-09 | 121 |
fat cell | 8.71e-07 | 15 |