FFCP PHASE1:Hg19::chr17:57870810..57870824,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:57870810..57870824,+
|short_description=p@chr17:57870810..57870824,+
|description=CAGE_peak_at_chr17:57870810..57870824,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:57870810..57870824,+ | |||
|coexpression_cluster_id=C641 | |||
|description=CAGE_peak_at_chr17:57870810..57870824,+ | |||
|id=chr17:57870810..57870824,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.26e-56!63;CL:0000576!2.26e-56!63;CL:0000040!2.26e-56!63;CL:0000559!2.26e-56!63;CL:0002057!1.65e-54!42;CL:0002009!2.03e-54!65;CL:0000766!8.79e-52!76;CL:0000860!1.95e-50!45;CL:0000839!5.08e-50!70;CL:0000557!3.25e-49!71;CL:0000763!5.30e-37!112;CL:0000049!5.30e-37!112;CL:0002087!3.18e-30!119;CL:0000738!5.50e-28!140;CL:0002031!8.88e-27!124;CL:0000037!3.76e-24!172;CL:0000566!3.76e-24!172;CL:0002032!5.97e-24!165;CL:0000837!5.97e-24!165;CL:0000988!2.43e-22!182;CL:0000134!4.17e-07!358;CL:0002320!8.23e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-85;33!CL:0002057;2.21e-85;33!CL:0000473;1.91e-65;39!CL:0000234;1.91e-65;39!CL:0000576;5.29e-57;48!CL:0000766;1.55e-32;69!CL:0000763;5.49e-19;100!CL:0002087;2.10e-15;104!CL:0002393;1.33e-12;6!CL:0002397;1.33e-12;6!CL:0000738;1.50e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.56e-101,42;CL:0002057,3.56e-101,42;CL:0000473,3.77e-96,48;CL:0000234,3.77e-96,48;CL:0002194,2.75e-76,59;CL:0000576,2.75e-76,59;CL:0000040,2.75e-76,59;CL:0000559,2.75e-76,59;CL:0002009,1.01e-73,61;CL:0000839,5.54e-68,66;CL:0000557,6.18e-67,67;CL:0000766,3.95e-62,72;CL:0000763,1.60e-40,108;CL:0000049,1.60e-40,108;CL:0002087,7.10e-38,115;CL:0002031,3.59e-36,120;CL:0000738,1.50e-31,136;CL:0002032,3.76e-26,161;CL:0000837,3.76e-26,161;CL:0000037,6.33e-25,168;CL:0000988,1.73e-23,177;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0000219,9.21e-09,386;CL:0002393,1.42e-08,9;CL:0002397,1.42e-08,9;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.69e-78;42!CL:0000049;3.17e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.53e-44!102;UBERON:0003061!4.53e-44!102;UBERON:0002371!7.48e-43!80;UBERON:0002193!9.50e-42!112;UBERON:0001474!2.41e-39!86;UBERON:0004765!2.22e-32!101;UBERON:0001434!2.22e-32!101;UBERON:0002405!2.00e-31!115;UBERON:0003081!1.16e-18!216;UBERON:0002204!1.48e-16!167;UBERON:0000926!3.89e-07!448;UBERON:0004120!3.89e-07!448;UBERON:0006603!3.89e-07!448;UBERON:0002384!5.14e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.83e-59,76;UBERON:0001474,2.98e-54,82;UBERON:0004765,3.40e-49,90;UBERON:0002405,1.61e-47,93;UBERON:0002390,5.95e-45,98;UBERON:0003061,5.95e-45,98;UBERON:0001434,5.37e-44,100;UBERON:0002193,1.60e-40,108;UBERON:0002204,4.29e-25,167;UBERON:0003081,4.77e-20,203;UBERON:0000926,1.17e-11,315;UBERON:0004120,1.17e-11,315;UBERON:0006603,1.17e-11,315;UBERON:0002384,2.45e-09,371 | |||
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| ||
|short_description=p@chr17:57870810..57870824,+ | |||
}} | }} |
Latest revision as of 19:27, 25 July 2015
Short description: | p@chr17:57870810..57870824, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:57870810..57870824, + |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.56e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.56e-101 | 42 |
defensive cell | 3.77e-96 | 48 |
phagocyte | 3.77e-96 | 48 |
monopoietic cell | 2.75e-76 | 59 |
monocyte | 2.75e-76 | 59 |
monoblast | 2.75e-76 | 59 |
promonocyte | 2.75e-76 | 59 |
macrophage dendritic cell progenitor | 1.01e-73 | 61 |
myeloid lineage restricted progenitor cell | 5.54e-68 | 66 |
granulocyte monocyte progenitor cell | 6.18e-67 | 67 |
myeloid leukocyte | 3.95e-62 | 72 |
myeloid cell | 1.60e-40 | 108 |
common myeloid progenitor | 1.60e-40 | 108 |
nongranular leukocyte | 7.10e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 3.59e-36 | 120 |
leukocyte | 1.50e-31 | 136 |
hematopoietic oligopotent progenitor cell | 3.76e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.76e-26 | 161 |
hematopoietic stem cell | 6.33e-25 | 168 |
hematopoietic cell | 1.73e-23 | 177 |
mesenchymal cell | 5.77e-10 | 354 |
connective tissue cell | 1.06e-09 | 361 |
motile cell | 9.21e-09 | 386 |
intermediate monocyte | 1.42e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.42e-08 | 9 |
multi fate stem cell | 1.30e-07 | 427 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.83e-59 | 76 |
bone element | 2.98e-54 | 82 |
skeletal element | 3.40e-49 | 90 |
immune system | 1.61e-47 | 93 |
hematopoietic system | 5.95e-45 | 98 |
blood island | 5.95e-45 | 98 |
skeletal system | 5.37e-44 | 100 |
hemolymphoid system | 1.60e-40 | 108 |
musculoskeletal system | 4.29e-25 | 167 |
lateral plate mesoderm | 4.77e-20 | 203 |
mesoderm | 1.17e-11 | 315 |
mesoderm-derived structure | 1.17e-11 | 315 |
presumptive mesoderm | 1.17e-11 | 315 |
connective tissue | 2.45e-09 | 371 |