FFCP PHASE1:Hg19::chr17:55185128..55185169,+: Difference between revisions
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|id=chr17:55185128..55185169,+
|short_description=p@chr17:55185128..55185169,+
|description=CAGE_peak_at_chr17:55185128..55185169,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:55185128..55185169,+ | |||
|coexpression_cluster_id=C1052 | |||
|description=CAGE_peak_at_chr17:55185128..55185169,+ | |||
|id=chr17:55185128..55185169,+ | |||
|ontology_enrichment_celltype=CL:1000415!4.37e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.87e-53;3!CL:0002251;5.93e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.87e-53,3;CL:0002251,5.93e-09,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.53e-10!106;DOID:3493!2.41e-09!2;DOID:4929!6.18e-09!2;DOID:0050687!1.87e-07!143;DOID:299!6.10e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.05e-79;2!DOID:299;6.34e-26;25!DOID:3119;2.37e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.05e-79,2;DOID:299,6.54e-26,25;DOID:3119,2.37e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0002294!6.03e-13!7;UBERON:0001173!6.03e-13!7;UBERON:0004912!6.03e-13!7;UBERON:0002110!1.11e-11!3;UBERON:0006242!1.11e-11!3;UBERON:0001007!1.13e-08!155;UBERON:0001555!1.13e-08!155;UBERON:0007026!1.13e-08!155;UBERON:0004119!1.69e-07!169;UBERON:0000925!1.69e-07!169;UBERON:0006595!1.69e-07!169;UBERON:0000344!2.97e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.62e-71;5!UBERON:0010039;3.62e-71;5!UBERON:0001041;3.92e-26;14!UBERON:0005409;2.78e-16;22!UBERON:0004921;9.63e-10;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.86e-45,8;UBERON:0010039,5.86e-45,8;UBERON:0005409,1.62e-14,25 | |||
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| ||
|short_description=p@chr17:55185128..55185169,+ | |||
}} | }} |
Latest revision as of 19:09, 25 July 2015
Short description: | p@chr17:55185128..55185169, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:55185128..55185169, + |
Coexpression cluster: | C1052_signet_colon_mucinous_papillotubular_adenocarcinoma_gall_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.87e-53 | 3 |
epithelial cell of alimentary canal | 5.93e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.86e-45 | 8 |
food storage organ | 5.86e-45 | 8 |
gastrointestinal system | 1.62e-14 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.05e-79 | 2 |
adenocarcinoma | 6.54e-26 | 25 |
gastrointestinal system cancer | 2.37e-12 | 14 |