FFCP PHASE1:Hg19::chr17:5138215..5138285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:5138215..5138285,+ | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr17:5138215..5138285,+ | |description=CAGE_peak_at_chr17:5138215..5138285,+ | ||
|id=chr17:5138215..5138285,+ | |id=chr17:5138215..5138285,+ | ||
|ontology_enrichment_celltype=CL:0002087!1.03e-50!119;CL:0002194!3.85e-46!63;CL:0000576!3.85e-46!63;CL:0000040!3.85e-46!63;CL:0000559!3.85e-46!63;CL:0002009!4.36e-44!65;CL:0002057!5.27e-44!42;CL:0000738!6.76e-44!140;CL:0002031!9.27e-43!124;CL:0000860!6.11e-40!45;CL:0000766!1.04e-39!76;CL:0000839!1.78e-39!70;CL:0000557!1.24e-38!71;CL:0000037!4.99e-33!172;CL:0000566!4.99e-33!172;CL:0002032!4.05e-31!165;CL:0000837!4.05e-31!165;CL:0000988!1.48e-29!182;CL:0000763!3.27e-23!112;CL:0000049!3.27e-23!112;CL:0000945!1.18e-17!24;CL:0000826!1.18e-17!24;CL:0000236!5.54e-13!14;CL:0002393!6.13e-12!9;CL:0002397!6.13e-12!9;CL:0000838!7.46e-08!52;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53 | |ontology_enrichment_celltype=CL:0002087!1.03e-50!119;CL:0002194!3.85e-46!63;CL:0000576!3.85e-46!63;CL:0000040!3.85e-46!63;CL:0000559!3.85e-46!63;CL:0002009!4.36e-44!65;CL:0002057!5.27e-44!42;CL:0000738!6.76e-44!140;CL:0002031!9.27e-43!124;CL:0000860!6.11e-40!45;CL:0000766!1.04e-39!76;CL:0000839!1.78e-39!70;CL:0000557!1.24e-38!71;CL:0000037!4.99e-33!172;CL:0000566!4.99e-33!172;CL:0002032!4.05e-31!165;CL:0000837!4.05e-31!165;CL:0000988!1.48e-29!182;CL:0000763!3.27e-23!112;CL:0000049!3.27e-23!112;CL:0000945!1.18e-17!24;CL:0000826!1.18e-17!24;CL:0000236!5.54e-13!14;CL:0002393!6.13e-12!9;CL:0002397!6.13e-12!9;CL:0000838!7.46e-08!52;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.18e-45;33!CL:0002057;3.18e-45;33!CL:0000576;1.70e-44;48!CL:0000473;7.88e-37;39!CL:0000234;7.88e-37;39!CL:0000766;9.11e-29;69!CL:0000945;1.07e-24;24!CL:0002087;1.03e-21;104!CL:0000236;3.87e-21;13!CL:0000738;1.25e-16;136!CL:0002393;8.76e-14;6!CL:0002397;8.76e-14;6!CL:0000763;7.03e-12;100!CL:0000988;1.65e-08;177!CL:0000875;2.46e-08;3!CL:0002396;2.46e-08;3!CL:0002619;3.75e-08;3!CL:0000226;4.22e-07;3!CL:0000842;4.22e-07;3!CL:0000219;5.19e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.33e-73,115;CL:0002194,3.78e-72,59;CL:0000576,3.78e-72,59;CL:0000040,3.78e-72,59;CL:0000559,3.78e-72,59;CL:0002009,2.36e-69,61;CL:0000473,4.23e-68,48;CL:0000234,4.23e-68,48;CL:0000860,4.37e-68,42;CL:0002057,4.37e-68,42;CL:0000738,1.16e-63,136;CL:0000839,4.24e-63,66;CL:0002031,9.45e-63,120;CL:0000766,3.68e-62,72;CL:0000557,5.85e-62,67;CL:0000037,9.83e-50,168;CL:0002032,2.67e-47,161;CL:0000837,2.67e-47,161;CL:0000988,2.95e-46,177;CL:0000763,1.42e-38,108;CL:0000049,1.42e-38,108;CL:0000945,1.02e-24,24;CL:0000826,1.02e-24,24;CL:0000236,5.73e-23,14;CL:0002393,3.01e-20,9;CL:0002397,3.01e-20,9;CL:0000134,1.24e-14,354;CL:0002320,5.31e-14,361;CL:0000219,8.60e-12,386;CL:0000048,3.93e-09,427;CL:0000838,7.85e-09,52;CL:0000723,9.04e-09,433;CL:0000542,1.39e-08,53;CL:0000051,1.39e-08,53;CL:0000875,2.47e-08,3;CL:0002396,2.47e-08,3;CL:0000034,2.64e-08,441;CL:0002619,3.67e-08,3;CL:0000226,3.44e-07,3;CL:0000842,3.44e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.34e-48;42!CL:0000049;1.26e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.26e-40!102;UBERON:0003061!4.26e-40!102;UBERON:0002193!3.04e-37!112;UBERON:0007023!1.19e-32!115;UBERON:0002371!5.06e-32!80;UBERON:0001474!2.06e-28!86;UBERON:0002405!2.02e-26!115;UBERON:0004765!3.28e-22!101;UBERON:0001434!3.28e-22!101;UBERON:0003081!9.24e-11!216;UBERON:0001049!4.09e-09!57;UBERON:0005068!4.09e-09!57;UBERON:0006241!4.09e-09!57;UBERON:0007135!4.09e-09!57;UBERON:0002204!1.37e-08!167;UBERON:0003080!1.68e-07!42;UBERON:0002308!2.08e-07!9;UBERON:0000125!2.08e-07!9;UBERON:0000479!2.16e-07!787;UBERON:0002616!4.49e-07!59;UBERON:0002780!6.18e-07!41;UBERON:0001890!6.18e-07!41;UBERON:0006240!6.18e-07!41 | |ontology_enrichment_uberon=UBERON:0002390!4.26e-40!102;UBERON:0003061!4.26e-40!102;UBERON:0002193!3.04e-37!112;UBERON:0007023!1.19e-32!115;UBERON:0002371!5.06e-32!80;UBERON:0001474!2.06e-28!86;UBERON:0002405!2.02e-26!115;UBERON:0004765!3.28e-22!101;UBERON:0001434!3.28e-22!101;UBERON:0003081!9.24e-11!216;UBERON:0001049!4.09e-09!57;UBERON:0005068!4.09e-09!57;UBERON:0006241!4.09e-09!57;UBERON:0007135!4.09e-09!57;UBERON:0002204!1.37e-08!167;UBERON:0003080!1.68e-07!42;UBERON:0002308!2.08e-07!9;UBERON:0000125!2.08e-07!9;UBERON:0000479!2.16e-07!787;UBERON:0002616!4.49e-07!59;UBERON:0002780!6.18e-07!41;UBERON:0001890!6.18e-07!41;UBERON:0006240!6.18e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.29e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-59,98;UBERON:0003061,1.02e-59,98;UBERON:0002193,2.86e-57,108;UBERON:0002371,4.87e-53,76;UBERON:0002405,7.28e-52,93;UBERON:0001474,3.58e-48,82;UBERON:0004765,1.09e-42,90;UBERON:0001434,4.51e-37,100;UBERON:0003081,9.13e-22,203;UBERON:0002204,6.37e-17,167;UBERON:0002384,8.32e-14,371;UBERON:0000926,8.74e-09,315;UBERON:0004120,8.74e-09,315;UBERON:0006603,8.74e-09,315;UBERON:0002106,3.03e-07,3;UBERON:0004854,3.03e-07,3;UBERON:0009034,3.03e-07,3;UBERON:0002095,3.03e-07,3;UBERON:0004782,3.03e-07,3;UBERON:0003281,3.03e-07,3;UBERON:0009664,3.03e-07,3;UBERON:0002296,3.03e-07,3;UBERON:0005602,3.03e-07,3;UBERON:0001179,3.03e-07,3;UBERON:0006293,3.03e-07,3 | |||
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|short_description=p@chr17:5138215..5138285,+ | |short_description=p@chr17:5138215..5138285,+ | ||
}} | }} |
Latest revision as of 18:58, 25 July 2015
Short description: | p@chr17:5138215..5138285, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:5138215..5138285, + |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-59 | 98 |
blood island | 1.02e-59 | 98 |
hemolymphoid system | 2.86e-57 | 108 |
bone marrow | 4.87e-53 | 76 |
immune system | 7.28e-52 | 93 |
bone element | 3.58e-48 | 82 |
skeletal element | 1.09e-42 | 90 |
skeletal system | 4.51e-37 | 100 |
lateral plate mesoderm | 9.13e-22 | 203 |
musculoskeletal system | 6.37e-17 | 167 |
connective tissue | 8.32e-14 | 371 |
mesoderm | 8.74e-09 | 315 |
mesoderm-derived structure | 8.74e-09 | 315 |
presumptive mesoderm | 8.74e-09 | 315 |
spleen | 3.03e-07 | 3 |
gastrointestinal system mesentery | 3.03e-07 | 3 |
stomach region | 3.03e-07 | 3 |
mesentery | 3.03e-07 | 3 |
gastrointestinal system serosa | 3.03e-07 | 3 |
mesentery of stomach | 3.03e-07 | 3 |
gut mesentery | 3.03e-07 | 3 |
dorsal mesentery | 3.03e-07 | 3 |
dorsal mesogastrium | 3.03e-07 | 3 |
peritoneal cavity | 3.03e-07 | 3 |
spleen primordium | 3.03e-07 | 3 |