FFCP PHASE1:Hg19::chr17:48822115..48822146,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48822115..48822146,+ | |||
|coexpression_cluster_id=C1228 | |||
|description=CAGE_peak_at_chr17:48822115..48822146,+ | |||
|id=chr17:48822115..48822146,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.36e-30!235;DOID:14566!4.89e-30!239;DOID:0050687!6.92e-16!143;DOID:0050686!2.65e-14!137;DOID:2531!5.72e-12!51;DOID:0060083!5.72e-12!51;DOID:305!2.38e-10!106;DOID:1240!1.35e-09!39;DOID:8692!3.04e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.33e-08;39!DOID:2531;9.18e-08;51!DOID:0060083;9.18e-08;51!DOID:8692;4.05e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.50e-30,235;DOID:14566,5.08e-30,239;DOID:0050687,7.59e-16,143;DOID:0050686,3.46e-14,137;DOID:2531,4.56e-12,51;DOID:0060083,4.56e-12,51;DOID:305,2.82e-10,106;DOID:1240,1.13e-09,39;DOID:8692,2.69e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.47e-13!94;UBERON:0001016!2.47e-13!94;UBERON:0001049!3.79e-13!57;UBERON:0005068!3.79e-13!57;UBERON:0006241!3.79e-13!57;UBERON:0007135!3.79e-13!57;UBERON:0001017!1.55e-12!82;UBERON:0002780!2.93e-12!41;UBERON:0001890!2.93e-12!41;UBERON:0006240!2.93e-12!41;UBERON:0003080!2.67e-11!42;UBERON:0005743!4.23e-11!86;UBERON:0002020!5.84e-11!34;UBERON:0003528!5.84e-11!34;UBERON:0000955!1.88e-10!69;UBERON:0006238!1.88e-10!69;UBERON:0002791!1.77e-09!33;UBERON:0002616!2.46e-09!59;UBERON:0001893!3.35e-09!34;UBERON:0001869!5.00e-09!32;UBERON:0002346!5.60e-08!90;UBERON:0003075!3.49e-07!86;UBERON:0007284!3.49e-07!86;UBERON:0000956!3.56e-07!25;UBERON:0000203!3.56e-07!25;UBERON:0002619!7.25e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.46e-09;41!UBERON:0001890;2.46e-09;41!UBERON:0002791;2.79e-09;32!UBERON:0003528;2.85e-09;34!UBERON:0002020;2.85e-09;34!UBERON:0001869;1.65e-08;32!UBERON:0000073;8.44e-08;53!UBERON:0002616;8.44e-08;53!UBERON:0001893;9.96e-08;34!UBERON:0000956;3.65e-07;25!UBERON:0000203;3.65e-07;25!UBERON:0001016;4.49e-07;83!UBERON:0002619;8.75e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.89e-16,89;UBERON:0001049,4.59e-14,56;UBERON:0005068,4.59e-14,56;UBERON:0006241,4.59e-14,56;UBERON:0007135,4.59e-14,56;UBERON:0001017,2.41e-13,81;UBERON:0000073,1.41e-12,53;UBERON:0002616,1.41e-12,53;UBERON:0002780,3.61e-12,41;UBERON:0001890,3.61e-12,41;UBERON:0003080,3.61e-12,41;UBERON:0006240,3.61e-12,41;UBERON:0000955,3.17e-11,68;UBERON:0006238,3.17e-11,68;UBERON:0003528,7.48e-11,34;UBERON:0002020,7.48e-11,34;UBERON:0002791,9.03e-10,32;UBERON:0002346,1.73e-09,86;UBERON:0001893,4.26e-09,34;UBERON:0011216,5.48e-09,223;UBERON:0001869,6.43e-09,32;UBERON:0003075,1.27e-08,82;UBERON:0007284,1.27e-08,82;UBERON:0000956,4.72e-07,25;UBERON:0000203,4.72e-07,25;UBERON:0010371,6.48e-07,104;UBERON:0003056,8.05e-07,61;UBERON:0002619,9.81e-07,22 | |||
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| |||
|short_description=p@chr17:48822115..48822146,+ | |||
}} |
Latest revision as of 18:49, 25 July 2015
Short description: | p@chr17:48822115..48822146, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48822115..48822146, + |
Coexpression cluster: | C1228_medulloblastoma_neuroectodermal_small_cerebellum_medial_retinoblastoma_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 9.89e-16 | 89 |
neural tube | 4.59e-14 | 56 |
neural rod | 4.59e-14 | 56 |
future spinal cord | 4.59e-14 | 56 |
neural keel | 4.59e-14 | 56 |
central nervous system | 2.41e-13 | 81 |
regional part of nervous system | 1.41e-12 | 53 |
regional part of brain | 1.41e-12 | 53 |
regional part of forebrain | 3.61e-12 | 41 |
forebrain | 3.61e-12 | 41 |
anterior neural tube | 3.61e-12 | 41 |
future forebrain | 3.61e-12 | 41 |
brain | 3.17e-11 | 68 |
future brain | 3.17e-11 | 68 |
brain grey matter | 7.48e-11 | 34 |
gray matter | 7.48e-11 | 34 |
regional part of telencephalon | 9.03e-10 | 32 |
neurectoderm | 1.73e-09 | 86 |
telencephalon | 4.26e-09 | 34 |
organ system subdivision | 5.48e-09 | 223 |
cerebral hemisphere | 6.43e-09 | 32 |
neural plate | 1.27e-08 | 82 |
presumptive neural plate | 1.27e-08 | 82 |
cerebral cortex | 4.72e-07 | 25 |
pallium | 4.72e-07 | 25 |
ecto-epithelium | 6.48e-07 | 104 |
pre-chordal neural plate | 8.05e-07 | 61 |
regional part of cerebral cortex | 9.81e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.50e-30 | 235 |
disease of cellular proliferation | 5.08e-30 | 239 |
cell type cancer | 7.59e-16 | 143 |
organ system cancer | 3.46e-14 | 137 |
hematologic cancer | 4.56e-12 | 51 |
immune system cancer | 4.56e-12 | 51 |
carcinoma | 2.82e-10 | 106 |
leukemia | 1.13e-09 | 39 |
myeloid leukemia | 2.69e-07 | 31 |