FFCP PHASE1:Hg19::chr17:4872662..4872671,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:4872662..4872671,-
|short_description=p@chr17:4872662..4872671,-
|description=CAGE_peak_at_chr17:4872662..4872671,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:4872662..4872671,- | |||
|coexpression_cluster_id=C2421 | |||
|description=CAGE_peak_at_chr17:4872662..4872671,- | |||
|id=chr17:4872662..4872671,- | |||
|ontology_enrichment_celltype=CL:0000548!1.55e-16!679;CL:0000004!1.55e-16!679;CL:0000255!1.55e-16!679;CL:0000012!5.08e-16!682;CL:0000055!3.51e-15!180;CL:0002371!2.14e-12!591;CL:0000144!3.20e-12!625;CL:0000003!7.90e-11!722;CL:0000057!8.80e-10!75;CL:0000048!9.50e-08!430;CL:0000723!2.71e-07!436;CL:0000063!4.55e-07!578;CL:0000034!5.76e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.40e-07;12!CL:0002580;3.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.11e-07,12;CL:0002580,3.39e-07,3;CL:0000048,4.82e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.17e-11;6!UBERON:0002358;1.17e-11;6!UBERON:0003684;1.17e-11;6!UBERON:0001178;1.17e-11;6!UBERON:0004457;7.58e-10;9!UBERON:0000042;7.58e-10;9!UBERON:0002331;6.23e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.96e-11,6;UBERON:0002358,2.96e-11,6;UBERON:0003684,2.96e-11,6;UBERON:0001178,2.96e-11,6;UBERON:0002331,6.32e-08,10;UBERON:0000358,6.32e-08,10;UBERON:0000307,6.32e-08,10;UBERON:0000091,6.32e-08,10;UBERON:0000087,6.32e-08,10;UBERON:0007010,6.32e-08,10;UBERON:0007806,6.32e-08,10;UBERON:0008780,6.32e-08,10;UBERON:0005728,6.32e-08,10;UBERON:0004457,6.21e-07,12;UBERON:0000042,6.21e-07,12 | |||
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| ||
|short_description=p@chr17:4872662..4872671,- | |||
}} | }} |
Latest revision as of 18:47, 25 July 2015
Short description: | p@chr17:4872662..4872671, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4872662..4872671, - |
Coexpression cluster: | C2421_pineal_Fibroblast_cord_Keratocytes_mesenchymal_Smooth_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.11e-07 | 12 |
preadipocyte of the breast | 3.39e-07 | 3 |
multi fate stem cell | 4.82e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.96e-11 | 6 |
peritoneum | 2.96e-11 | 6 |
abdominal cavity | 2.96e-11 | 6 |
visceral peritoneum | 2.96e-11 | 6 |
umbilical cord | 6.32e-08 | 10 |
blastocyst | 6.32e-08 | 10 |
blastula | 6.32e-08 | 10 |
bilaminar disc | 6.32e-08 | 10 |
inner cell mass | 6.32e-08 | 10 |
cleaving embryo | 6.32e-08 | 10 |
connecting stalk | 6.32e-08 | 10 |
inner cell mass derived epiblast | 6.32e-08 | 10 |
extraembryonic mesoderm | 6.32e-08 | 10 |
cavity lining | 6.21e-07 | 12 |
serous membrane | 6.21e-07 | 12 |