FFCP PHASE1:Hg19::chr17:48269180..48269221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48269180..48269221,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_at_chr17:48269180..48269221,+ | |description=CAGE_peak_at_chr17:48269180..48269221,+ | ||
|id=chr17:48269180..48269221,+ | |id=chr17:48269180..48269221,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.82e-42!180;CL:0000057!1.77e-30!75;CL:0000048!1.46e-18!430;CL:0000183!2.92e-18!59;CL:0000680!8.69e-18!57;CL:0000056!8.69e-18!57;CL:0000355!8.69e-18!57;CL:0000723!1.49e-17!436;CL:0000187!6.38e-17!54;CL:0000034!2.91e-16!444;CL:0000192!7.57e-14!42;CL:0000514!7.57e-14!42;CL:0000393!9.73e-14!60;CL:0000211!9.73e-14!60;CL:0002371!1.45e-12!591;CL:0000144!2.56e-11!625;CL:0002620!2.42e-10!23;CL:0002320!1.93e-09!365;CL:0000359!7.54e-09!32;CL:0002334!2.62e-08!12;CL:0000134!5.76e-08!358;CL:0002570!2.53e-07!8;CL:0002494!4.51e-07!16;CL:0000222!9.88e-07!119 | |ontology_enrichment_celltype=CL:0000055!2.82e-42!180;CL:0000057!1.77e-30!75;CL:0000048!1.46e-18!430;CL:0000183!2.92e-18!59;CL:0000680!8.69e-18!57;CL:0000056!8.69e-18!57;CL:0000355!8.69e-18!57;CL:0000723!1.49e-17!436;CL:0000187!6.38e-17!54;CL:0000034!2.91e-16!444;CL:0000192!7.57e-14!42;CL:0000514!7.57e-14!42;CL:0000393!9.73e-14!60;CL:0000211!9.73e-14!60;CL:0002371!1.45e-12!591;CL:0000144!2.56e-11!625;CL:0002620!2.42e-10!23;CL:0002320!1.93e-09!365;CL:0000359!7.54e-09!32;CL:0002334!2.62e-08!12;CL:0000134!5.76e-08!358;CL:0002570!2.53e-07!8;CL:0002494!4.51e-07!16;CL:0000222!9.88e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000134;9.37e-10;55!CL:0002334;6.05e-09;12!CL:0000057;9.38e-09;73!CL:0002570;1.13e-08;8!CL:0000499;2.07e-08;28!CL:0000048;2.55e-08;58!CL:0000723;8.89e-08;61!CL:0002320;2.77e-07;188!CL:0002569;8.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.02e-22,76;CL:0000048,1.75e-14,427;CL:0000723,6.89e-14,433;CL:0000034,4.00e-13,441;CL:0002320,7.98e-11,361;CL:0000134,1.97e-10,354;CL:0002334,3.70e-09,12;CL:0000219,5.11e-09,386;CL:0002570,9.90e-09,8;CL:0000499,1.90e-08,28;CL:0000136,4.07e-07,15;CL:0002569,9.05e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.59e-07;5!DOID:450;1.59e-07;5!DOID:66;1.59e-07;5!DOID:423;1.59e-07;5!DOID:0080000;1.59e-07;5!DOID:11722;1.59e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.13e-07,5;DOID:450,2.13e-07,5;DOID:66,2.13e-07,5;DOID:423,2.13e-07,5;DOID:0080000,2.13e-07,5;DOID:11722,2.13e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.28e-20!83;UBERON:0002329!9.28e-20!83;UBERON:0003077!9.28e-20!83;UBERON:0003059!9.28e-20!83;UBERON:0007282!9.28e-20!83;UBERON:0009618!9.28e-20!83;UBERON:0007285!9.28e-20!83;UBERON:0004290!1.62e-18!70;UBERON:0001134!3.65e-18!61;UBERON:0002036!3.65e-18!61;UBERON:0003082!3.65e-18!61;UBERON:0002385!8.02e-18!63;UBERON:0001015!8.02e-18!63;UBERON:0000383!8.02e-18!63;UBERON:0000486!5.44e-15!82;UBERON:0005256!5.76e-11!143;UBERON:0002384!1.04e-09!375;UBERON:0001013!2.62e-08!14;UBERON:0004872!5.51e-08!84;UBERON:0002199!1.97e-07!45;UBERON:0002416!1.97e-07!45;UBERON:0003102!2.70e-07!95;UBERON:0000475!3.56e-07!365;UBERON:0002100!6.77e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!9.28e-20!83;UBERON:0002329!9.28e-20!83;UBERON:0003077!9.28e-20!83;UBERON:0003059!9.28e-20!83;UBERON:0007282!9.28e-20!83;UBERON:0009618!9.28e-20!83;UBERON:0007285!9.28e-20!83;UBERON:0004290!1.62e-18!70;UBERON:0001134!3.65e-18!61;UBERON:0002036!3.65e-18!61;UBERON:0003082!3.65e-18!61;UBERON:0002385!8.02e-18!63;UBERON:0001015!8.02e-18!63;UBERON:0000383!8.02e-18!63;UBERON:0000486!5.44e-15!82;UBERON:0005256!5.76e-11!143;UBERON:0002384!1.04e-09!375;UBERON:0001013!2.62e-08!14;UBERON:0004872!5.51e-08!84;UBERON:0002199!1.97e-07!45;UBERON:0002416!1.97e-07!45;UBERON:0003102!2.70e-07!95;UBERON:0000475!3.56e-07!365;UBERON:0002100!6.77e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.04e-09;14!UBERON:0002384;1.75e-08;198!UBERON:0003104;2.67e-08;7!UBERON:0009142;2.67e-08;7!UBERON:0004457;8.78e-08;9!UBERON:0000042;8.78e-08;9!UBERON:0003688;6.38e-07;6!UBERON:0002358;6.38e-07;6!UBERON:0003684;6.38e-07;6!UBERON:0001178;6.38e-07;6!UBERON:0003422;8.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.02e-11,371;UBERON:0001013,8.89e-10,14;UBERON:0003688,7.80e-07,6;UBERON:0002358,7.80e-07,6;UBERON:0003684,7.80e-07,6;UBERON:0001178,7.80e-07,6;UBERON:0003422,9.05e-07,6 | |||
|phase1_expression=1.81678379270557,4.92431204949261,3.38290569830331,2.00146596706261,4.02264984984559,6.10636966870258,7.59899634504932,0.631719873426831,0,0,0,0,2.63766978228454,0.247532705920093,0.662794751455832,0,0.602694528023977,0.730310090387373,0,0.492484232307152,2.04000691244253,2.82109249330279,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.40648818027883,4.3372698286148,1.00267582127178,2.89693037921647,0,1.94653948121054,0.283604451492204,0.665188192387692,0.702678285545008,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,1.8994576749687,0.926864265692532,8.60509862246441,1.06400514659507,1.12135520028461,2.1349799145941,6.41335625884616,0.311211035399766,0.404132016209064,0.490385709340376,0.908144565869588,1.15235184896,0,0,0.570471821544449,0.747243402759005,0.117434498643765,0.323745888736263,0.140450806702248,0.61246251376468,0.245668634623536,0.103325781175765,4.75201142912821,5.93440630268536,0.910161361938026,5.74894513452991,0.505008341862199,0.125118519871964,0,1.31693286264251,5.51678032438235,3.30523729594513,0.907457465280168,3.7671823494661,4.05759038755278,1.48352330811693,5.40163972951924,1.03052529238439,2.31876486041066,2.04728541964749,3.71307930930786,1.26668106709558,2.52433774244115,1.38074847963449,0.80823028409406,3.90510551768276,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,7.3504355692771,0,0,0,0,0,1.02940686179115,0,0,0,0,0.651616610620649,3.11980435583874,0,0.34779121492523,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0.904902010304444,3.57656445851882,4.22651376278,2.6593811658487,3.12022310734098,0.514414748524284,0,1.0656887160644,3.0025378668211,11.3950537132203,3.29296134712308,0.977208552881205,3.909311436168,2.37585561880029,0.301439377059586,0,0.099972991182057,0,0,0,4.31324739884849,3.44585807502342,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.542530047399471,5.8231841228626,5.35286966391485,4.25796520591624,1.99140405487612,0.300946099727719,0,1.03473071292505,1.32845119707087,0.921845842708516,0.60818530127658,0.195801157462741,4.46086450954113,0,0,0,0.606255142892519,3.32870879020994,3.93107381328584,1.98486246255021,2.76231551918512,7.57782254969299,4.61300937320523,0,11.5814823223397,5.93672265779964,1.23367755042124,3.37367278094941,0.98552587216571,1.55776328755086,0.813472649219715,0,0,0,1.03333003348146,2.36718518408732,1.83574180943194,0,0,0,0,0,0,0,0,1.54227252690289,0.812839312631559,1.50506932156456,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.660075999364704,0,0,3.21367859688319,0.386682873168488,0.154048617114644,0.307007349452259,0.689182862422653,0.751941714077915,1.88521702088497,0.426133137080504,4.00644160410318,0,0,0,0,0.464845549297286,5.66662224295152,0,1.23213432070436,0.532306030317022,0.869932992075073,0.55597265731176,0.143124886741991,0.372158369359667,0.949138274156178,4.76575484809562,0.767693373934002,0.42793898803392,0.636406495851874,0.78494864019923,0.539617372749944,3.29444435683266,2.00281083987667,0,1.58510321173008,1.26377536871694,0.975267478179181,1.21856744815642,1.05650146756755,1.22849920267187,3.11091950298168,1.13008116620243,1.10273068709225,0,0.438450885253763,1.15755106853338,2.62357900818653,0.202910376962704,0.92947049429925,1.12678241012897,0.430234056612155,1.76848273823618,0,0.709522128141196,1.68886108238131,2.30506425071931,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48831670129446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,0,0,0.335917362433631,3.60299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,1.72844298240254,1.30634944043764,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08956724041624,3.73941295755559,1.66441758450784,0.947015026375446,2.0125432140206,3.55924488638614,0.686520205190771,1.20984739010591,1.5543720058278,1.03498604992744,0.63718706865481,0.449803112163605,0.465788870628778,1.65882483136342,3.19010057469594,1.04349012362347,5.86004675089152,1.14241563650639,0.406870733204662,0.727394636810238,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| ||
|short_description=p@chr17:48269180..48269221,+ | |short_description=p@chr17:48269180..48269221,+ | ||
}} | }} |
Latest revision as of 18:35, 25 July 2015
Short description: | p@chr17:48269180..48269221, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48269180..48269221, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.02e-22 | 76 |
multi fate stem cell | 1.75e-14 | 427 |
somatic stem cell | 6.89e-14 | 433 |
stem cell | 4.00e-13 | 441 |
connective tissue cell | 7.98e-11 | 361 |
mesenchymal cell | 1.97e-10 | 354 |
preadipocyte | 3.70e-09 | 12 |
motile cell | 5.11e-09 | 386 |
mesenchymal stem cell of adipose | 9.90e-09 | 8 |
stromal cell | 1.90e-08 | 28 |
fat cell | 4.07e-07 | 15 |
mesenchymal stem cell of umbilical cord | 9.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.02e-11 | 371 |
adipose tissue | 8.89e-10 | 14 |
omentum | 7.80e-07 | 6 |
peritoneum | 7.80e-07 | 6 |
abdominal cavity | 7.80e-07 | 6 |
visceral peritoneum | 7.80e-07 | 6 |
mesenchyme of umbilical cord | 9.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.13e-07 | 5 |
myotonic disease | 2.13e-07 | 5 |
muscle tissue disease | 2.13e-07 | 5 |
myopathy | 2.13e-07 | 5 |
muscular disease | 2.13e-07 | 5 |
myotonic dystrophy | 2.13e-07 | 5 |