FFCP PHASE1:Hg19::chr17:47589320..47589331,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:47589320..47589331,+ | |||
|coexpression_cluster_id=C397 | |coexpression_cluster_id=C397 | ||
|description=CAGE_peak_at_chr17:47589320..47589331,+ | |description=CAGE_peak_at_chr17:47589320..47589331,+ | ||
|id=chr17:47589320..47589331,+ | |id=chr17:47589320..47589331,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;7.14e-26;2!CL:1000398;7.14e-26;2!CL:0000039;2.18e-08;7!CL:0000586;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,5.56e-26,2;CL:1000398,5.56e-26,2;CL:0000039,2.35e-08,7;CL:0000586,2.35e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!7.10e-07!2 | |ontology_enrichment_disease=DOID:1909!7.10e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.74e-10;22!DOID:2994;4.74e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.96e-10,22;DOID:2994,4.96e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002240!3.26e-10!3;UBERON:0003127!4.52e-07!2;UBERON:0007023!8.72e-07!115 | |ontology_enrichment_uberon=UBERON:0002240!3.26e-10!3;UBERON:0003127!4.52e-07!2;UBERON:0007023!8.72e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;7.14e-26;2!UBERON:0003497;7.14e-26;2!UBERON:0003909;7.14e-26;2!UBERON:0003835;7.14e-26;2!UBERON:0001280;9.45e-18;3!UBERON:0004647;9.45e-18;3!UBERON:0002346;1.13e-13;4!UBERON:0000923;1.13e-13;4!UBERON:0010316;1.13e-13;4!UBERON:0005291;1.13e-13;4!UBERON:0002050;3.26e-11;5!UBERON:0005423;3.26e-11;5!UBERON:0003513;2.18e-08;7!UBERON:0000473;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,5.56e-26,2;UBERON:0003497,5.56e-26,2;UBERON:0003909,5.56e-26,2;UBERON:0003835,5.56e-26,2;UBERON:0001280,8.00e-18,3;UBERON:0004647,8.00e-18,3;UBERON:0005171,8.00e-18,3;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0003513,2.03e-08,7;UBERON:0000473,1.80e-07,8;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9 | |||
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| ||
|short_description=p@chr17:47589320..47589331,+ | |short_description=p@chr17:47589320..47589331,+ | ||
}} | }} |
Latest revision as of 18:21, 25 July 2015
Short description: | p@chr17:47589320..47589331, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:47589320..47589331, + |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 5.56e-26 | 2 |
endothelial cell of hepatic sinusoid | 5.56e-26 | 2 |
germ line cell | 2.35e-08 | 7 |
germ cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 5.56e-26 | 2 |
abdomen blood vessel | 5.56e-26 | 2 |
sinusoid | 5.56e-26 | 2 |
abdominal segment blood vessel | 5.56e-26 | 2 |
liver parenchyma | 8.00e-18 | 3 |
liver lobule | 8.00e-18 | 3 |
hepatic duct | 8.00e-18 | 3 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
trunk blood vessel | 2.03e-08 | 7 |
testis | 1.80e-07 | 8 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.96e-10 | 22 |
germ cell cancer | 4.96e-10 | 22 |