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FFCP PHASE1:Hg19::chr17:42983891..42983900,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=2670
|EntrezGene=entrezgene:2670
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=4235
|HGNC=HGNC:4235
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-20bp_to_U92979_5end
|association_with_transcript=-20bp_to_U92979_5end
|cluster_id=chr17:42983891..42983900,-
|coexpression_cluster_id=C4
|coexpression_cluster_id=C4
|description=CAGE_peak_31_at_GFAP_5end
|description=CAGE_peak_31_at_GFAP_5end

Revision as of 17:32, 25 July 2015

Short description:p31@GFAP
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_31_at_GFAP_5end
Coexpression cluster:C4_optic_corpus_substantia_medulla_spinal_thalamus_globus
Association with transcript: -20bp_to_U92979_5end
EntrezGene:2670
HGNC: 4235
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data