FFCP PHASE1:Hg19::chr17:42983891..42983900,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=entrezgene:2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=4235 | |HGNC=HGNC:4235 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_U92979_5end | |association_with_transcript=-20bp_to_U92979_5end | ||
|cluster_id=chr17:42983891..42983900,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_31_at_GFAP_5end | |description=CAGE_peak_31_at_GFAP_5end |
Revision as of 17:32, 25 July 2015
Short description: | p31@GFAP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -20bp_to_U92979_5end |
EntrezGene: | 2670 |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p31@GFAP |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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astrocyte of the cerebral cortex | 3.93e-10 | 3 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
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neural tube | 2.66e-71 | 56 |
neural rod | 2.66e-71 | 56 |
future spinal cord | 2.66e-71 | 56 |
neural keel | 2.66e-71 | 56 |
regional part of nervous system | 1.82e-57 | 53 |
regional part of brain | 1.82e-57 | 53 |
central nervous system | 4.12e-56 | 81 |
nervous system | 2.36e-54 | 89 |
neural plate | 7.06e-52 | 82 |
presumptive neural plate | 7.06e-52 | 82 |
Showing 1 to 10 of 98 entries