FFCP PHASE1:Hg19::chr17:39776987..39777014,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39776987..39777014,- | |||
|coexpression_cluster_id=C544 | |coexpression_cluster_id=C544 | ||
|description=CAGE_peak_at_chr17:39776987..39777014,- | |description=CAGE_peak_at_chr17:39776987..39777014,- | ||
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|ontology_enrichment_celltype=CL:0002076!3.87e-27!43;CL:0000066!4.53e-23!254;CL:0000223!1.69e-17!59;CL:0002368!2.85e-15!13;CL:0002159!3.34e-14!13;CL:0002251!1.10e-12!21;CL:0000622!1.77e-10!5;CL:0000154!1.23e-08!6;CL:0000244!1.36e-08!4;CL:0000731!1.36e-08!4;CL:0002202!2.60e-08!9;CL:0002632!2.60e-08!9;CL:0002328!1.46e-07!3;CL:0000068!4.32e-07!3;CL:0000069!4.32e-07!3;CL:0000307!4.32e-07!3;CL:0000377!4.32e-07!3;CL:0002623!9.15e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.87e-27!43;CL:0000066!4.53e-23!254;CL:0000223!1.69e-17!59;CL:0002368!2.85e-15!13;CL:0002159!3.34e-14!13;CL:0002251!1.10e-12!21;CL:0000622!1.77e-10!5;CL:0000154!1.23e-08!6;CL:0000244!1.36e-08!4;CL:0000731!1.36e-08!4;CL:0002202!2.60e-08!9;CL:0002632!2.60e-08!9;CL:0002328!1.46e-07!3;CL:0000068!4.32e-07!3;CL:0000069!4.32e-07!3;CL:0000307!4.32e-07!3;CL:0000377!4.32e-07!3;CL:0002623!9.15e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;5.47e-34;13!CL:0002076;9.08e-24;42!CL:0002202;5.24e-18;9!CL:0002632;5.24e-18;9!CL:0002328;5.68e-15;3!CL:0002159;5.77e-15;14!CL:0000622;1.09e-14;5!CL:0000307;4.16e-14;3!CL:0000154;2.92e-12;6!CL:0000317;3.51e-10;2!CL:1000448;3.51e-10;2!CL:0002308;3.51e-10;2!CL:0002140;3.51e-10;2!CL:0000575;4.62e-10;2!CL:0000362;2.50e-08;9!CL:0000150;3.37e-08;9!CL:0002077;6.05e-08;34!CL:0002251;1.62e-07;20!CL:0000240;2.81e-07;6!CL:0000311;2.81e-07;6!CL:0000079;2.81e-07;6!CL:0000237;2.81e-07;6!CL:0002231;5.64e-07;3!CL:0002623;7.48e-07;3 | |ontology_enrichment_celltype_v019=CL:0002368;5.47e-34;13!CL:0002076;9.08e-24;42!CL:0002202;5.24e-18;9!CL:0002632;5.24e-18;9!CL:0002328;5.68e-15;3!CL:0002159;5.77e-15;14!CL:0000622;1.09e-14;5!CL:0000307;4.16e-14;3!CL:0000154;2.92e-12;6!CL:0000317;3.51e-10;2!CL:1000448;3.51e-10;2!CL:0002308;3.51e-10;2!CL:0002140;3.51e-10;2!CL:0000575;4.62e-10;2!CL:0000362;2.50e-08;9!CL:0000150;3.37e-08;9!CL:0002077;6.05e-08;34!CL:0002251;1.62e-07;20!CL:0000240;2.81e-07;6!CL:0000311;2.81e-07;6!CL:0000079;2.81e-07;6!CL:0000237;2.81e-07;6!CL:0002231;5.64e-07;3!CL:0002623;7.48e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.91e-34,13;CL:0002076,4.91e-31,42;CL:0000223,2.72e-21,58;CL:0000066,2.35e-19,253;CL:0002202,5.18e-18,9;CL:0002632,5.18e-18,9;CL:0002328,4.51e-15,3;CL:0002159,6.52e-15,14;CL:0000622,1.89e-14,5;CL:0000068,5.11e-14,3;CL:0000069,5.11e-14,3;CL:0000307,5.11e-14,3;CL:0000377,5.11e-14,3;CL:0000154,4.61e-12,6;CL:0000575,2.80e-10,2;CL:0000317,4.23e-10,2;CL:1000448,4.23e-10,2;CL:0002308,4.23e-10,2;CL:0002140,4.23e-10,2;CL:0002077,2.77e-09,34;CL:0000362,2.87e-08,9;CL:0000150,4.53e-08,9;CL:0002321,9.15e-08,250;CL:0002251,1.83e-07,20;CL:0000240,2.66e-07,6;CL:0000311,2.66e-07,6;CL:0000079,2.66e-07,6;CL:0000237,2.66e-07,6;CL:0000036,2.66e-07,6;CL:0000357,2.66e-07,6;CL:0000114,2.66e-07,6;CL:0002231,4.17e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;4.16e-14;3!CL:0000223;4.76e-12;58!CL:0000357;2.81e-07;6!CL:0000114;2.81e-07;6 | |ontology_enrichment_development_v019=CL:0000377;4.16e-14;3!CL:0000223;4.76e-12;58!CL:0000357;2.81e-07;6!CL:0000114;2.81e-07;6 | ||
|ontology_enrichment_disease=DOID:1749!6.13e-12!14;DOID:305!6.83e-08!106 | |ontology_enrichment_disease=DOID:1749!6.13e-12!14;DOID:305!6.83e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.67e-20!72;UBERON:0000065!4.02e-16!53;UBERON:0004119!3.18e-15!169;UBERON:0000925!3.18e-15!169;UBERON:0006595!3.18e-15!169;UBERON:0001737!3.94e-15!9;UBERON:0001557!4.47e-13!19;UBERON:0000072!1.22e-12!46;UBERON:0000064!1.03e-10!219;UBERON:0008947!1.64e-10!38;UBERON:0003258!1.64e-10!38;UBERON:0000365!7.47e-10!5;UBERON:0000062!4.87e-09!511;UBERON:0000077!8.31e-09!130;UBERON:0000166!1.24e-08!21;UBERON:0000161!1.76e-08!35;UBERON:0001007!2.49e-08!155;UBERON:0001555!2.49e-08!155;UBERON:0007026!2.49e-08!155;UBERON:0005910!4.00e-08!6;UBERON:0000923!4.04e-08!604;UBERON:0005291!4.04e-08!604;UBERON:0006598!4.04e-08!604;UBERON:0002532!4.04e-08!604;UBERON:0002050!4.57e-08!605;UBERON:0005423!4.57e-08!605;UBERON:0000922!1.06e-07!612;UBERON:0000467!1.27e-07!625;UBERON:0000480!1.43e-07!626;UBERON:0004815!1.46e-07!3;UBERON:0002031!1.46e-07!3;UBERON:0000924!2.66e-07!173;UBERON:0006601!2.66e-07!173;UBERON:0000165!3.62e-07!28;UBERON:0000930!3.62e-07!28;UBERON:0004121!3.80e-07!169;UBERON:0003102!6.42e-07!95;UBERON:0001041!7.19e-07!98 | |ontology_enrichment_uberon=UBERON:0001004!3.67e-20!72;UBERON:0000065!4.02e-16!53;UBERON:0004119!3.18e-15!169;UBERON:0000925!3.18e-15!169;UBERON:0006595!3.18e-15!169;UBERON:0001737!3.94e-15!9;UBERON:0001557!4.47e-13!19;UBERON:0000072!1.22e-12!46;UBERON:0000064!1.03e-10!219;UBERON:0008947!1.64e-10!38;UBERON:0003258!1.64e-10!38;UBERON:0000365!7.47e-10!5;UBERON:0000062!4.87e-09!511;UBERON:0000077!8.31e-09!130;UBERON:0000166!1.24e-08!21;UBERON:0000161!1.76e-08!35;UBERON:0001007!2.49e-08!155;UBERON:0001555!2.49e-08!155;UBERON:0007026!2.49e-08!155;UBERON:0005910!4.00e-08!6;UBERON:0000923!4.04e-08!604;UBERON:0005291!4.04e-08!604;UBERON:0006598!4.04e-08!604;UBERON:0002532!4.04e-08!604;UBERON:0002050!4.57e-08!605;UBERON:0005423!4.57e-08!605;UBERON:0000922!1.06e-07!612;UBERON:0000467!1.27e-07!625;UBERON:0000480!1.43e-07!626;UBERON:0004815!1.46e-07!3;UBERON:0002031!1.46e-07!3;UBERON:0000924!2.66e-07!173;UBERON:0006601!2.66e-07!173;UBERON:0000165!3.62e-07!28;UBERON:0000930!3.62e-07!28;UBERON:0004121!3.80e-07!169;UBERON:0003102!6.42e-07!95;UBERON:0001041!7.19e-07!98 | ||
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| ||
|short_description=p@chr17:39776987..39777014,- | |short_description=p@chr17:39776987..39777014,- | ||
}} | }} |
Latest revision as of 16:46, 25 July 2015
Short description: | p@chr17:39776987..39777014, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39776987..39777014, - |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.51e-15 | 3 |
epithelium of bronchus | 4.51e-15 | 3 |
respiratory system | 1.06e-13 | 74 |
endoderm-derived structure | 8.43e-12 | 160 |
endoderm | 8.43e-12 | 160 |
presumptive endoderm | 8.43e-12 | 160 |
respiratory tract | 1.67e-11 | 54 |
tracheobronchial tree | 1.48e-10 | 15 |
lower respiratory tract | 1.48e-10 | 15 |
skin gland | 4.23e-10 | 2 |
epidermis gland | 4.23e-10 | 2 |
gland of integumental system | 4.23e-10 | 2 |
sebaceous gland | 4.23e-10 | 2 |
skin sebaceous gland | 4.23e-10 | 2 |
sweat gland | 4.23e-10 | 2 |
sweat gland placode | 4.23e-10 | 2 |
sebaceous gland placode | 4.23e-10 | 2 |
bronchus | 3.22e-09 | 5 |
respiratory primordium | 4.29e-08 | 38 |
endoderm of foregut | 4.29e-08 | 38 |
epithelial fold | 5.80e-08 | 47 |
surface structure | 6.22e-08 | 99 |
thoracic cavity element | 1.58e-07 | 34 |
thoracic cavity | 1.58e-07 | 34 |
skin epidermis | 2.69e-07 | 15 |
outer epithelium | 2.69e-07 | 15 |
enveloping layer of ectoderm | 2.69e-07 | 15 |
thoracic segment organ | 2.81e-07 | 35 |
epithelial bud | 8.95e-07 | 37 |