FFCP PHASE1:Hg19::chr17:39740090..39740108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39740090..39740108,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr17:39740090..39740108,+ | |description=CAGE_peak_at_chr17:39740090..39740108,+ | ||
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|ontology_enrichment_celltype=CL:0002076!7.92e-28!43;CL:0002159!1.16e-25!13;CL:0002368!4.05e-25!13;CL:0000223!4.18e-19!59;CL:0002202!2.05e-17!9;CL:0002632!2.05e-17!9;CL:0002328!4.10e-14!3;CL:0000068!4.28e-14!3;CL:0000069!4.28e-14!3;CL:0000307!4.28e-14!3;CL:0000377!4.28e-14!3;CL:0000622!5.73e-14!5;CL:0000362!6.79e-14!8;CL:0000066!7.67e-14!254;CL:0000349!1.11e-13!3;CL:0002577!1.11e-13!3;CL:0000240!2.04e-12!6;CL:0000311!2.04e-12!6;CL:0000079!2.04e-12!6;CL:0000237!2.04e-12!6;CL:0000036!2.04e-12!6;CL:0000357!2.04e-12!6;CL:0000114!2.04e-12!6;CL:0000154!1.18e-11!6;CL:0002077!3.46e-11!33;CL:0002327!1.74e-10!4;CL:0000575!7.24e-10!2;CL:0000317!1.22e-09!2;CL:1000448!1.22e-09!2;CL:0002308!1.22e-09!2;CL:0002140!1.22e-09!2;CL:0002251!4.64e-09!21;CL:0000312!7.13e-09!5;CL:0000150!8.69e-08!9;CL:0000220!5.29e-07!246;CL:0002321!6.72e-07!248 | |ontology_enrichment_celltype=CL:0002076!7.92e-28!43;CL:0002159!1.16e-25!13;CL:0002368!4.05e-25!13;CL:0000223!4.18e-19!59;CL:0002202!2.05e-17!9;CL:0002632!2.05e-17!9;CL:0002328!4.10e-14!3;CL:0000068!4.28e-14!3;CL:0000069!4.28e-14!3;CL:0000307!4.28e-14!3;CL:0000377!4.28e-14!3;CL:0000622!5.73e-14!5;CL:0000362!6.79e-14!8;CL:0000066!7.67e-14!254;CL:0000349!1.11e-13!3;CL:0002577!1.11e-13!3;CL:0000240!2.04e-12!6;CL:0000311!2.04e-12!6;CL:0000079!2.04e-12!6;CL:0000237!2.04e-12!6;CL:0000036!2.04e-12!6;CL:0000357!2.04e-12!6;CL:0000114!2.04e-12!6;CL:0000154!1.18e-11!6;CL:0002077!3.46e-11!33;CL:0002327!1.74e-10!4;CL:0000575!7.24e-10!2;CL:0000317!1.22e-09!2;CL:1000448!1.22e-09!2;CL:0002308!1.22e-09!2;CL:0002140!1.22e-09!2;CL:0002251!4.64e-09!21;CL:0000312!7.13e-09!5;CL:0000150!8.69e-08!9;CL:0000220!5.29e-07!246;CL:0002321!6.72e-07!248 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000240,1.05e-31,6;CL:0000311,1.05e-31,6;CL:0000079,1.05e-31,6;CL:0000237,1.05e-31,6;CL:0000036,1.05e-31,6;CL:0000357,1.05e-31,6;CL:0000114,1.05e-31,6;CL:0000312,4.43e-22,5;CL:0002202,2.47e-21,9;CL:0002632,2.47e-21,9;CL:0000362,2.60e-21,9;CL:0002159,3.90e-21,14;CL:0002328,7.90e-17,3;CL:0000068,9.26e-17,3;CL:0000069,9.26e-17,3;CL:0000307,9.26e-17,3;CL:0000377,9.26e-17,3;CL:0002577,1.88e-16,3;CL:0002368,7.25e-15,13;CL:0002076,4.61e-13,42;CL:0002336,7.68e-13,1;CL:0002261,7.68e-13,1;CL:0002170,7.68e-13,1;CL:0000622,2.71e-10,5;CL:0000223,2.73e-09,58;CL:0000154,1.00e-08,6;CL:0002077,1.14e-08,34;CL:0000066,1.62e-08,253;CL:0000575,2.58e-07,2;CL:0000317,4.17e-07,2;CL:1000448,4.17e-07,2;CL:0002308,4.17e-07,2;CL:0002140,4.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;1.14e-31;6!CL:0000114;1.14e-31;6!CL:0000377;8.55e-17;3!UBERON:0008814;4.42e-07;2!UBERON:0010056;4.42e-07;2 | |ontology_enrichment_development_v019=CL:0000357;1.14e-31;6!CL:0000114;1.14e-31;6!CL:0000377;8.55e-17;3!UBERON:0008814;4.42e-07;2!UBERON:0010056;4.42e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!9.64e-15!72;UBERON:0007196!1.44e-14!14;UBERON:0001558!1.44e-14!14;UBERON:0004815!4.10e-14!3;UBERON:0002031!4.10e-14!3;UBERON:0003102!8.47e-12!95;UBERON:0000166!1.28e-11!21;UBERON:0002185!1.07e-10!4;UBERON:0000165!1.09e-10!28;UBERON:0000930!1.09e-10!28;UBERON:0000065!1.28e-10!53;UBERON:0001911!1.74e-10!4;UBERON:0005333!1.74e-10!4;UBERON:0008425!1.74e-10!4;UBERON:0005311!1.74e-10!4;UBERON:0001987!2.24e-10!4;UBERON:0004340!2.24e-10!4;UBERON:0003126!3.39e-10!7;UBERON:0001005!3.39e-10!7;UBERON:0000161!3.62e-10!35;UBERON:0004119!1.18e-09!169;UBERON:0000925!1.18e-09!169;UBERON:0006595!1.18e-09!169;UBERON:0002419!1.22e-09!2;UBERON:0007771!1.22e-09!2;UBERON:0003297!1.22e-09!2;UBERON:0001821!1.22e-09!2;UBERON:0003487!1.22e-09!2;UBERON:0001820!1.22e-09!2;UBERON:0005089!1.22e-09!2;UBERON:0005088!1.22e-09!2;UBERON:0001444!1.54e-08!48;UBERON:0001003!8.59e-08!14;UBERON:0007376!8.59e-08!14;UBERON:0007383!8.59e-08!14;UBERON:0005631!1.44e-07!14;UBERON:0000158!1.44e-07!14;UBERON:0000072!1.75e-07!46;UBERON:0004121!5.63e-07!169;UBERON:0005178!5.89e-07!34;UBERON:0002224!5.89e-07!34 | |ontology_enrichment_uberon=UBERON:0001004!9.64e-15!72;UBERON:0007196!1.44e-14!14;UBERON:0001558!1.44e-14!14;UBERON:0004815!4.10e-14!3;UBERON:0002031!4.10e-14!3;UBERON:0003102!8.47e-12!95;UBERON:0000166!1.28e-11!21;UBERON:0002185!1.07e-10!4;UBERON:0000165!1.09e-10!28;UBERON:0000930!1.09e-10!28;UBERON:0000065!1.28e-10!53;UBERON:0001911!1.74e-10!4;UBERON:0005333!1.74e-10!4;UBERON:0008425!1.74e-10!4;UBERON:0005311!1.74e-10!4;UBERON:0001987!2.24e-10!4;UBERON:0004340!2.24e-10!4;UBERON:0003126!3.39e-10!7;UBERON:0001005!3.39e-10!7;UBERON:0000161!3.62e-10!35;UBERON:0004119!1.18e-09!169;UBERON:0000925!1.18e-09!169;UBERON:0006595!1.18e-09!169;UBERON:0002419!1.22e-09!2;UBERON:0007771!1.22e-09!2;UBERON:0003297!1.22e-09!2;UBERON:0001821!1.22e-09!2;UBERON:0003487!1.22e-09!2;UBERON:0001820!1.22e-09!2;UBERON:0005089!1.22e-09!2;UBERON:0005088!1.22e-09!2;UBERON:0001444!1.54e-08!48;UBERON:0001003!8.59e-08!14;UBERON:0007376!8.59e-08!14;UBERON:0007383!8.59e-08!14;UBERON:0005631!1.44e-07!14;UBERON:0000158!1.44e-07!14;UBERON:0000072!1.75e-07!46;UBERON:0004121!5.63e-07!169;UBERON:0005178!5.89e-07!34;UBERON:0002224!5.89e-07!34 | ||
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|short_description=p@chr17:39740090..39740108,+ | |short_description=p@chr17:39740090..39740108,+ | ||
}} | }} |
Latest revision as of 16:43, 25 July 2015
Short description: | p@chr17:39740090..39740108, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39740090..39740108, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 7.90e-17 | 3 |
epithelium of bronchus | 7.90e-17 | 3 |
tracheobronchial tree | 6.41e-13 | 15 |
lower respiratory tract | 6.41e-13 | 15 |
skin epidermis | 6.61e-13 | 15 |
outer epithelium | 6.61e-13 | 15 |
enveloping layer of ectoderm | 6.61e-13 | 15 |
placenta | 1.39e-12 | 4 |
allantois | 1.39e-12 | 4 |
bronchus | 1.77e-10 | 5 |
surface structure | 1.72e-08 | 99 |
extraembryonic membrane | 5.18e-08 | 14 |
membranous layer | 5.18e-08 | 14 |
trachea | 1.06e-07 | 7 |
respiratory airway | 1.06e-07 | 7 |
chorion | 1.43e-07 | 7 |
respiratory system | 3.97e-07 | 74 |
skin gland | 4.17e-07 | 2 |
epidermis gland | 4.17e-07 | 2 |
gland of integumental system | 4.17e-07 | 2 |
sebaceous gland | 4.17e-07 | 2 |
skin sebaceous gland | 4.17e-07 | 2 |
sweat gland | 4.17e-07 | 2 |
sweat gland placode | 4.17e-07 | 2 |
sebaceous gland placode | 4.17e-07 | 2 |