FFCP PHASE1:Hg19::chr17:38711096..38711107,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38711096..38711107,- | |||
|coexpression_cluster_id=C762 | |||
|description=CAGE_peak_at_chr17:38711096..38711107,- | |description=CAGE_peak_at_chr17:38711096..38711107,- | ||
|id=chr17:38711096..38711107,- | |id=chr17:38711096..38711107,- | ||
|ontology_enrichment_celltype=CL:0000738!9.92e-24!140;CL:0000988!4.65e-23!182;CL:0000037!2.27e-20!172;CL:0000566!2.27e-20!172;CL:0002087!5.54e-20!119;CL:0002032!7.16e-19!165;CL:0000837!7.16e-19!165;CL:0000838!2.85e-18!52;CL:0000542!7.65e-18!53;CL:0000051!7.65e-18!53;CL:0002031!1.55e-17!124;CL:0000080!3.23e-15!6;CL:0000453!3.89e-13!5;CL:0000945!3.96e-11!24;CL:0000826!3.96e-11!24;CL:0000785!1.67e-08!2;CL:0000955!1.67e-08!2;CL:0000818!1.67e-08!2;CL:0000954!1.67e-08!2;CL:0000816!1.67e-08!2;CL:0000084!7.66e-08!25;CL:0000827!7.66e-08!25;CL:0000990!2.78e-07!8;CL:0002057!5.36e-07!42 | |ontology_enrichment_celltype=CL:0000738!9.92e-24!140;CL:0000988!4.65e-23!182;CL:0000037!2.27e-20!172;CL:0000566!2.27e-20!172;CL:0002087!5.54e-20!119;CL:0002032!7.16e-19!165;CL:0000837!7.16e-19!165;CL:0000838!2.85e-18!52;CL:0000542!7.65e-18!53;CL:0000051!7.65e-18!53;CL:0002031!1.55e-17!124;CL:0000080!3.23e-15!6;CL:0000453!3.89e-13!5;CL:0000945!3.96e-11!24;CL:0000826!3.96e-11!24;CL:0000785!1.67e-08!2;CL:0000955!1.67e-08!2;CL:0000818!1.67e-08!2;CL:0000954!1.67e-08!2;CL:0000816!1.67e-08!2;CL:0000084!7.66e-08!25;CL:0000827!7.66e-08!25;CL:0000990!2.78e-07!8;CL:0002057!5.36e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000453;8.54e-31;5!CL:0000990;1.92e-17;8!CL:0000451;2.15e-14;10!CL:0000771;1.57e-09;2!CL:0000081;6.74e-07;11!CL:0000945;9.50e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,7.72e-31,5;CL:0000990,1.82e-17,8;CL:0000451,2.05e-14,10;CL:0000738,2.72e-11,136;CL:0000988,2.25e-10,177;CL:0000771,1.33e-09,2;CL:0002032,2.05e-09,161;CL:0000837,2.05e-09,161;CL:0000037,5.49e-09,168;CL:0000081,6.54e-07,11;CL:0000945,9.13e-07,24;CL:0000826,9.13e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.03e-17;1!DOID:0050177;1.03e-17;1!DOID:0050427;1.03e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.72e-18,1;DOID:0050177,8.72e-18,1;DOID:0050427,8.72e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.83e-13!102;UBERON:0003061!4.83e-13!102;UBERON:0002193!1.16e-12!112;UBERON:0004177!2.12e-12!7;UBERON:0000178!2.68e-08!15;UBERON:0000179!2.68e-08!15;UBERON:0000463!2.68e-08!15;UBERON:0002370!3.06e-08!4;UBERON:0005058!3.06e-08!4;UBERON:0009113!3.06e-08!4;UBERON:0003295!3.06e-08!4;UBERON:0005562!3.06e-08!4 | |ontology_enrichment_uberon=UBERON:0002390!4.83e-13!102;UBERON:0003061!4.83e-13!102;UBERON:0002193!1.16e-12!112;UBERON:0004177!2.12e-12!7;UBERON:0000178!2.68e-08!15;UBERON:0000179!2.68e-08!15;UBERON:0000463!2.68e-08!15;UBERON:0002370!3.06e-08!4;UBERON:0005058!3.06e-08!4;UBERON:0009113!3.06e-08!4;UBERON:0003295!3.06e-08!4;UBERON:0005562!3.06e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.50e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.88e-07,3;UBERON:0004854,6.88e-07,3;UBERON:0009034,6.88e-07,3;UBERON:0002095,6.88e-07,3;UBERON:0004782,6.88e-07,3;UBERON:0003281,6.88e-07,3;UBERON:0009664,6.88e-07,3;UBERON:0002296,6.88e-07,3;UBERON:0005602,6.88e-07,3;UBERON:0001179,6.88e-07,3;UBERON:0006293,6.88e-07,3 | |||
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| ||
|short_description=p@chr17:38711096..38711107,- | |short_description=p@chr17:38711096..38711107,- | ||
}} | }} |
Latest revision as of 16:33, 25 July 2015
Short description: | p@chr17:38711096..38711107, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38711096..38711107, - |
Coexpression cluster: | C762_splenic_migratory_b_B_cord_CD14_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.72e-31 | 5 |
conventional dendritic cell | 1.82e-17 | 8 |
dendritic cell | 2.05e-14 | 10 |
leukocyte | 2.72e-11 | 136 |
hematopoietic cell | 2.25e-10 | 177 |
eosinophil | 1.33e-09 | 2 |
hematopoietic oligopotent progenitor cell | 2.05e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-09 | 161 |
hematopoietic stem cell | 5.49e-09 | 168 |
blood cell | 6.54e-07 | 11 |
lymphocyte of B lineage | 9.13e-07 | 24 |
pro-B cell | 9.13e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.88e-07 | 3 |
gastrointestinal system mesentery | 6.88e-07 | 3 |
stomach region | 6.88e-07 | 3 |
mesentery | 6.88e-07 | 3 |
gastrointestinal system serosa | 6.88e-07 | 3 |
mesentery of stomach | 6.88e-07 | 3 |
gut mesentery | 6.88e-07 | 3 |
dorsal mesentery | 6.88e-07 | 3 |
dorsal mesogastrium | 6.88e-07 | 3 |
peritoneal cavity | 6.88e-07 | 3 |
spleen primordium | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 8.72e-18 | 1 |
monogenic disease | 8.72e-18 | 1 |
xeroderma pigmentosum | 8.72e-18 | 1 |