FFCP PHASE1:Hg19::chr17:38674958..38674964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38674958..38674964,+ | |||
|description=CAGE_peak_at_chr17:38674958..38674964,+ | |description=CAGE_peak_at_chr17:38674958..38674964,+ | ||
|id=chr17:38674958..38674964,+ | |id=chr17:38674958..38674964,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.92e-16!254;CL:0002368!4.17e-08!13;CL:0000548!7.66e-08!679;CL:0000004!7.66e-08!679;CL:0000255!7.66e-08!679;CL:0000012!1.19e-07!682;CL:0002076!1.54e-07!43;CL:0000223!1.71e-07!59;CL:0000063!7.93e-07!578 | |ontology_enrichment_celltype=CL:0000066!4.92e-16!254;CL:0002368!4.17e-08!13;CL:0000548!7.66e-08!679;CL:0000004!7.66e-08!679;CL:0000255!7.66e-08!679;CL:0000012!1.19e-07!682;CL:0002076!1.54e-07!43;CL:0000223!1.71e-07!59;CL:0000063!7.93e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.24e-18;3!CL:1001319;1.31e-14;1!CL:1000600;1.31e-14;1!CL:0002202;8.09e-07;9!CL:0002632;8.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.32e-18,3;CL:0000069,2.32e-18,3;CL:0000307,2.32e-18,3;CL:0000377,2.32e-18,3;CL:1001319,8.17e-15,1;CL:1000600,8.17e-15,1;CL:0002202,9.93e-07,9;CL:0002632,9.93e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.24e-18;3!UBERON:0007123;9.50e-12;5 | |||
|ontology_enrichment_disease=DOID:14566!9.08e-27!239;DOID:162!3.32e-26!235;DOID:305!1.03e-22!106;DOID:0050687!1.78e-20!143;DOID:299!6.99e-11!25;DOID:0050686!4.21e-10!137 | |ontology_enrichment_disease=DOID:14566!9.08e-27!239;DOID:162!3.32e-26!235;DOID:305!1.03e-22!106;DOID:0050687!1.78e-20!143;DOID:299!6.99e-11!25;DOID:0050686!4.21e-10!137 | ||
|ontology_enrichment_disease_v019=DOID:3112;4.71e-15;1!DOID:1749;4.01e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.73e-15,1;DOID:1749,3.44e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.31e-14;1!UBERON:0001256;1.31e-14;1!UBERON:0001259;1.31e-14;1!UBERON:0002046;9.50e-12;5!UBERON:0003126;1.59e-08;7!UBERON:0001005;1.59e-08;7!UBERON:0001255;5.94e-08;2!UBERON:0001556;5.94e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,8.17e-15,1;UBERON:0001256,8.17e-15,1;UBERON:0001259,8.17e-15,1;UBERON:0002046,1.15e-11,5;UBERON:0004117,1.15e-11,5;UBERON:0007689,1.15e-11,5;UBERON:0007123,1.15e-11,5;UBERON:0003091,1.15e-11,5;UBERON:0003126,2.07e-08,7;UBERON:0001005,2.07e-08,7;UBERON:0001255,4.69e-08,2;UBERON:0001556,4.69e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,1.46139224653261,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0.432807638929335,0,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.37428108081644,0,0.242721043499027,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0.508507300585533,0.945550727071745,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,1.02193298195737,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0.75901493089674,0,0.632994193584081,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.364909578431332,0.391329237864179,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0.627865836814451,0,0,0,0.520679215005393,0,0.435296032902013,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,1.50746117111426,0.19871461170299,0,0,0.0801588202515337,0,0.799238438328521,0,0,0,0,0,0.235694034616795,0.67952103036807,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.338693328263138,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0.670869375198532,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,1.62474530350739,0.151649117541648,0,0.470531639396343,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0.429642228169954,0,0,0,0.343395705182793,0,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0,0,0,0.506827321959218,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,1.46742878817343,0.693153996902029,0,0,0,0,0,0,0,2.12903492763126,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.345701962667338,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.4582137370881,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.630832124175395,0.327796715891087,0.380095503034311,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0,0,1.54666210360852,0,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,1.46139224653261,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0.432807638929335,0,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.37428108081644,0,0.242721043499027,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0.508507300585533,0.945550727071745,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,1.02193298195737,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0.75901493089674,0,0.632994193584081,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.364909578431332,0.391329237864179,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0.627865836814451,0,0,0,0.520679215005393,0,0.435296032902013,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,1.50746117111426,0.19871461170299,0,0,0.0801588202515337,0,0.799238438328521,0,0,0,0,0,0.235694034616795,0.67952103036807,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.338693328263138,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0.670869375198532,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,1.62474530350739,0.151649117541648,0,0.470531639396343,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0.429642228169954,0,0,0,0.343395705182793,0,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0,0,0,0.506827321959218,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,1.46742878817343,0.693153996902029,0,0,0,0,0,0,0,2.12903492763126,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.345701962667338,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.4582137370881,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.630832124175395,0.327796715891087,0.380095503034311,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0,0,1.54666210360852,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr17:38674958..38674964,+ | |short_description=p@chr17:38674958..38674964,+ | ||
}} | }} |
Latest revision as of 16:32, 25 July 2015
Short description: | p@chr17:38674958..38674964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38674958..38674964, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.32e-18 | 3 |
branched duct epithelial cell | 2.32e-18 | 3 |
tracheal epithelial cell | 2.32e-18 | 3 |
tracheoblast | 2.32e-18 | 3 |
bladder cell | 8.17e-15 | 1 |
lower urinary tract cell | 8.17e-15 | 1 |
epithelial cell of tracheobronchial tree | 9.93e-07 | 9 |
epithelial cell of lower respiratory tract | 9.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 8.17e-15 | 1 |
wall of urinary bladder | 8.17e-15 | 1 |
mucosa of urinary bladder | 8.17e-15 | 1 |
thyroid gland | 1.15e-11 | 5 |
pharyngeal pouch | 1.15e-11 | 5 |
thyroid diverticulum | 1.15e-11 | 5 |
pharyngeal pouch 2 | 1.15e-11 | 5 |
thyroid primordium | 1.15e-11 | 5 |
trachea | 2.07e-08 | 7 |
respiratory airway | 2.07e-08 | 7 |
urinary bladder | 4.69e-08 | 2 |
lower urinary tract | 4.69e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.73e-15 | 1 |
squamous cell carcinoma | 3.44e-09 | 14 |