FFCP PHASE1:Hg19::chr17:38172802..38172815,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38172802..38172815,+ | |||
|coexpression_cluster_id=C1432 | |coexpression_cluster_id=C1432 | ||
|description=CAGE_peak_at_chr17:38172802..38172815,+ | |description=CAGE_peak_at_chr17:38172802..38172815,+ | ||
|id=chr17:38172802..38172815,+ | |id=chr17:38172802..38172815,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.14e-12!32;CL:0002595!2.40e-11!5;CL:0002621!2.26e-10!3;CL:0000192!5.32e-09!42;CL:0000514!5.32e-09!42;CL:0002593!3.13e-08!2;CL:0000317!6.84e-08!2;CL:1000448!6.84e-08!2;CL:0002308!6.84e-08!2;CL:0002140!6.84e-08!2;CL:0000680!5.07e-07!57;CL:0000056!5.07e-07!57;CL:0000355!5.07e-07!57 | |ontology_enrichment_celltype=CL:0000359!1.14e-12!32;CL:0002595!2.40e-11!5;CL:0002621!2.26e-10!3;CL:0000192!5.32e-09!42;CL:0000514!5.32e-09!42;CL:0002593!3.13e-08!2;CL:0000317!6.84e-08!2;CL:1000448!6.84e-08!2;CL:0002308!6.84e-08!2;CL:0002140!6.84e-08!2;CL:0000680!5.07e-07!57;CL:0000056!5.07e-07!57;CL:0000355!5.07e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002593;1.98e-21;2!CL:0000317;1.57e-20;2!CL:1000448;1.57e-20;2!CL:0002308;1.57e-20;2!CL:0002140;1.57e-20;2!CL:0000359;4.83e-19;32!CL:0002138;1.54e-15;6!CL:0000192;7.41e-11;43!CL:0002539;1.32e-09;10!CL:0002595;3.90e-09;5!CL:0000622;8.84e-09;5!CL:0000154;1.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.88e-21,2;CL:0000317,1.92e-20,2;CL:1000448,1.92e-20,2;CL:0002308,1.92e-20,2;CL:0002140,1.92e-20,2;CL:0000359,4.79e-19,32;CL:0005020,1.01e-15,6;CL:0002138,1.01e-15,6;CL:0005022,1.01e-15,6;CL:0000192,6.10e-14,43;CL:0000514,6.10e-14,43;CL:0000187,1.08e-10,55;CL:0000680,4.32e-10,58;CL:0000056,4.32e-10,58;CL:0000355,4.32e-10,58;CL:0000393,1.51e-09,61;CL:0000211,1.51e-09,61;CL:0002539,1.53e-09,10;CL:0002595,3.83e-09,5;CL:0000622,9.57e-09,5;CL:0000222,2.27e-08,121;CL:0000154,1.98e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.54e-15;6!CL:0000514;7.41e-11;43!CL:0000355;7.78e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!3.01e-14!33;UBERON:0004571!3.01e-14!33;UBERON:0001637!2.89e-12!42;UBERON:0003509!2.89e-12!42;UBERON:0004572!2.89e-12!42;UBERON:0003834!2.40e-11!5;UBERON:0001533!2.40e-11!5;UBERON:0000486!5.84e-11!82;UBERON:0001949!2.26e-10!3;UBERON:0000055!7.29e-10!69;UBERON:0000914!1.96e-08!83;UBERON:0002329!1.96e-08!83;UBERON:0003077!1.96e-08!83;UBERON:0003059!1.96e-08!83;UBERON:0007282!1.96e-08!83;UBERON:0009618!1.96e-08!83;UBERON:0007285!1.96e-08!83;UBERON:0004290!2.73e-08!70;UBERON:0002456!3.13e-08!2;UBERON:0002119!3.20e-08!4;UBERON:0004531!3.20e-08!4;UBERON:0002049!4.16e-08!79;UBERON:0007798!4.16e-08!79;UBERON:0002419!6.84e-08!2;UBERON:0007771!6.84e-08!2;UBERON:0003297!6.84e-08!2;UBERON:0001821!6.84e-08!2;UBERON:0003487!6.84e-08!2;UBERON:0001820!6.84e-08!2;UBERON:0005089!6.84e-08!2;UBERON:0005088!6.84e-08!2;UBERON:0001981!1.28e-07!60;UBERON:0007500!1.28e-07!60;UBERON:0004537!1.28e-07!60;UBERON:0006965!1.28e-07!60;UBERON:0001134!1.86e-07!61;UBERON:0002036!1.86e-07!61;UBERON:0003082!1.86e-07!61;UBERON:0002385!4.01e-07!63;UBERON:0001015!4.01e-07!63;UBERON:0000383!4.01e-07!63;UBERON:0003513!4.50e-07!8 | |ontology_enrichment_uberon=UBERON:0004573!3.01e-14!33;UBERON:0004571!3.01e-14!33;UBERON:0001637!2.89e-12!42;UBERON:0003509!2.89e-12!42;UBERON:0004572!2.89e-12!42;UBERON:0003834!2.40e-11!5;UBERON:0001533!2.40e-11!5;UBERON:0000486!5.84e-11!82;UBERON:0001949!2.26e-10!3;UBERON:0000055!7.29e-10!69;UBERON:0000914!1.96e-08!83;UBERON:0002329!1.96e-08!83;UBERON:0003077!1.96e-08!83;UBERON:0003059!1.96e-08!83;UBERON:0007282!1.96e-08!83;UBERON:0009618!1.96e-08!83;UBERON:0007285!1.96e-08!83;UBERON:0004290!2.73e-08!70;UBERON:0002456!3.13e-08!2;UBERON:0002119!3.20e-08!4;UBERON:0004531!3.20e-08!4;UBERON:0002049!4.16e-08!79;UBERON:0007798!4.16e-08!79;UBERON:0002419!6.84e-08!2;UBERON:0007771!6.84e-08!2;UBERON:0003297!6.84e-08!2;UBERON:0001821!6.84e-08!2;UBERON:0003487!6.84e-08!2;UBERON:0001820!6.84e-08!2;UBERON:0005089!6.84e-08!2;UBERON:0005088!6.84e-08!2;UBERON:0001981!1.28e-07!60;UBERON:0007500!1.28e-07!60;UBERON:0004537!1.28e-07!60;UBERON:0006965!1.28e-07!60;UBERON:0001134!1.86e-07!61;UBERON:0002036!1.86e-07!61;UBERON:0003082!1.86e-07!61;UBERON:0002385!4.01e-07!63;UBERON:0001015!4.01e-07!63;UBERON:0000383!4.01e-07!63;UBERON:0003513!4.50e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.98e-21;2!UBERON:0002419;1.57e-20;2!UBERON:0007771;1.57e-20;2!UBERON:0003297;1.57e-20;2!UBERON:0001821;1.57e-20;2!UBERON:0003487;1.57e-20;2!UBERON:0001820;1.57e-20;2!UBERON:0004573;2.46e-16;33!UBERON:0004571;2.46e-16;33!UBERON:0001637;2.71e-12;42!UBERON:0003509;2.71e-12;42!UBERON:0004572;2.71e-12;42!UBERON:0001473;8.45e-12;8!UBERON:0004536;8.45e-12;8!UBERON:0006558;8.45e-12;8!UBERON:0004237;1.32e-09;10!UBERON:0004695;1.32e-09;10!UBERON:0002111;1.32e-09;10!UBERON:0004178;1.32e-09;10!UBERON:0002465;1.51e-09;10!UBERON:0003834;3.90e-09;5!UBERON:0001533;3.90e-09;5!UBERON:0000055;4.73e-09;65!UBERON:0002049;2.58e-08;75!UBERON:0007798;2.58e-08;75!UBERON:0003513;9.25e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.88e-21,2;UBERON:0002419,1.92e-20,2;UBERON:0007771,1.92e-20,2;UBERON:0003297,1.92e-20,2;UBERON:0001821,1.92e-20,2;UBERON:0003487,1.92e-20,2;UBERON:0001820,1.92e-20,2;UBERON:0005089,1.92e-20,2;UBERON:0005088,1.92e-20,2;UBERON:0004573,1.92e-18,33;UBERON:0004571,1.92e-18,33;UBERON:0000055,3.55e-16,68;UBERON:0001637,2.70e-14,42;UBERON:0003509,2.70e-14,42;UBERON:0004572,2.70e-14,42;UBERON:0002049,6.79e-14,78;UBERON:0007798,6.79e-14,78;UBERON:0001473,6.16e-12,8;UBERON:0004536,6.16e-12,8;UBERON:0006558,6.16e-12,8;UBERON:0004535,2.16e-11,109;UBERON:0001009,4.89e-11,112;UBERON:0002329,3.41e-10,71;UBERON:0003059,3.41e-10,71;UBERON:0007282,3.41e-10,71;UBERON:0004290,3.41e-10,71;UBERON:0009618,3.41e-10,71;UBERON:0003077,4.91e-10,72;UBERON:0007285,4.91e-10,72;UBERON:0007500,6.65e-10,59;UBERON:0001981,6.65e-10,59;UBERON:0004537,6.65e-10,59;UBERON:0006965,6.65e-10,59;UBERON:0007524,7.00e-10,73;UBERON:0002465,1.18e-09,10;UBERON:0004237,1.53e-09,10;UBERON:0004695,1.53e-09,10;UBERON:0002111,1.53e-09,10;UBERON:0004178,1.53e-09,10;UBERON:0001134,2.23e-09,62;UBERON:0002036,2.23e-09,62;UBERON:0003082,2.23e-09,62;UBERON:0007503,3.60e-09,78;UBERON:0003834,3.83e-09,5;UBERON:0001533,3.83e-09,5;UBERON:0002385,4.70e-09,64;UBERON:0001015,4.70e-09,64;UBERON:0000383,4.70e-09,64;UBERON:0004872,1.46e-08,83;UBERON:0000486,1.52e-08,83;UBERON:0003513,9.12e-07,7 | |||
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| ||
|short_description=p@chr17:38172802..38172815,+ | |short_description=p@chr17:38172802..38172815,+ | ||
}} | }} |
Latest revision as of 16:16, 25 July 2015
Short description: | p@chr17:38172802..38172815, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38172802..38172815, + |
Coexpression cluster: | C1432_mesenchymal_Smooth_Lymphatic_Preadipocyte_Sebocyte_CD14_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.88e-21 | 2 |
sebum secreting cell | 1.92e-20 | 2 |
epithelial cell of sweat gland | 1.92e-20 | 2 |
epithelial cell of skin gland | 1.92e-20 | 2 |
acinar cell of sebaceous gland | 1.92e-20 | 2 |
vascular associated smooth muscle cell | 4.79e-19 | 32 |
lymphangioblast | 1.01e-15 | 6 |
endothelial cell of lymphatic vessel | 1.01e-15 | 6 |
vascular lymphangioblast | 1.01e-15 | 6 |
smooth muscle cell | 6.10e-14 | 43 |
smooth muscle myoblast | 6.10e-14 | 43 |
muscle cell | 1.08e-10 | 55 |
muscle precursor cell | 4.32e-10 | 58 |
myoblast | 4.32e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.32e-10 | 58 |
electrically responsive cell | 1.51e-09 | 61 |
electrically active cell | 1.51e-09 | 61 |
aortic smooth muscle cell | 1.53e-09 | 10 |
smooth muscle cell of the subclavian artery | 3.83e-09 | 5 |
acinar cell | 9.57e-09 | 5 |
mesodermal cell | 2.27e-08 | 121 |
protein secreting cell | 1.98e-07 | 6 |