FFCP PHASE1:Hg19::chr17:36134616..36134621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:36134616..36134621,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr17:36134616..36134621,+ | |description=CAGE_peak_at_chr17:36134616..36134621,+ | ||
|id=chr17:36134616..36134621,+ | |id=chr17:36134616..36134621,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.95e-26!42;CL:0000860!6.48e-24!45;CL:0002009!7.19e-18!65;CL:0000557!4.01e-16!71;CL:0002194!5.68e-16!63;CL:0000576!5.68e-16!63;CL:0000040!5.68e-16!63;CL:0000559!5.68e-16!63;CL:0000839!4.05e-14!70;CL:0000159!9.74e-14!2;CL:0000766!8.46e-13!76;CL:0002031!5.34e-12!124;CL:0002087!4.40e-11!119;CL:0000738!3.21e-10!140;CL:0000763!3.59e-09!112;CL:0000049!3.59e-09!112;CL:0002032!3.92e-08!165;CL:0000837!3.92e-08!165;CL:0000313!7.03e-08!1;CL:0000037!1.17e-07!172;CL:0000566!1.17e-07!172;CL:0000319!1.51e-07!1;CL:0000946!4.09e-07!1;CL:0000786!4.09e-07!1;CL:0000980!4.09e-07!1;CL:0000988!4.79e-07!182 | |ontology_enrichment_celltype=CL:0002057!7.95e-26!42;CL:0000860!6.48e-24!45;CL:0002009!7.19e-18!65;CL:0000557!4.01e-16!71;CL:0002194!5.68e-16!63;CL:0000576!5.68e-16!63;CL:0000040!5.68e-16!63;CL:0000559!5.68e-16!63;CL:0000839!4.05e-14!70;CL:0000159!9.74e-14!2;CL:0000766!8.46e-13!76;CL:0002031!5.34e-12!124;CL:0002087!4.40e-11!119;CL:0000738!3.21e-10!140;CL:0000763!3.59e-09!112;CL:0000049!3.59e-09!112;CL:0002032!3.92e-08!165;CL:0000837!3.92e-08!165;CL:0000313!7.03e-08!1;CL:0000037!1.17e-07!172;CL:0000566!1.17e-07!172;CL:0000319!1.51e-07!1;CL:0000946!4.09e-07!1;CL:0000786!4.09e-07!1;CL:0000980!4.09e-07!1;CL:0000988!4.79e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.88e-21;1!CL:0000860;3.17e-20;33!CL:0002057;3.17e-20;33!CL:0000473;2.09e-16;39!CL:0000234;2.09e-16;39!CL:0000159;2.02e-11;2!CL:0000576;5.48e-08;48!CL:0000766;1.04e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.88e-21,1;CL:0000860,5.70e-17,42;CL:0002057,5.70e-17,42;CL:0000473,7.56e-15,48;CL:0000234,7.56e-15,48;CL:0002194,7.21e-12,59;CL:0000576,7.21e-12,59;CL:0000040,7.21e-12,59;CL:0000559,7.21e-12,59;CL:0002009,1.75e-11,61;CL:0000159,2.02e-11,2;CL:0000839,1.28e-10,66;CL:0000557,1.84e-10,67;CL:0000766,9.74e-10,72 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.60e-11;2!CL:0002057;8.05e-11;42 | |||
|ontology_enrichment_disease=DOID:2152!7.03e-08!1;DOID:3030!1.51e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.88e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0006947!2.02e-19!3;UBERON:0004054!2.02e-19!3;UBERON:0005904!1.05e-14!4;UBERON:0002371!5.44e-14!80;UBERON:0001474!8.15e-13!86;UBERON:0004765!1.75e-10!101;UBERON:0001434!1.75e-10!101;UBERON:0002390!2.36e-10!102;UBERON:0003061!2.36e-10!102;UBERON:0002193!3.59e-09!112;UBERON:0003135!3.68e-09!11;UBERON:0002405!7.40e-09!115;UBERON:0004911!7.03e-08!1;UBERON:0001301!8.00e-08!1;UBERON:0002113!1.17e-07!27;UBERON:0003918!1.17e-07!27;UBERON:0005095!1.17e-07!27;UBERON:0007687!1.17e-07!27;UBERON:0000998!1.61e-07!1;UBERON:0006868!1.61e-07!1;UBERON:0001000!1.72e-07!1;UBERON:0005352!1.72e-07!1;UBERON:0003081!3.76e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.88e-21;1!UBERON:0001301;3.12e-21;1!UBERON:0004909;2.02e-11;2!UBERON:0006947;5.73e-08;3!UBERON:0004054;5.73e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.88e-21,1;UBERON:0001301,2.82e-21,1;UBERON:0004909,2.02e-11,2;UBERON:0002371,3.17e-09,76;UBERON:0001474,1.51e-08,82;UBERON:0006947,5.54e-08,3;UBERON:0004054,5.54e-08,3;UBERON:0004765,8.76e-08,90;UBERON:0002405,1.57e-07,93;UBERON:0002390,3.85e-07,98;UBERON:0003061,3.85e-07,98;UBERON:0001434,5.38e-07,100 | |||
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|short_description=p@chr17:36134616..36134621,+ | |short_description=p@chr17:36134616..36134621,+ | ||
}} | }} |
Latest revision as of 15:53, 25 July 2015
Short description: | p@chr17:36134616..36134621, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:36134616..36134621, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.88e-21 | 1 |
classical monocyte | 5.70e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.70e-17 | 42 |
defensive cell | 7.56e-15 | 48 |
phagocyte | 7.56e-15 | 48 |
monopoietic cell | 7.21e-12 | 59 |
monocyte | 7.21e-12 | 59 |
monoblast | 7.21e-12 | 59 |
promonocyte | 7.21e-12 | 59 |
macrophage dendritic cell progenitor | 1.75e-11 | 61 |
seromucus secreting cell | 2.02e-11 | 2 |
myeloid lineage restricted progenitor cell | 1.28e-10 | 66 |
granulocyte monocyte progenitor cell | 1.84e-10 | 67 |
myeloid leukocyte | 9.74e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.88e-21 | 1 |
epididymis | 2.82e-21 | 1 |
epithelium of gonad | 2.02e-11 | 2 |
bone marrow | 3.17e-09 | 76 |
bone element | 1.51e-08 | 82 |
male genital duct | 5.54e-08 | 3 |
internal male genitalia | 5.54e-08 | 3 |
skeletal element | 8.76e-08 | 90 |
immune system | 1.57e-07 | 93 |
hematopoietic system | 3.85e-07 | 98 |
blood island | 3.85e-07 | 98 |
skeletal system | 5.38e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.88e-21 | 1 |