FFCP PHASE1:Hg19::chr17:3572550..3572570,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:3572550..3572570,+ | |||
|description=CAGE_peak_at_chr17:3572550..3572570,+ | |description=CAGE_peak_at_chr17:3572550..3572570,+ | ||
|id=chr17:3572550..3572570,+ | |id=chr17:3572550..3572570,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.84e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,3.35e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.91e-08;3!DOID:127;1.91e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.01e-08,3;DOID:127,1.01e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.84e-07;5!UBERON:0001533;1.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,3.35e-07,5;UBERON:0001533,3.35e-07,5 | |||
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|phase1_expression=0.181678379270557,1.49870366723688,0.140954404095971,0,2.23480547213644,1.74467704820074,0,0.631719873426831,0,0.245733936501509,2.79120467188971,0.218441372130172,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.816002764977012,0.940364164434263,0,0.273748850145768,0.87879847716362,0.229240217243854,0.57470412614962,0.236132343941038,0.393364276848904,0,0,0,1.204823675113,0.369754010166788,0.232401601740905,0.142169232487422,0,0,0.401088894940283,0,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.564727018627814,0.545812300115692,0.224723484445085,1.22433556948361,0,0,0.329851300186716,0.398927315243264,0.852449501065388,0,0.56738522469114,0,0,0,0.434377689410233,0,0,0.632924774881769,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,1.02800749499755,0,0.32592226663359,0,0,0.222820913770347,0,0.443067789167242,0,0.128091319725675,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,0,1.01392563272577,0,0.486634870302636,0,0.886917589850256,0.351339142772504,0.196468613246569,0.364295288292542,1.11235332835329,0,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,1.10047216776027,0.208994966536811,0,0.35576626268671,0,0,0,0.488124115096339,0,1.62028389576352,0,0,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.633152558322899,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.98667019366864,0.311211035399766,0.538842688278752,0.326923806226917,0.151357427644931,0.576175924479999,0,0.624320153660641,0.570471821544449,0.448346041655403,0.352303495931295,0.161872944368132,0.702254033511242,0,0.491337269247072,0,0,1.23633464639278,0,1.43723628363248,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0.901428353439581,0.226864366320042,0.179389635688862,0,0.211931901159562,0.900273288253207,0.309157587715317,0.772921620136887,0,0,0.0974370051611986,0.757301322732344,0.184099797284599,0.323292113637624,0.355009592516614,0.302256294682921,0.339121184620975,0.57978255948989,0.272746120590835,0.573609190778008,0.853815942907168,0.397589304964456,0.580969714347592,0.518305275076852,0.504641701751257,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,1.0647612003586,1.34867752062481,0.241011029883482,1.10293972732394,0.871517776369625,0.237270619111097,1.07865046528132,1.37355025587742,0,0,0,0.4115740113314,0,2.53510069643662,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.439001141634502,0,0.301586917234893,0.0925884451585296,0.325808305310325,0,0,0,0.234817388471643,0.288732895522148,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0,0.297262324577456,0,0.503946384596579,0.283550194484773,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.411309970813294,0.300343057843917,0,0,1.30788020649984,0.2933531432838,0.129271715757778,0,2.535908257668,0.26593811658487,0,0,0,0.799266537048298,0.285955987316295,1.08524321078289,0.823240336780769,0.325736184293735,0,0,0,0,0.599837947092342,2.43247561282381,0.502257091432126,4.21667878966063,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.358121926479791,0.224170287987055,0,0.215627574859517,0.513372145118994,0,0,0,0,1.91381625495949,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,1.96271887676878,0.157702415033935,0.117141414992713,0,0,0,0,0,0.60818530127658,0.391602314925481,0,0,0.647142602455851,0.213455115606889,0.303127571446259,0,0.30239029332968,0.744323423456331,0.153461973288062,0.841980283299221,0.384417447767103,0.511707249066704,0.804269605718038,1.48418066444991,1.07946785661859,0.532685175939381,0.164254312027618,2.07701771673448,1.04589340613963,0.483437798366489,1.40354529212299,0.828728900423067,0.114814448164607,1.27463817604702,0.262248829918848,0,0.15403067420883,0,1.46139224653261,0,0,1.02056223165909,0.647747748306418,1.54227252690289,0.270946437543853,0,0,1.66215201785745,0,0,0,0.512900250232778,0,0.325378394664303,0,0.27470839445503,0,0,1.30012049207304,0,0.290012154876366,0.770243085573222,0.614014698904518,0.551346289938122,0.107420244868274,0.435050081742686,0.0852266274161009,0.178064071293475,0.330569830721956,0.768760269460425,0.127612712494584,0.6069466851333,3.71876439437829,0.31481234683064,0,0,0,0.869932992075073,0,0.429374660225974,0,0,0.38126038784765,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0.545999645631943,0.989838023675989,1.13008116620243,1.10273068709225,1.3268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| ||
|short_description=p@chr17:3572550..3572570,+ | |short_description=p@chr17:3572550..3572570,+ | ||
}} | }} |
Latest revision as of 15:50, 25 July 2015
Short description: | p@chr17:3572550..3572570, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:3572550..3572570, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 3.35e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 3.35e-07 | 5 |
subclavian artery | 3.35e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.01e-08 | 3 |
leiomyoma | 1.01e-08 | 3 |