FFCP PHASE1:Hg19::chr17:28534879..28534889,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:28534879..28534889,- | |||
|coexpression_cluster_id=C514 | |||
|description=CAGE_peak_at_chr17:28534879..28534889,- | |||
|id=chr17:28534879..28534889,- | |||
|ontology_enrichment_celltype=CL:0005020!8.37e-69!6;CL:0002138!8.37e-69!6;CL:0005022!8.37e-69!6;CL:0002139!7.55e-55!24;CL:0000115!1.76e-37!35;CL:0002078!1.03e-29!44;CL:0002144!3.29e-23!3;CL:0000213!8.16e-23!57;CL:0000215!8.16e-23!57;CL:0000071!5.49e-15!18;CL:0002546!5.49e-15!18;CL:0000222!1.40e-10!119;CL:0002545!1.57e-09!2;CL:1000413!3.42e-08!9;CL:0000650!8.62e-07!3;CL:1000618!8.62e-07!3;CL:1001318!8.62e-07!3;CL:0002173!8.62e-07!3;CL:1000500!8.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.58e-74;6!CL:0002139;1.33e-33;24!CL:0002144;1.12e-17;3!CL:0002078;1.01e-16;45!CL:0000115;2.08e-16;36!CL:0000213;1.30e-08;58!CL:0000215;1.30e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.58e-74,6;CL:0002138,2.58e-74,6;CL:0005022,2.58e-74,6;CL:0002139,1.33e-33,24;CL:0000115,9.32e-23,36;CL:0002078,2.09e-18,45;CL:0002144,1.12e-17,3;CL:0000213,1.72e-14,58;CL:0000215,1.72e-14,58;CL:0000222,2.26e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.58e-74;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!1.06e-51!8;UBERON:0004536!1.06e-51!8;UBERON:0006558!1.06e-51!8;UBERON:0002465!2.00e-41!10;UBERON:0001915!3.29e-23!3;UBERON:0001982!3.29e-23!3;UBERON:0000055!9.61e-19!69;UBERON:0002049!2.72e-16!79;UBERON:0007798!2.72e-16!79;UBERON:0001986!5.49e-15!18;UBERON:0004638!5.49e-15!18;UBERON:0004852!5.49e-15!18;UBERON:0004535!2.90e-14!110;UBERON:0001009!7.27e-14!113;UBERON:0000487!2.51e-12!22;UBERON:0006914!6.93e-11!25;UBERON:0005800!1.57e-09!2;UBERON:0001515!1.57e-09!2;UBERON:0003915!3.42e-08!9;UBERON:0004700!3.42e-08!9;UBERON:0001917!3.42e-08!9;UBERON:0003567!8.62e-07!3;UBERON:0003838!8.62e-07!3;UBERON:0005169!8.62e-07!3;UBERON:0002321!8.62e-07!3;UBERON:0005215!8.62e-07!3;UBERON:0002303!8.62e-07!3;UBERON:0002319!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.57e-56;8!UBERON:0004536;4.57e-56;8!UBERON:0006558;4.57e-56;8!UBERON:0002465;4.18e-45;10!UBERON:0010523;1.12e-17;3!UBERON:0001915;1.12e-17;3!UBERON:0001982;1.12e-17;3!UBERON:0002405;2.09e-17;27!UBERON:0000055;1.14e-12;65!UBERON:0002193;1.01e-11;42!UBERON:0002049;2.33e-10;75!UBERON:0007798;2.33e-10;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.57e-56,8;UBERON:0004536,4.57e-56,8;UBERON:0006558,4.57e-56,8;UBERON:0002465,4.18e-45,10;UBERON:0010523,1.12e-17,3;UBERON:0001915,1.12e-17,3;UBERON:0001982,1.12e-17,3;UBERON:0000055,1.71e-12,68;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0004535,4.22e-08,109;UBERON:0001009,6.64e-08,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0.805658634218294,1.52054421143703,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21832238805369,8.7967247389556,4.18559134916116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:28534879..28534889,- | |||
}} |
Latest revision as of 15:14, 25 July 2015
Short description: | p@chr17:28534879..28534889, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:28534879..28534889, - |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.58e-74 | 6 |
endothelial cell of lymphatic vessel | 2.58e-74 | 6 |
vascular lymphangioblast | 2.58e-74 | 6 |
endothelial cell of vascular tree | 1.33e-33 | 24 |
endothelial cell | 9.32e-23 | 36 |
meso-epithelial cell | 2.09e-18 | 45 |
capillary endothelial cell | 1.12e-17 | 3 |
lining cell | 1.72e-14 | 58 |
barrier cell | 1.72e-14 | 58 |
mesodermal cell | 2.26e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.57e-56 | 8 |
lymph vasculature | 4.57e-56 | 8 |
lymphatic part of lymphoid system | 4.57e-56 | 8 |
lymphoid system | 4.18e-45 | 10 |
microcirculatory vessel | 1.12e-17 | 3 |
endothelium of capillary | 1.12e-17 | 3 |
capillary | 1.12e-17 | 3 |
vessel | 1.71e-12 | 68 |
vasculature | 5.31e-11 | 78 |
vascular system | 5.31e-11 | 78 |
cardiovascular system | 4.22e-08 | 109 |
circulatory system | 6.64e-08 | 112 |