FFCP PHASE1:Hg19::chr17:266731..266743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:266731..266743,- | |||
|coexpression_cluster_id=C2232 | |||
|description=CAGE_peak_at_chr17:266731..266743,- | |description=CAGE_peak_at_chr17:266731..266743,- | ||
|id=chr17:266731..266743,- | |id=chr17:266731..266743,- | ||
|ontology_enrichment_celltype=CL:0000838!7.66e-31!52;CL:0000542!4.07e-30!53;CL:0000051!4.07e-30!53;CL:0000791!2.21e-27!18;CL:0000789!2.21e-27!18;CL:0002420!2.21e-27!18;CL:0002419!2.21e-27!18;CL:0000790!2.21e-27!18;CL:0000084!2.62e-24!25;CL:0000827!2.62e-24!25;CL:0002087!2.38e-19!119;CL:0000625!2.52e-19!11;CL:0000738!3.53e-16!140;CL:0002031!1.62e-14!124;CL:0000624!1.67e-11!6;CL:0000037!1.81e-11!172;CL:0000566!1.81e-11!172;CL:0000988!2.37e-10!182;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000898!2.27e-09!3;CL:0000945!2.76e-09!24;CL:0000826!2.76e-09!24;CL:0000842!8.25e-09!3;CL:0002619!2.33e-08!3 | |ontology_enrichment_celltype=CL:0000838!7.66e-31!52;CL:0000542!4.07e-30!53;CL:0000051!4.07e-30!53;CL:0000791!2.21e-27!18;CL:0000789!2.21e-27!18;CL:0002420!2.21e-27!18;CL:0002419!2.21e-27!18;CL:0000790!2.21e-27!18;CL:0000084!2.62e-24!25;CL:0000827!2.62e-24!25;CL:0002087!2.38e-19!119;CL:0000625!2.52e-19!11;CL:0000738!3.53e-16!140;CL:0002031!1.62e-14!124;CL:0000624!1.67e-11!6;CL:0000037!1.81e-11!172;CL:0000566!1.81e-11!172;CL:0000988!2.37e-10!182;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000898!2.27e-09!3;CL:0000945!2.76e-09!24;CL:0000826!2.76e-09!24;CL:0000842!8.25e-09!3;CL:0002619!2.33e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000898;6.22e-12;3!CL:0000791;1.76e-11;18!CL:0000789;1.76e-11;18!CL:0002419;1.76e-11;18!CL:0000895;1.42e-09;1!CL:0000084;3.22e-08;25!CL:0000625;1.85e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,4.99e-12,3;CL:0000791,1.63e-11,18;CL:0000789,1.63e-11,18;CL:0002420,1.63e-11,18;CL:0002419,1.63e-11,18;CL:0000790,1.63e-11,18;CL:0000810,9.70e-10,1;CL:0000895,9.70e-10,1;CL:0002436,9.70e-10,1;CL:0002427,9.70e-10,1;CL:0002428,9.70e-10,1;CL:0002429,9.70e-10,1;CL:0002433,9.70e-10,1;CL:0002431,9.70e-10,1;CL:0002432,9.70e-10,1;CL:0000084,3.05e-08,25;CL:0000827,3.05e-08,25;CL:0000625,1.87e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.76e-11;18!CL:0002427;1.42e-09;1!UBERON:0001045;1.42e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.15e-08!15;UBERON:0000179!5.15e-08!15;UBERON:0000463!5.15e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!5.15e-08!15;UBERON:0000179!5.15e-08!15;UBERON:0000463!5.15e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.42e-09;1!UBERON:0001154;1.42e-09;1!UBERON:0001153;1.42e-09;1!UBERON:0009854;1.42e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.50e-10,1;UBERON:0001154,1.91e-09,1;UBERON:0001153,1.91e-09,1;UBERON:0001045,1.91e-09,1 | |||
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| ||
|short_description=p@chr17:266731..266743,- | |short_description=p@chr17:266731..266743,- | ||
}} | }} |
Latest revision as of 14:55, 25 July 2015
Short description: | p@chr17:266731..266743, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:266731..266743, - |
Coexpression cluster: | C2232_lymphangiectasia_CD4_diffuse_Burkitt_lymphoma_plasma_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 4.99e-12 | 3 |
mature alpha-beta T cell | 1.63e-11 | 18 |
alpha-beta T cell | 1.63e-11 | 18 |
immature T cell | 1.63e-11 | 18 |
mature T cell | 1.63e-11 | 18 |
immature alpha-beta T cell | 1.63e-11 | 18 |
CD4-positive, alpha-beta thymocyte | 9.70e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 9.70e-10 | 1 |
mature CD4 single-positive thymocyte | 9.70e-10 | 1 |
resting double-positive thymocyte | 9.70e-10 | 1 |
double-positive blast | 9.70e-10 | 1 |
CD69-positive double-positive thymocyte | 9.70e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 9.70e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 9.70e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 9.70e-10 | 1 |
T cell | 3.05e-08 | 25 |
pro-T cell | 3.05e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.87e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.50e-10 | 1 |
vermiform appendix | 1.91e-09 | 1 |
caecum | 1.91e-09 | 1 |
midgut | 1.91e-09 | 1 |