FFCP PHASE1:Hg19::chr17:1678349..1678364,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:1678349..1678364,+
|short_description=p@chr17:1678349..1678364,+
|description=CAGE_peak_at_chr17:1678349..1678364,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:1678349..1678364,+ | |||
|coexpression_cluster_id=C2396 | |||
|description=CAGE_peak_at_chr17:1678349..1678364,+ | |||
|id=chr17:1678349..1678364,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.67e-09!15;CL:0000325!1.53e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.55e-11;13!CL:0000135;3.81e-10;3!CL:0000388;3.81e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.58e-10,3;CL:0000388,3.58e-10,3;CL:0000136,4.35e-09,15;CL:0002600,6.70e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.67e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.81e-10;3!UBERON:0000043;3.81e-10;3!UBERON:0007845;3.81e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.58e-10,3;UBERON:0000043,3.58e-10,3;UBERON:0007845,3.58e-10,3 | |||
|phase1_expression=0.54503513781167,11.9896293378951,0.704772020479856,7.00513088471913,4.46961094427288,0.872338524100369,7.59899634504932,0.631719873426831,7.83556884599516,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.132409180813219,2.58152958673932,0,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0,0,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0,0.140450806702248,0,0.368502951935304,0.619954687054593,0,1.48360157567134,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0.150238058906597,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0,0,0,0.310983165046111,0.756962552626885,0.36497735907583,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,3.80265104465493,5.89696330006576,1.18157981336281,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952468414382536,0,0,1.71072446022705,1.43958489784653,0.600686115687835,2.00078502841405,0,0,0,0,7.15312891703765,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,4.88359444852299,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.542530047399471,0.623912584592421,1.42743191037729,0,0.117141414992713,0.300946099727719,6.82222512167955,2.0694614258501,0,0,0.781952530212746,0,1.71571711905428,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0.532685175939381,0,0.519254429183621,0.464841513839837,0.120859449591622,0.40101294060657,0,0.114814448164607,1.0925470080403,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,1.30151357865721,0.206082023295445,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.614014698904518,0.137836572484531,0.644521469209642,0.870100163485371,0.0852266274161009,0.356128142586949,0.165284915360978,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,1.28381696410176,0,0,0.539617372749944,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,1.83827061539827,1.13008116620243,0,0.66343897524122,0,1.73632660280006,1.9676842561399,0,0,0,0,0.0982490410131212,0,0,1.68886108238131,0.658589785919804,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0.179515288819544,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,3.21031058919516,0,0.364909578431332,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,2.44617335538842,0,0,0,0,0.193978032976839,0.353024506766001,2.25980740780532,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.458320848023367,0,0.199679000498991,1.28767814440971,0.223171457441873,0,0.360299883542404,0,0.787831823072237,1.7307330260045,1.48287796479207,0,0,0,0.544813624446302,0,0,0,0.449947783103001,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,4.2881719582402,0.662091970365432,0,1.08599920350743,0,0.979762080328227,0,0,0,0,0.879313402068495,2.65013777824443,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0.496166021811951,0.790446527591777,0,0,0,1.0027595760908,0,1.31149052283922,0,0,0.488105059607853,0.1251909307065,2.86704597845036,1.10929051536852,0.0620964029413835,1.10678907948985,0,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,1.25783950876288,0.889811221596536,0.457680136793847,0.453692771289717,0,0.147855149989634,0,0.449803112163605,0.155262956876259,1.24411862352257,0.53168342911599,0,0,0,0,0,0,0.464033759878494,0,2.00013882331577,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0.33946505990805,0,0.247871528518004,0,0,0,0,4.93746321166957,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0,0,0.39246546425257,0,0,0.913158720509496,0,0,2.57315559035963,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,2.3196288626764,2.91426595835484,0.233939463462106,0,0,0,0.439762066981716,0.301925687133347,0,0.437119121007915,0,1.22574160876953,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,1.0580536810308,6.32391530883477,3.69740502905135,2.59575937274273,0,0,0.126698501011437,0.203977659483963,0,0,0,1.06090177505535,0.803892390468535,0,0,1.0661699095049,0.952257725854961,0.129177819672012,0.0620747142958579,0,0.25458863311266,0.404234377916439,0.435433495793923,2.05339980651169,0,0.215166616178029,0.99798106963804,0,0,0,0,0,0.366724332548599,0.813792356631477,1.33151354837103,1.00636896795513,0 | |phase1_expression=0.54503513781167,11.9896293378951,0.704772020479856,7.00513088471913,4.46961094427288,0.872338524100369,7.59899634504932,0.631719873426831,7.83556884599516,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.132409180813219,2.58152958673932,0,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0,0,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0,0.140450806702248,0,0.368502951935304,0.619954687054593,0,1.48360157567134,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0.150238058906597,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0,0,0,0.310983165046111,0.756962552626885,0.36497735907583,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,3.80265104465493,5.89696330006576,1.18157981336281,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952468414382536,0,0,1.71072446022705,1.43958489784653,0.600686115687835,2.00078502841405,0,0,0,0,7.15312891703765,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,4.88359444852299,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.542530047399471,0.623912584592421,1.42743191037729,0,0.117141414992713,0.300946099727719,6.82222512167955,2.0694614258501,0,0,0.781952530212746,0,1.71571711905428,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0.532685175939381,0,0.519254429183621,0.464841513839837,0.120859449591622,0.40101294060657,0,0.114814448164607,1.0925470080403,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,1.30151357865721,0.206082023295445,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.614014698904518,0.137836572484531,0.644521469209642,0.870100163485371,0.0852266274161009,0.356128142586949,0.165284915360978,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,1.28381696410176,0,0,0.539617372749944,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,1.83827061539827,1.13008116620243,0,0.66343897524122,0,1.73632660280006,1.9676842561399,0,0,0,0,0.0982490410131212,0,0,1.68886108238131,0.658589785919804,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0.179515288819544,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,3.21031058919516,0,0.364909578431332,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,2.44617335538842,0,0,0,0,0.193978032976839,0.353024506766001,2.25980740780532,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.458320848023367,0,0.199679000498991,1.28767814440971,0.223171457441873,0,0.360299883542404,0,0.787831823072237,1.7307330260045,1.48287796479207,0,0,0,0.544813624446302,0,0,0,0.449947783103001,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,4.2881719582402,0.662091970365432,0,1.08599920350743,0,0.979762080328227,0,0,0,0,0.879313402068495,2.65013777824443,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0.496166021811951,0.790446527591777,0,0,0,1.0027595760908,0,1.31149052283922,0,0,0.488105059607853,0.1251909307065,2.86704597845036,1.10929051536852,0.0620964029413835,1.10678907948985,0,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,1.25783950876288,0.889811221596536,0.457680136793847,0.453692771289717,0,0.147855149989634,0,0.449803112163605,0.155262956876259,1.24411862352257,0.53168342911599,0,0,0,0,0,0,0.464033759878494,0,2.00013882331577,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0.33946505990805,0,0.247871528518004,0,0,0,0,4.93746321166957,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0,0,0.39246546425257,0,0,0.913158720509496,0,0,2.57315559035963,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,2.3196288626764,2.91426595835484,0.233939463462106,0,0,0,0.439762066981716,0.301925687133347,0,0.437119121007915,0,1.22574160876953,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,1.0580536810308,6.32391530883477,3.69740502905135,2.59575937274273,0,0,0.126698501011437,0.203977659483963,0,0,0,1.06090177505535,0.803892390468535,0,0,1.0661699095049,0.952257725854961,0.129177819672012,0.0620747142958579,0,0.25458863311266,0.404234377916439,0.435433495793923,2.05339980651169,0,0.215166616178029,0.99798106963804,0,0,0,0,0,0.366724332548599,0.813792356631477,1.33151354837103,1.00636896795513,0 | ||
|short_description=p@chr17:1678349..1678364,+ | |||
}} | }} |
Latest revision as of 14:14, 25 July 2015
Short description: | p@chr17:1678349..1678364, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1678349..1678364, + |
Coexpression cluster: | C2396_Adipocyte_Hepatocyte_Mesenchymal_normal_tenocyte_Osteoblast_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.58e-10 | 3 |
tendon cell | 3.58e-10 | 3 |
fat cell | 4.35e-09 | 15 |
smooth muscle cell of trachea | 6.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.58e-10 | 3 |
tendon | 3.58e-10 | 3 |
regular connective tissue | 3.58e-10 | 3 |