FFCP PHASE1:Hg19::chr17:16323425..16323480,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:16323425..16323480,+
|short_description=p@chr17:16323425..16323480,+
|description=CAGE_peak_at_chr17:16323425..16323480,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:16323425..16323480,+ | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr17:16323425..16323480,+ | |||
|id=chr17:16323425..16323480,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-20!180;CL:0002371!8.50e-11!591;CL:0000144!1.68e-09!625;CL:0000057!3.55e-09!75;CL:0000048!1.22e-08!430;CL:0000723!4.04e-08!436;CL:0002551!4.22e-08!6;CL:0000003!6.01e-08!722;CL:0000192!1.30e-07!42;CL:0000514!1.30e-07!42;CL:0000034!1.86e-07!444;CL:0000548!2.28e-07!679;CL:0000004!2.28e-07!679;CL:0000255!2.28e-07!679;CL:0000183!2.44e-07!59;CL:0000680!2.64e-07!57;CL:0000056!2.64e-07!57;CL:0000355!2.64e-07!57;CL:0000187!2.95e-07!54;CL:0000219!3.65e-07!390;CL:0000012!3.83e-07!682;CL:0002552!9.66e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.86e-14;3!CL:0000148;3.54e-11;10!CL:0002554;6.90e-10;2!CL:0002552;8.14e-09;5!CL:0000147;6.69e-08;14!CL:0002573;1.50e-07;2!CL:0002556;2.06e-07;6!CL:0002551;3.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.26e-14,3;CL:0000148,2.69e-11,10;CL:0000541,2.69e-11,10;CL:0000333,7.76e-11,41;CL:0002554,2.43e-10,2;CL:0000057,5.40e-10,76;CL:0002552,6.36e-09,5;CL:0000147,5.53e-08,14;CL:0002551,1.40e-07,6;CL:0002573,1.51e-07,2;CL:0002556,2.33e-07,6;CL:0000133,5.28e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.35e-11!83;UBERON:0002329!1.35e-11!83;UBERON:0003077!1.35e-11!83;UBERON:0003059!1.35e-11!83;UBERON:0007282!1.35e-11!83;UBERON:0009618!1.35e-11!83;UBERON:0007285!1.35e-11!83;UBERON:0004290!5.48e-10!70;UBERON:0000486!1.05e-07!82;UBERON:0002067!7.00e-07!9;UBERON:0004016!7.00e-07!9;UBERON:0010083!7.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.96e-08;9!UBERON:0001758;2.06e-07;6!UBERON:0003672;2.06e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.34e-08,9;UBERON:0004016,1.34e-08,9;UBERON:0010083,1.34e-08,9;UBERON:0002329,7.08e-08,71;UBERON:0003059,7.08e-08,71;UBERON:0007282,7.08e-08,71;UBERON:0004290,7.08e-08,71;UBERON:0009618,7.08e-08,71;UBERON:0003077,9.89e-08,72;UBERON:0007285,9.89e-08,72;UBERON:0007524,1.37e-07,73;UBERON:0001758,2.33e-07,6;UBERON:0003672,2.33e-07,6;UBERON:0007503,6.12e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0.975865597581014,0.123121058076788,1.42800483870977,0,0,0.273748850145768,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,1.40592859100278,1.5608003841516,0.570471821544449,0.597794722207204,1.87895197830024,0.971237666208789,1.68540968042698,1.63323337003915,2.7023549808589,0.619954687054593,1.18800285728205,0.247266929278557,1.82032272387605,1.43723628363248,1.17835279767846,2.00189631795143,1.38532057742091,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0.383382679165211,0,0.264145302039678,0.621984346622316,1.15295962733569,1.13618190083742,1.58744735730423,1.14596527667483,1.17217447210047,3.4214489204541,0.925447434329912,1.8020583470635,0.571652865261156,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0.797814349754612,0,0.514414748524284,1.41849132023278,0.532844358032199,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0.821905290201534,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0.695068915744663,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,1.06537035187876,0.657017248110473,0,0.232420756919918,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0,0,0,0,0,0,0,0,0,0,1.3940745403212,0,1.06461206063404,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,1.535386747868,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0.606547444719948,0,0,0.48763373908959,0,1.05650146756755,0,0.282810863907425,0,1.65409603063837,0,0.438450885253763,0,0,0,0.6196469961995,1.12678241012897,1.14729081763241,0.0982490410131212,0.35667105148125,1.06428319221179,0,0,0.379473173765715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,2.22724939116194,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0,0.222617410045812,0.659215496907038,0,0,0,0,2.45444838005172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0.332423363800313,0,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.627865836814451,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0.19980960958213,0,0,0,0.432164393964449,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,2.54486814322951,0.170388021785422,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,0.285465333544967,0.941063278792687,0,0,0.298509605773748,0,0.554805861502613,0.568209015825267,0.754703705257725,0,0,0.151230923763239,0.777186002913902,0,0,0,0.310525913752519,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7381560971652,12.952437523392,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.76447435857846,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 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| ||
|short_description=p@chr17:16323425..16323480,+ | |||
}} | }} |
Latest revision as of 14:10, 25 July 2015
Short description: | p@chr17:16323425..16323480, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:16323425..16323480, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.26e-14 | 3 |
melanocyte | 2.69e-11 | 10 |
melanoblast | 2.69e-11 | 10 |
migratory neural crest cell | 7.76e-11 | 41 |
fibroblast of lymphatic vessel | 2.43e-10 | 2 |
fibroblast | 5.40e-10 | 76 |
fibroblast of gingiva | 6.36e-09 | 5 |
pigment cell | 5.53e-08 | 14 |
fibroblast of dermis | 1.40e-07 | 6 |
Schwann cell | 1.51e-07 | 2 |
fibroblast of periodontium | 2.33e-07 | 6 |
neurectodermal cell | 5.28e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.34e-08 | 9 |
dermatome | 1.34e-08 | 9 |
future dermis | 1.34e-08 | 9 |
somite | 7.08e-08 | 71 |
presomitic mesoderm | 7.08e-08 | 71 |
presumptive segmental plate | 7.08e-08 | 71 |
dermomyotome | 7.08e-08 | 71 |
trunk paraxial mesoderm | 7.08e-08 | 71 |
paraxial mesoderm | 9.89e-08 | 72 |
presumptive paraxial mesoderm | 9.89e-08 | 72 |
dense mesenchyme tissue | 1.37e-07 | 73 |
periodontium | 2.33e-07 | 6 |
dentition | 2.33e-07 | 6 |
epithelial vesicle | 6.12e-07 | 78 |