FFCP PHASE1:Hg19::chr17:16323425..16323480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:16323425..16323480,+ | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr17:16323425..16323480,+ | |description=CAGE_peak_at_chr17:16323425..16323480,+ | ||
|id=chr17:16323425..16323480,+ | |id=chr17:16323425..16323480,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.28e-20!180;CL:0002371!8.50e-11!591;CL:0000144!1.68e-09!625;CL:0000057!3.55e-09!75;CL:0000048!1.22e-08!430;CL:0000723!4.04e-08!436;CL:0002551!4.22e-08!6;CL:0000003!6.01e-08!722;CL:0000192!1.30e-07!42;CL:0000514!1.30e-07!42;CL:0000034!1.86e-07!444;CL:0000548!2.28e-07!679;CL:0000004!2.28e-07!679;CL:0000255!2.28e-07!679;CL:0000183!2.44e-07!59;CL:0000680!2.64e-07!57;CL:0000056!2.64e-07!57;CL:0000355!2.64e-07!57;CL:0000187!2.95e-07!54;CL:0000219!3.65e-07!390;CL:0000012!3.83e-07!682;CL:0002552!9.66e-07!5 | |ontology_enrichment_celltype=CL:0000055!1.28e-20!180;CL:0002371!8.50e-11!591;CL:0000144!1.68e-09!625;CL:0000057!3.55e-09!75;CL:0000048!1.22e-08!430;CL:0000723!4.04e-08!436;CL:0002551!4.22e-08!6;CL:0000003!6.01e-08!722;CL:0000192!1.30e-07!42;CL:0000514!1.30e-07!42;CL:0000034!1.86e-07!444;CL:0000548!2.28e-07!679;CL:0000004!2.28e-07!679;CL:0000255!2.28e-07!679;CL:0000183!2.44e-07!59;CL:0000680!2.64e-07!57;CL:0000056!2.64e-07!57;CL:0000355!2.64e-07!57;CL:0000187!2.95e-07!54;CL:0000219!3.65e-07!390;CL:0000012!3.83e-07!682;CL:0002552!9.66e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.86e-14;3!CL:0000148;3.54e-11;10!CL:0002554;6.90e-10;2!CL:0002552;8.14e-09;5!CL:0000147;6.69e-08;14!CL:0002573;1.50e-07;2!CL:0002556;2.06e-07;6!CL:0002551;3.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.26e-14,3;CL:0000148,2.69e-11,10;CL:0000541,2.69e-11,10;CL:0000333,7.76e-11,41;CL:0002554,2.43e-10,2;CL:0000057,5.40e-10,76;CL:0002552,6.36e-09,5;CL:0000147,5.53e-08,14;CL:0002551,1.40e-07,6;CL:0002573,1.51e-07,2;CL:0002556,2.33e-07,6;CL:0000133,5.28e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.35e-11!83;UBERON:0002329!1.35e-11!83;UBERON:0003077!1.35e-11!83;UBERON:0003059!1.35e-11!83;UBERON:0007282!1.35e-11!83;UBERON:0009618!1.35e-11!83;UBERON:0007285!1.35e-11!83;UBERON:0004290!5.48e-10!70;UBERON:0000486!1.05e-07!82;UBERON:0002067!7.00e-07!9;UBERON:0004016!7.00e-07!9;UBERON:0010083!7.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.96e-08;9!UBERON:0001758;2.06e-07;6!UBERON:0003672;2.06e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.34e-08,9;UBERON:0004016,1.34e-08,9;UBERON:0010083,1.34e-08,9;UBERON:0002329,7.08e-08,71;UBERON:0003059,7.08e-08,71;UBERON:0007282,7.08e-08,71;UBERON:0004290,7.08e-08,71;UBERON:0009618,7.08e-08,71;UBERON:0003077,9.89e-08,72;UBERON:0007285,9.89e-08,72;UBERON:0007524,1.37e-07,73;UBERON:0001758,2.33e-07,6;UBERON:0003672,2.33e-07,6;UBERON:0007503,6.12e-07,78 | |||
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|short_description=p@chr17:16323425..16323480,+ | |short_description=p@chr17:16323425..16323480,+ | ||
}} | }} |
Latest revision as of 14:10, 25 July 2015
Short description: | p@chr17:16323425..16323480, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:16323425..16323480, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.26e-14 | 3 |
melanocyte | 2.69e-11 | 10 |
melanoblast | 2.69e-11 | 10 |
migratory neural crest cell | 7.76e-11 | 41 |
fibroblast of lymphatic vessel | 2.43e-10 | 2 |
fibroblast | 5.40e-10 | 76 |
fibroblast of gingiva | 6.36e-09 | 5 |
pigment cell | 5.53e-08 | 14 |
fibroblast of dermis | 1.40e-07 | 6 |
Schwann cell | 1.51e-07 | 2 |
fibroblast of periodontium | 2.33e-07 | 6 |
neurectodermal cell | 5.28e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.34e-08 | 9 |
dermatome | 1.34e-08 | 9 |
future dermis | 1.34e-08 | 9 |
somite | 7.08e-08 | 71 |
presomitic mesoderm | 7.08e-08 | 71 |
presumptive segmental plate | 7.08e-08 | 71 |
dermomyotome | 7.08e-08 | 71 |
trunk paraxial mesoderm | 7.08e-08 | 71 |
paraxial mesoderm | 9.89e-08 | 72 |
presumptive paraxial mesoderm | 9.89e-08 | 72 |
dense mesenchyme tissue | 1.37e-07 | 73 |
periodontium | 2.33e-07 | 6 |
dentition | 2.33e-07 | 6 |
epithelial vesicle | 6.12e-07 | 78 |