FFCP PHASE1:Hg19::chr17:12453311..12453329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000313495,uc002gnl.1,uc002gnm.1_5end | |association_with_transcript=25bp_to_ENST00000313495,uc002gnl.1,uc002gnm.1_5end | ||
|cluster_id=chr17:12453311..12453329,+ | |||
|description=CAGE_peak_1_at_ENST00000313495_5end,CAGE_peak_1_at_uc002gnl.1_5end,CAGE_peak_1_at_uc002gnm.1_5end | |description=CAGE_peak_1_at_ENST00000313495_5end,CAGE_peak_1_at_uc002gnl.1_5end,CAGE_peak_1_at_uc002gnm.1_5end | ||
|id=chr17:12453311..12453329,+ | |id=chr17:12453311..12453329,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.02e-08!32;CL:0000680!1.67e-08!57;CL:0000056!1.67e-08!57;CL:0000355!1.67e-08!57;CL:0000192!1.17e-07!42;CL:0000514!1.17e-07!42;CL:0002594!3.88e-07!4 | |ontology_enrichment_celltype=CL:0000359!1.02e-08!32;CL:0000680!1.67e-08!57;CL:0000056!1.67e-08!57;CL:0000355!1.67e-08!57;CL:0000192!1.17e-07!42;CL:0000514!1.17e-07!42;CL:0002594!3.88e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.42e-15;2!UBERON:0000358;1.46e-08;1!UBERON:0004874;1.46e-08;1!UBERON:0005062;4.98e-08;4!UBERON:0007284;4.98e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;1.46e-08;1!DOID:2513;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.63e-08,1;DOID:2513,1.88e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.61e-10!84;UBERON:0002385!8.18e-10!63;UBERON:0001015!8.18e-10!63;UBERON:0000383!8.18e-10!63;UBERON:0001981!8.54e-09!60;UBERON:0007500!8.54e-09!60;UBERON:0004537!8.54e-09!60;UBERON:0006965!8.54e-09!60;UBERON:0001134!1.51e-08!61;UBERON:0002036!1.51e-08!61;UBERON:0003082!1.51e-08!61;UBERON:0000055!1.08e-07!69;UBERON:0002049!2.37e-07!79;UBERON:0007798!2.37e-07!79;UBERON:0001310!3.88e-07!4;UBERON:0001009!4.42e-07!113;UBERON:0003978!8.86e-07!3;UBERON:0009751!8.86e-07!3;UBERON:0000946!8.86e-07!3;UBERON:0002523!8.86e-07!3;UBERON:0005983!8.86e-07!3;UBERON:0002165!8.86e-07!3;UBERON:0002062!8.86e-07!3;UBERON:0007280!8.86e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.00e-10;3!UBERON:0000946;2.00e-10;3!UBERON:0002146;1.01e-08;1!UBERON:0005623;1.01e-08;1!UBERON:0000989;1.46e-08;1!UBERON:0008811;1.46e-08;1!UBERON:0002134;3.56e-08;1!UBERON:0005208;3.56e-08;1!UBERON:0004145;3.56e-08;1!UBERON:0005946;3.56e-08;1!UBERON:0005965;3.56e-08;1!UBERON:0002078;3.56e-08;1!UBERON:0002331;8.61e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.48e-10,3;UBERON:0009751,1.48e-10,3;UBERON:0000946,1.48e-10,3;UBERON:0002523,1.48e-10,3;UBERON:0005983,1.48e-10,3;UBERON:0002165,1.48e-10,3;UBERON:0002062,1.48e-10,3;UBERON:0007280,1.48e-10,3;UBERON:0004797,1.32e-09,7;UBERON:0002146,1.05e-08,1;UBERON:0005623,1.05e-08,1;UBERON:0000989,1.31e-08,1;UBERON:0008811,1.31e-08,1;UBERON:0006258,1.31e-08,1;UBERON:0005876,1.31e-08,1;UBERON:0004874,1.31e-08,1;UBERON:0002134,2.17e-08,1;UBERON:0005208,2.17e-08,1;UBERON:0005946,2.17e-08,1;UBERON:0005965,2.17e-08,1;UBERON:0002078,2.17e-08,1;UBERON:0007500,3.38e-08,59;UBERON:0001981,3.38e-08,59;UBERON:0004537,3.38e-08,59;UBERON:0006965,3.38e-08,59;UBERON:0000055,6.28e-07,68;UBERON:0002331,7.27e-07,10;UBERON:0000358,7.27e-07,10;UBERON:0000307,7.27e-07,10;UBERON:0000091,7.27e-07,10;UBERON:0000087,7.27e-07,10;UBERON:0007010,7.27e-07,10;UBERON:0007806,7.27e-07,10;UBERON:0008780,7.27e-07,10;UBERON:0005728,7.27e-07,10;UBERON:0004872,9.00e-07,83 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.579386075843295,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,1.05927344650575,0,0,0,3.20246987189115,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,1.28820270022815,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,1.91699884393266,1.14861935834114,0,1.44781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,1.24900292158013,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0.532306030317022,0,0.9266210955196,5.72499546967965,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0.876901770507525,0,0,1.01455188481352,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,9.96239941255349,0.276283915531148,0,0,0,1.86623752597084,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,9.39557738447903,1.43574604915363,0.199679000498991,0.429226048136571,0,0.470284307407084,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,1.17466153824464,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.318593534327405,0,0.155262956876259,0,0,1.04349012362347,0,0,0.406870733204662,1.27294061441792,0,0.464033759878494,0.796191777397232,1.20008329398946,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0.322289439867886,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,2.34640942403454,0.733448665097199,0.406896178315738,0.665756774185513,2.41528552309231,0 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|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.579386075843295,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,1.05927344650575,0,0,0,3.20246987189115,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,1.28820270022815,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,1.91699884393266,1.14861935834114,0,1.44781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,1.24900292158013,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0.532306030317022,0,0.9266210955196,5.72499546967965,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0.876901770507525,0,0,1.01455188481352,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,9.96239941255349,0.276283915531148,0,0,0,1.86623752597084,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,9.39557738447903,1.43574604915363,0.199679000498991,0.429226048136571,0,0.470284307407084,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,1.17466153824464,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.318593534327405,0,0.155262956876259,0,0,1.04349012362347,0,0,0.406870733204662,1.27294061441792,0,0.464033759878494,0.796191777397232,1.20008329398946,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0.322289439867886,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,2.34640942403454,0.733448665097199,0.406896178315738,0.665756774185513,2.41528552309231,0 | ||
|short_description=p1@ENST00000313495,p1@uc002gnl.1,p1@uc002gnm.1 | |short_description=p1@ENST00000313495,p1@uc002gnl.1,p1@uc002gnm.1 | ||
}} | }} |
Latest revision as of 13:48, 25 July 2015
Short description: | p1@ENST00000313495, p1@uc002gnl.1, p1@uc002gnm.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000313495_5end, CAGE_peak_1_at_uc002gnl.1_5end, CAGE_peak_1_at_uc002gnm.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000313495, uc002gnl.1, uc002gnm.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.63e-08 | 1 |
basal cell carcinoma | 1.88e-08 | 1 |