FFCP PHASE1:Hg19::chr17:10517065..10517082,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:10517065..10517082,+ | |||
|description=CAGE_peak_at_chr17:10517065..10517082,+ | |description=CAGE_peak_at_chr17:10517065..10517082,+ | ||
|id=chr17:10517065..10517082,+ | |id=chr17:10517065..10517082,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.42e-11!15;CL:0000057!6.49e-11!75;CL:0002334!2.09e-09!12;CL:0002620!2.53e-09!23;CL:0002580!1.29e-08!3;CL:0002579!1.94e-08!3;CL:0002570!2.52e-07!8 | |ontology_enrichment_celltype=CL:0000136!1.42e-11!15;CL:0000057!6.49e-11!75;CL:0002334!2.09e-09!12;CL:0002620!2.53e-09!23;CL:0002580!1.29e-08!3;CL:0002579!1.94e-08!3;CL:0002570!2.52e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002580;7.43e-25;3!CL:0002579;3.76e-24;3!CL:0002334;2.08e-23;12!CL:0002617;1.95e-16;2!CL:0002615;1.53e-11;3!CL:0000136;7.83e-10;13!CL:0002570;2.76e-09;8!CL:0002568;3.72e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,7.44e-25,3;CL:0002579,2.86e-24,3;CL:0002334,1.81e-23,12;CL:0000136,2.59e-18,15;CL:0002617,1.48e-16,2;CL:0002615,1.74e-11,3;CL:0002568,3.05e-09,1;CL:0002570,3.27e-09,8;CL:0000057,5.38e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.55e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;7.55e-09;1!DOID:3369;7.55e-09;1!DOID:4235;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,4.91e-09,1;DOID:2513,7.27e-09,1;DOID:4235,8.49e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.11e-10!6;UBERON:0002358!1.11e-10!6;UBERON:0003684!1.11e-10!6;UBERON:0001178!1.11e-10!6;UBERON:0000200!3.94e-08!6;UBERON:0001950!1.29e-07!20;UBERON:0002619!8.66e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.20e-32;6!UBERON:0002358;1.20e-32;6!UBERON:0003684;1.20e-32;6!UBERON:0001178;1.20e-32;6!UBERON:0004457;9.50e-22;9!UBERON:0000042;9.50e-22;9!UBERON:0000310;1.05e-19;10!UBERON:0001443;6.63e-18;11!UBERON:0000989;7.55e-09;1!UBERON:0001282;7.55e-09;1!UBERON:0008811;7.55e-09;1!UBERON:0009842;7.55e-09;1!UBERON:0003704;7.55e-09;1!UBERON:0001171;7.55e-09;1!UBERON:0001172;7.55e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.12e-32,6;UBERON:0002358,1.12e-32,6;UBERON:0003684,1.12e-32,6;UBERON:0001178,1.12e-32,6;UBERON:0000310,9.15e-20,10;UBERON:0001443,5.87e-18,11;UBERON:0004457,2.69e-16,12;UBERON:0000042,2.69e-16,12;UBERON:0000989,5.31e-09,1;UBERON:0008811,5.31e-09,1;UBERON:0006258,5.31e-09,1;UBERON:0005876,5.31e-09,1;UBERON:0004874,5.31e-09,1;UBERON:0001282,1.16e-08,1;UBERON:0009842,1.16e-08,1;UBERON:0003704,1.16e-08,1;UBERON:0001171,1.16e-08,1;UBERON:0001172,1.16e-08,1 | |||
|phase1_expression=1.45342703416445,3.42560838225573,4.22863212287913,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.423863802319124,0,0.103052529238439,2.31876486041066,0.930584281657949,0.506328996723799,1.26668106709558,0.504867548488229,1.19664868234989,0.161646056818812,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.84397774667111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.630809660135739,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,6.20269519546942,4.29693525206575,4.2099014164961,5.25370511948374,3.58195074346692,1.28683136914886,0,0,0.355123450626254,0,0,0,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.677942222341597,0,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0.2506898940227,0.919036730290385,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,1.10961172300523,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0.400027764663154,2.06037423109676,3.36749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0.112131862580613,0,0,2.61260097476354,0.684466602170562,0,0,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.45342703416445,3.42560838225573,4.22863212287913,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.423863802319124,0,0.103052529238439,2.31876486041066,0.930584281657949,0.506328996723799,1.26668106709558,0.504867548488229,1.19664868234989,0.161646056818812,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.84397774667111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.630809660135739,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,6.20269519546942,4.29693525206575,4.2099014164961,5.25370511948374,3.58195074346692,1.28683136914886,0,0,0.355123450626254,0,0,0,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.677942222341597,0,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0.2506898940227,0.919036730290385,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,1.10961172300523,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0.400027764663154,2.06037423109676,3.36749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0.112131862580613,0,0,2.61260097476354,0.684466602170562,0,0,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:10517065..10517082,+ | |short_description=p@chr17:10517065..10517082,+ | ||
}} | }} |
Latest revision as of 13:43, 25 July 2015
Short description: | p@chr17:10517065..10517082, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:10517065..10517082, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 7.44e-25 | 3 |
omentum preadipocyte | 2.86e-24 | 3 |
preadipocyte | 1.81e-23 | 12 |
fat cell | 2.59e-18 | 15 |
adipocyte of breast | 1.48e-16 | 2 |
adipocyte of omentum tissue | 1.74e-11 | 3 |
mesenchymal stem cell of Wharton's jelly | 3.05e-09 | 1 |
mesenchymal stem cell of adipose | 3.27e-09 | 8 |
fibroblast | 5.38e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.12e-32 | 6 |
peritoneum | 1.12e-32 | 6 |
abdominal cavity | 1.12e-32 | 6 |
visceral peritoneum | 1.12e-32 | 6 |
breast | 9.15e-20 | 10 |
chest | 5.87e-18 | 11 |
cavity lining | 2.69e-16 | 12 |
serous membrane | 2.69e-16 | 12 |
penis | 5.31e-09 | 1 |
intromittent organ | 5.31e-09 | 1 |
lateral plate mesenchyme | 5.31e-09 | 1 |
undifferentiated genital tubercle | 5.31e-09 | 1 |
somatopleure | 5.31e-09 | 1 |
intralobular bile duct | 1.16e-08 | 1 |
acinus | 1.16e-08 | 1 |
intrahepatic bile duct | 1.16e-08 | 1 |
portal lobule | 1.16e-08 | 1 |
hepatic acinus | 1.16e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 4.91e-09 | 1 |
basal cell carcinoma | 7.27e-09 | 1 |
spindle cell sarcoma | 8.49e-09 | 1 |