FFCP PHASE1:Hg19::chr17:10195132..10195137,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:10195132..10195137,+ to FFCP PHASE1:Hg19::chr17:10195132..10195137,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:10195132..10195137,+ | |||
|description=CAGE_peak_at_chr17:10195132..10195137,+ | |||
|id=chr17:10195132..10195137,+ | |||
|ontology_enrichment_celltype=CL:0002494!3.98e-20!16;CL:0000192!9.47e-20!42;CL:0000514!9.47e-20!42;CL:0000187!2.50e-19!54;CL:0000359!4.61e-18!32;CL:0000680!8.03e-18!57;CL:0000056!8.03e-18!57;CL:0000355!8.03e-18!57;CL:0000183!6.60e-17!59;CL:0000393!1.79e-16!60;CL:0000211!1.79e-16!60;CL:0002539!5.74e-13!10;CL:0000055!2.18e-12!180;CL:0000569!6.12e-08!4;CL:0000011!6.12e-08!4;CL:0002548!1.44e-07!6;CL:1000306!1.61e-07!4;CL:0002547!1.61e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002494;9.27e-38;16!CL:0000359;2.58e-17;32!CL:0002539;3.81e-15;10!CL:0000569;1.05e-13;4!CL:0002548;2.48e-13;6!CL:1000306;3.84e-13;4!CL:0002547;3.84e-13;4!CL:0000192;1.18e-11;43!CL:0002592;5.67e-11;3!CL:0002580;9.13e-10;3!CL:0000187;5.25e-07;55!CL:0002195;6.38e-07;2!CL:0002571;6.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,6.00e-38,16;CL:0000359,5.58e-17,32;CL:0002539,4.66e-15,10;CL:0000192,8.95e-14,43;CL:0000514,8.95e-14,43;CL:0000569,9.54e-14,4;CL:0000011,9.54e-14,4;CL:0002548,1.96e-13,6;CL:0000187,2.54e-13,55;CL:1000306,6.02e-13,4;CL:0002547,6.02e-13,4;CL:0000680,2.04e-12,58;CL:0000056,2.04e-12,58;CL:0000355,2.04e-12,58;CL:0000393,1.33e-11,61;CL:0000211,1.33e-11,61;CL:0002592,5.31e-11,3;CL:0002580,7.58e-10,3;CL:0000057,4.73e-08,76;CL:0002195,7.46e-07,2;CL:0002571,7.46e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;1.05e-13;4!CL:0000514;1.18e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.72e-21!84;UBERON:0007100!7.62e-21!27;UBERON:0000948!1.13e-19!24;UBERON:0005498!1.13e-19!24;UBERON:0004140!1.13e-19!24;UBERON:0009881!1.13e-19!24;UBERON:0004141!1.13e-19!24;UBERON:0003084!1.13e-19!24;UBERON:0007005!1.13e-19!24;UBERON:0004139!1.13e-19!24;UBERON:0004291!1.13e-19!24;UBERON:0002385!1.12e-17!63;UBERON:0001015!1.12e-17!63;UBERON:0000383!1.12e-17!63;UBERON:0003914!1.54e-17!118;UBERON:0001134!2.79e-17!61;UBERON:0002036!2.79e-17!61;UBERON:0003082!2.79e-17!61;UBERON:0004573!3.05e-16!33;UBERON:0004571!3.05e-16!33;UBERON:0001637!6.64e-16!42;UBERON:0003509!6.64e-16!42;UBERON:0004572!6.64e-16!42;UBERON:0001135!1.00e-15!15;UBERON:0001009!1.44e-15!113;UBERON:0004535!1.80e-14!110;UBERON:0004290!7.12e-14!70;UBERON:0001981!2.49e-13!60;UBERON:0007500!2.49e-13!60;UBERON:0004537!2.49e-13!60;UBERON:0006965!2.49e-13!60;UBERON:0004237!5.74e-13!10;UBERON:0004695!5.74e-13!10;UBERON:0002111!5.74e-13!10;UBERON:0004178!5.74e-13!10;UBERON:0000947!2.91e-11!21;UBERON:0010191!2.91e-11!21;UBERON:0000055!1.43e-10!69;UBERON:0000486!1.45e-10!82;UBERON:0000914!2.45e-10!83;UBERON:0002329!2.45e-10!83;UBERON:0003077!2.45e-10!83;UBERON:0003059!2.45e-10!83;UBERON:0007282!2.45e-10!83;UBERON:0009618!2.45e-10!83;UBERON:0007285!2.45e-10!83;UBERON:0002049!7.10e-10!79;UBERON:0007798!7.10e-10!79;UBERON:0000490!8.17e-10!138;UBERON:0005256!5.57e-09!143;UBERON:0000025!8.88e-08!194;UBERON:0000415!1.61e-07!4;UBERON:0007240!1.61e-07!4;UBERON:0005742!1.61e-07!4;UBERON:0005734!1.61e-07!4;UBERON:0004664!1.61e-07!4;UBERON:0004663!1.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.69e-26;22!UBERON:0007100;6.73e-23;25!UBERON:0004573;2.79e-21;33!UBERON:0004571;2.79e-21;33!UBERON:0001637;7.36e-18;42!UBERON:0003509;7.36e-18;42!UBERON:0004572;7.36e-18;42!UBERON:0000947;2.13e-16;21!UBERON:0010191;2.13e-16;21!UBERON:0004237;3.81e-15;10!UBERON:0004695;3.81e-15;10!UBERON:0002111;3.81e-15;10!UBERON:0004178;3.81e-15;10!UBERON:0004797;3.84e-13;4!UBERON:0000415;3.84e-13;4!UBERON:0007240;3.84e-13;4!UBERON:0005742;3.84e-13;4!UBERON:0005734;3.84e-13;4!UBERON:0004664;3.84e-13;4!UBERON:0004663;3.84e-13;4!UBERON:0003498;5.67e-11;3!UBERON:0005985;5.67e-11;3!UBERON:0001621;5.67e-11;3!UBERON:0001135;9.50e-10;15!UBERON:0007500;1.32e-08;56!UBERON:0001981;1.32e-08;56!UBERON:0004537;1.32e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,7.16e-28,83;UBERON:0000948,8.86e-28,24;UBERON:0005498,8.86e-28,24;UBERON:0004140,8.86e-28,24;UBERON:0009881,8.86e-28,24;UBERON:0004141,8.86e-28,24;UBERON:0003084,8.86e-28,24;UBERON:0007005,8.86e-28,24;UBERON:0004139,8.86e-28,24;UBERON:0004291,8.86e-28,24;UBERON:0003914,8.81e-27,117;UBERON:0004573,2.20e-24,33;UBERON:0004571,2.20e-24,33;UBERON:0007100,2.88e-24,27;UBERON:0001637,2.80e-23,42;UBERON:0003509,2.80e-23,42;UBERON:0004572,2.80e-23,42;UBERON:0004535,2.37e-19,109;UBERON:0001009,1.26e-18,112;UBERON:0000947,3.07e-16,21;UBERON:0010191,3.07e-16,21;UBERON:0007500,3.60e-15,59;UBERON:0001981,3.60e-15,59;UBERON:0004537,3.60e-15,59;UBERON:0006965,3.60e-15,59;UBERON:0004237,4.66e-15,10;UBERON:0004695,4.66e-15,10;UBERON:0002111,4.66e-15,10;UBERON:0004178,4.66e-15,10;UBERON:0000025,1.14e-13,192;UBERON:0000415,6.02e-13,4;UBERON:0007240,6.02e-13,4;UBERON:0005742,6.02e-13,4;UBERON:0005734,6.02e-13,4;UBERON:0004664,6.02e-13,4;UBERON:0004663,6.02e-13,4;UBERON:0000055,1.54e-12,68;UBERON:0001134,2.39e-11,62;UBERON:0002036,2.39e-11,62;UBERON:0003082,2.39e-11,62;UBERON:0003498,4.29e-11,5;UBERON:0005985,4.29e-11,5;UBERON:0001621,5.31e-11,3;UBERON:0002385,7.26e-11,64;UBERON:0001015,7.26e-11,64;UBERON:0000383,7.26e-11,64;UBERON:0002049,2.41e-10,78;UBERON:0007798,2.41e-10,78;UBERON:0004111,5.01e-10,240;UBERON:0001135,1.08e-09,15;UBERON:0002329,2.14e-09,71;UBERON:0003059,2.14e-09,71;UBERON:0007282,2.14e-09,71;UBERON:0004290,2.14e-09,71;UBERON:0009618,2.14e-09,71;UBERON:0005256,3.00e-09,122;UBERON:0003077,3.28e-09,72;UBERON:0007285,3.28e-09,72;UBERON:0007524,4.96e-09,73;UBERON:0003081,2.05e-08,203;UBERON:0007503,3.35e-08,78;UBERON:0000490,1.74e-07,148;UBERON:0003103,1.77e-07,68;UBERON:0000486,1.78e-07,83;UBERON:0004797,2.03e-07,7;UBERON:0001048,3.49e-07,160 | |||
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| ||
|short_description=p@chr17:10195132..10195137,+ | |||
}} | }} |
Latest revision as of 13:39, 25 July 2015
Short description: | p@chr17:10195132..10195137, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:10195132..10195137, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.00e-38 | 16 |
vascular associated smooth muscle cell | 5.58e-17 | 32 |
aortic smooth muscle cell | 4.66e-15 | 10 |
smooth muscle cell | 8.95e-14 | 43 |
smooth muscle myoblast | 8.95e-14 | 43 |
cardiac mesenchymal cell | 9.54e-14 | 4 |
migratory trunk neural crest cell | 9.54e-14 | 4 |
cardiac fibroblast | 1.96e-13 | 6 |
muscle cell | 2.54e-13 | 55 |
fibroblast of tunica adventitia of artery | 6.02e-13 | 4 |
fibroblast of the aortic adventitia | 6.02e-13 | 4 |
muscle precursor cell | 2.04e-12 | 58 |
myoblast | 2.04e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.04e-12 | 58 |
electrically responsive cell | 1.33e-11 | 61 |
electrically active cell | 1.33e-11 | 61 |
smooth muscle cell of the coronary artery | 5.31e-11 | 3 |
preadipocyte of the breast | 7.58e-10 | 3 |
fibroblast | 4.73e-08 | 76 |
hepatic stem cell | 7.46e-07 | 2 |
hepatic mesenchymal stem cell | 7.46e-07 | 2 |