FFCP PHASE1:Hg19::chr16:88770190..88770215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:88770190..88770215,+ | |||
|coexpression_cluster_id=C3601 | |coexpression_cluster_id=C3601 | ||
|description=CAGE_peak_at_chr16:88770190..88770215,+ | |description=CAGE_peak_at_chr16:88770190..88770215,+ | ||
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|ontology_enrichment_celltype=CL:0000037!5.31e-50!172;CL:0000566!5.31e-50!172;CL:0000988!9.53e-46!182;CL:0002032!2.58e-45!165;CL:0000837!2.58e-45!165;CL:0000738!6.46e-45!140;CL:0002087!6.67e-38!119;CL:0002031!2.42e-36!124;CL:0000763!1.05e-28!112;CL:0000049!1.05e-28!112;CL:0000766!1.05e-26!76;CL:0000791!6.51e-25!18;CL:0000789!6.51e-25!18;CL:0002420!6.51e-25!18;CL:0002419!6.51e-25!18;CL:0000790!6.51e-25!18;CL:0000084!5.05e-22!25;CL:0000827!5.05e-22!25;CL:0000557!4.07e-21!71;CL:0002057!1.23e-20!42;CL:0000839!3.31e-20!70;CL:0002009!4.73e-20!65;CL:0002194!1.30e-19!63;CL:0000576!1.30e-19!63;CL:0000040!1.30e-19!63;CL:0000559!1.30e-19!63;CL:0000860!1.16e-18!45;CL:0000625!5.83e-18!11;CL:0000838!4.58e-15!52;CL:0000542!1.27e-14!53;CL:0000051!1.27e-14!53;CL:0000134!8.93e-11!358;CL:0000624!2.15e-10!6;CL:0002320!3.87e-10!365;CL:0002393!3.26e-09!9;CL:0002397!3.26e-09!9;CL:0000219!7.33e-09!390;CL:0000094!1.41e-07!8 | |ontology_enrichment_celltype=CL:0000037!5.31e-50!172;CL:0000566!5.31e-50!172;CL:0000988!9.53e-46!182;CL:0002032!2.58e-45!165;CL:0000837!2.58e-45!165;CL:0000738!6.46e-45!140;CL:0002087!6.67e-38!119;CL:0002031!2.42e-36!124;CL:0000763!1.05e-28!112;CL:0000049!1.05e-28!112;CL:0000766!1.05e-26!76;CL:0000791!6.51e-25!18;CL:0000789!6.51e-25!18;CL:0002420!6.51e-25!18;CL:0002419!6.51e-25!18;CL:0000790!6.51e-25!18;CL:0000084!5.05e-22!25;CL:0000827!5.05e-22!25;CL:0000557!4.07e-21!71;CL:0002057!1.23e-20!42;CL:0000839!3.31e-20!70;CL:0002009!4.73e-20!65;CL:0002194!1.30e-19!63;CL:0000576!1.30e-19!63;CL:0000040!1.30e-19!63;CL:0000559!1.30e-19!63;CL:0000860!1.16e-18!45;CL:0000625!5.83e-18!11;CL:0000838!4.58e-15!52;CL:0000542!1.27e-14!53;CL:0000051!1.27e-14!53;CL:0000134!8.93e-11!358;CL:0000624!2.15e-10!6;CL:0002320!3.87e-10!365;CL:0002393!3.26e-09!9;CL:0002397!3.26e-09!9;CL:0000219!7.33e-09!390;CL:0000094!1.41e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.65e-52;18!CL:0000789;2.65e-52;18!CL:0002419;2.65e-52;18!CL:0000084;1.54e-36;25!CL:0000625;1.95e-34;11!CL:0000624;8.68e-23;6!CL:0000623;2.81e-13;3!CL:0000094;1.70e-12;8!CL:0000898;2.51e-12;3!CL:0000542;4.85e-11;53!CL:0000081;5.42e-09;11!CL:0000815;1.61e-08;2!CL:0000792;1.61e-08;2!CL:0002677;1.61e-08;2 | |ontology_enrichment_celltype_v019=CL:0000791;2.65e-52;18!CL:0000789;2.65e-52;18!CL:0002419;2.65e-52;18!CL:0000084;1.54e-36;25!CL:0000625;1.95e-34;11!CL:0000624;8.68e-23;6!CL:0000623;2.81e-13;3!CL:0000094;1.70e-12;8!CL:0000898;2.51e-12;3!CL:0000542;4.85e-11;53!CL:0000081;5.42e-09;11!CL:0000815;1.61e-08;2!CL:0000792;1.61e-08;2!CL:0002677;1.61e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.37e-52,18;CL:0000789,1.37e-52,18;CL:0002420,1.37e-52,18;CL:0002419,1.37e-52,18;CL:0000790,1.37e-52,18;CL:0000084,9.69e-37,25;CL:0000827,9.69e-37,25;CL:0000625,1.31e-34,11;CL:0000738,3.28e-23,136;CL:0000838,5.67e-23,52;CL:0000624,6.42e-23,6;CL:0000542,1.90e-22,53;CL:0000051,1.90e-22,53;CL:0000037,2.65e-17,168;CL:0002087,2.32e-16,115;CL:0000988,4.99e-16,177;CL:0002032,2.17e-14,161;CL:0000837,2.17e-14,161;CL:0002031,7.09e-14,120;CL:0000623,2.93e-13,3;CL:0000825,2.93e-13,3;CL:0000094,1.70e-12,8;CL:0000898,2.38e-12,3;CL:0000081,5.43e-09,11;CL:0000815,1.35e-08,2;CL:0000792,1.35e-08,2;CL:0002677,1.35e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.65e-52;18!CL:0000051;4.85e-11;53 | |ontology_enrichment_development_v019=CL:0000790;2.65e-52;18!CL:0000051;4.85e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.01e-28!102;UBERON:0003061!4.01e-28!102;UBERON:0002193!3.25e-25!112;UBERON:0002371!1.35e-18!80;UBERON:0001474!1.80e-16!86;UBERON:0002405!4.28e-13!115;UBERON:0004765!2.48e-12!101;UBERON:0001434!2.48e-12!101;UBERON:0000178!1.86e-09!15;UBERON:0000179!1.86e-09!15;UBERON:0000463!1.86e-09!15;UBERON:0002384!2.79e-09!375;UBERON:0003081!1.03e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!4.01e-28!102;UBERON:0003061!4.01e-28!102;UBERON:0002193!3.25e-25!112;UBERON:0002371!1.35e-18!80;UBERON:0001474!1.80e-16!86;UBERON:0002405!4.28e-13!115;UBERON:0004765!2.48e-12!101;UBERON:0001434!2.48e-12!101;UBERON:0000178!1.86e-09!15;UBERON:0000179!1.86e-09!15;UBERON:0000463!1.86e-09!15;UBERON:0002384!2.79e-09!375;UBERON:0003081!1.03e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.42e-12;15!UBERON:0000179;7.42e-12;15!UBERON:0000463;7.42e-12;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.42e-12;15!UBERON:0000179;7.42e-12;15!UBERON:0000463;7.42e-12;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.12e-12,15;UBERON:0000179,6.12e-12,15;UBERON:0000463,6.12e-12,15 | |||
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|short_description=p@chr16:88770190..88770215,+ | |short_description=p@chr16:88770190..88770215,+ | ||
}} | }} |
Latest revision as of 13:21, 25 July 2015
Short description: | p@chr16:88770190..88770215, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:88770190..88770215, + |
Coexpression cluster: | C3601_Eosinophils_CD8_Natural_CD4_Basophils_Neutrophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.37e-52 | 18 |
alpha-beta T cell | 1.37e-52 | 18 |
immature T cell | 1.37e-52 | 18 |
mature T cell | 1.37e-52 | 18 |
immature alpha-beta T cell | 1.37e-52 | 18 |
T cell | 9.69e-37 | 25 |
pro-T cell | 9.69e-37 | 25 |
CD8-positive, alpha-beta T cell | 1.31e-34 | 11 |
leukocyte | 3.28e-23 | 136 |
lymphoid lineage restricted progenitor cell | 5.67e-23 | 52 |
CD4-positive, alpha-beta T cell | 6.42e-23 | 6 |
lymphocyte | 1.90e-22 | 53 |
common lymphoid progenitor | 1.90e-22 | 53 |
hematopoietic stem cell | 2.65e-17 | 168 |
nongranular leukocyte | 2.32e-16 | 115 |
hematopoietic cell | 4.99e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.17e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 7.09e-14 | 120 |
natural killer cell | 2.93e-13 | 3 |
pro-NK cell | 2.93e-13 | 3 |
granulocyte | 1.70e-12 | 8 |
naive T cell | 2.38e-12 | 3 |
blood cell | 5.43e-09 | 11 |
regulatory T cell | 1.35e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.35e-08 | 2 |
naive regulatory T cell | 1.35e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.12e-12 | 15 |
haemolymphatic fluid | 6.12e-12 | 15 |
organism substance | 6.12e-12 | 15 |