FFCP PHASE1:Hg19::chr16:87872416..87872437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87872416..87872437,- | |||
|description=CAGE_peak_at_chr16:87872416..87872437,- | |description=CAGE_peak_at_chr16:87872416..87872437,- | ||
|id=chr16:87872416..87872437,- | |id=chr16:87872416..87872437,- | ||
|ontology_enrichment_celltype=CL:0000066!1.03e-16!254;CL:0002076!7.22e-11!43;CL:0002077!2.13e-08!33;CL:0000223!3.58e-08!59 | |ontology_enrichment_celltype=CL:0000066!1.03e-16!254;CL:0002076!7.22e-11!43;CL:0002077!2.13e-08!33;CL:0000223!3.58e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002077;8.63e-12;34!CL:0002567;3.31e-10;3!CL:0000240;1.13e-08;6!CL:0000311;1.13e-08;6!CL:0000079;1.13e-08;6!CL:0000237;1.13e-08;6!CL:0002076;6.55e-08;42!CL:0000148;8.10e-08;10!CL:0002159;1.23e-07;14!CL:0000575;1.69e-07;2!CL:0000710;8.59e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.05e-14,253;CL:0002077,4.27e-13,34;CL:0002567,1.04e-10,3;CL:0002076,5.73e-10,42;CL:0000240,1.03e-08,6;CL:0000311,1.03e-08,6;CL:0000079,1.03e-08,6;CL:0000237,1.03e-08,6;CL:0000036,1.03e-08,6;CL:0000357,1.03e-08,6;CL:0000114,1.03e-08,6;CL:0000148,3.66e-08,10;CL:0000541,3.66e-08,10;CL:0002159,9.18e-08,14;CL:0000575,2.52e-07,2;CL:0000221,3.61e-07,72;CL:0000710,5.56e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;1.13e-08;6!CL:0000114;1.13e-08;6 | |||
|ontology_enrichment_disease=DOID:305!7.13e-11!106;DOID:0050687!1.11e-09!143;DOID:162!7.48e-07!235 | |ontology_enrichment_disease=DOID:305!7.13e-11!106;DOID:0050687!1.11e-09!143;DOID:162!7.48e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.00e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.06e-08!9 | |ontology_enrichment_uberon=UBERON:0001737!9.06e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.64e-20;9!UBERON:0001557;1.64e-20;9!UBERON:0001003;2.87e-09;15!UBERON:0007376;2.87e-09;15!UBERON:0003343;4.03e-08;4!UBERON:0004785;4.03e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.31e-21,9;UBERON:0001557,2.17e-11,19;UBERON:0001003,1.79e-09,15;UBERON:0007376,1.79e-09,15;UBERON:0007383,1.79e-09,15;UBERON:0003343,6.80e-08,4;UBERON:0004785,6.80e-08,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0.152826811495903,0,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.6024118375565,1.10926203050036,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0.863077176966451,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0.545812300115692,0.449446968890169,1.22433556948361,0.320929027076094,1.91801137739712,0,0.199463657621632,0,2.90209238628584,1.13477044938228,0.622822248995575,1.25624332628372,1.0429658368404,0.434377689410233,1.21079900526674,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.724232594804119,0.795285947051099,1.45990461090791,0,0,0.527008714158756,0.130979075497713,1.09288586487763,2.96627554227544,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,2.18047026071267,0.496971951695318,0.25326102332916,0,0.860509862246441,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.500474079487857,0,0.438977620880838,0,0,0.340296549480063,0.179389635688862,0.85422955527427,0,0.600182192168805,0.515262646192195,0,0.37223371266318,0,0.389748020644795,0,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0,0.193260853163297,0.545492241181669,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0.504641701751257,0,0,1.28648187638577,0,0,0,1.77460200059766,1.34867752062481,1.20505514941741,1.65440959098591,1.30727666455444,0.71181185733329,1.07865046528132,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,0.122988438543114,0,1.31700342490351,4.49607013030478,1.3068766413512,1.20364978706088,0.325808305310325,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.141775097242386,0.895585227028483,0.871901815541886,0.383382679165211,0.492663237895943,0,0,0,0,0.698476837213859,1.90994212779139,2.34434894420094,1.71072446022705,1.7480673759565,2.70308752059526,0.857479297891735,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0.813795071099207,0.415941723061614,1.24900292158013,0.630809660135739,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.907170879989041,0,0,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0,0,0,0.483437798366489,3.20810352485256,4.60404944679482,0.114814448164607,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0.438519753291869,0.522870902049801,0,0.328014645699706,0.650756789328606,0,0.0915694648183434,0.082509499920588,0,1.95018073810956,0,0.48335359146061,0,0,0,0.107420244868274,0.290033387828457,0.170453254832202,0.445160178233687,1.81813406897076,2.11409074101617,0.382838137483752,1.11273558941105,0.464845549297286,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.848432591722276,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0.196498082026242,0,0.354761064070598,0.844430541190656,0.329294892959902,0.379473173765715,1.04980416073495,0.384888450902048,0,0,0.0941438007767792,0.86101074534246,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0.245040215981032,0.185803175125719,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0.313359791546046,0,0,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0,0,0.390776190804081,0.278406173895242,1.23087398947712,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0,0,0,0.140669416410513,0.111308705022906,0.659215496907038,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,1.79021174675609,0,0,0,0,0,0.0927680981618513,1.99613798001194,1.30213880542617,0,0,0.910347586283997,0.254253650292766,0.472775363535873,0,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0,0.435753854075961,0.557694977114413,0,0.113942055847001,0.23056390438806,0.448788222048861,0.217294743844016,0.31900115973192,0.366390373607449,1.06606955203727,0,0.31396051279005,0,0,0.392125068635479,0.167821586975843,0,0,2.74297483886435,0,0.141353071433941,0.432777279484182,0,0,0,0,0.247127877893006,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0.391329237864179,0.242780379534093,0,0,0.61214552326098,0,0,0,0,0.330991955875499,0.6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| ||
|short_description=p@chr16:87872416..87872437,- | |short_description=p@chr16:87872416..87872437,- | ||
}} | }} |
Latest revision as of 13:13, 25 July 2015
Short description: | p@chr16:87872416..87872437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87872416..87872437, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.05e-14 | 253 |
ecto-epithelial cell | 4.27e-13 | 34 |
light melanocyte | 1.04e-10 | 3 |
endo-epithelial cell | 5.73e-10 | 42 |
stratified squamous epithelial cell | 1.03e-08 | 6 |
keratin accumulating cell | 1.03e-08 | 6 |
stratified epithelial cell | 1.03e-08 | 6 |
keratinizing barrier epithelial cell | 1.03e-08 | 6 |
epithelial fate stem cell | 1.03e-08 | 6 |
stratified epithelial stem cell | 1.03e-08 | 6 |
surface ectodermal cell | 1.03e-08 | 6 |
melanocyte | 3.66e-08 | 10 |
melanoblast | 3.66e-08 | 10 |
general ecto-epithelial cell | 9.18e-08 | 14 |
corneal epithelial cell | 2.52e-07 | 2 |
ectodermal cell | 3.61e-07 | 72 |
neurecto-epithelial cell | 5.56e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.31e-21 | 9 |
upper respiratory tract | 2.17e-11 | 19 |
skin epidermis | 1.79e-09 | 15 |
outer epithelium | 1.79e-09 | 15 |
enveloping layer of ectoderm | 1.79e-09 | 15 |
mucosa of oral region | 6.80e-08 | 4 |
respiratory system mucosa | 6.80e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.00e-07 | 2 |