FFCP PHASE1:Hg19::chr16:87498643..87498677,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87498643..87498677,+ | |||
|coexpression_cluster_id=C569 | |||
|description=CAGE_peak_at_chr16:87498643..87498677,+ | |description=CAGE_peak_at_chr16:87498643..87498677,+ | ||
|id=chr16:87498643..87498677,+ | |id=chr16:87498643..87498677,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.52e-58!42;CL:0000860!6.35e-54!45;CL:0000766!1.74e-42!76;CL:0000557!3.93e-41!71;CL:0002009!2.54e-38!65;CL:0000839!6.94e-37!70;CL:0002194!8.98e-35!63;CL:0000576!8.98e-35!63;CL:0000040!8.98e-35!63;CL:0000559!8.98e-35!63;CL:0000763!1.09e-34!112;CL:0000049!1.09e-34!112;CL:0000738!1.42e-29!140;CL:0000037!4.37e-26!172;CL:0000566!4.37e-26!172;CL:0002032!6.19e-24!165;CL:0000837!6.19e-24!165;CL:0002031!6.43e-24!124;CL:0000988!7.57e-24!182;CL:0002087!2.78e-22!119;CL:0000134!1.93e-20!358;CL:0000219!2.40e-20!390;CL:0002320!1.09e-19!365;CL:0000048!6.97e-14!430;CL:0000034!1.43e-13!444;CL:0000723!1.95e-13!436;CL:0002393!1.03e-09!9;CL:0002397!1.03e-09!9;CL:0000063!3.11e-09!578;CL:0002371!4.21e-09!591;CL:0000767!1.86e-08!3;CL:0000144!4.22e-08!625;CL:0000842!1.58e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.52e-58!42;CL:0000860!6.35e-54!45;CL:0000766!1.74e-42!76;CL:0000557!3.93e-41!71;CL:0002009!2.54e-38!65;CL:0000839!6.94e-37!70;CL:0002194!8.98e-35!63;CL:0000576!8.98e-35!63;CL:0000040!8.98e-35!63;CL:0000559!8.98e-35!63;CL:0000763!1.09e-34!112;CL:0000049!1.09e-34!112;CL:0000738!1.42e-29!140;CL:0000037!4.37e-26!172;CL:0000566!4.37e-26!172;CL:0002032!6.19e-24!165;CL:0000837!6.19e-24!165;CL:0002031!6.43e-24!124;CL:0000988!7.57e-24!182;CL:0002087!2.78e-22!119;CL:0000134!1.93e-20!358;CL:0000219!2.40e-20!390;CL:0002320!1.09e-19!365;CL:0000048!6.97e-14!430;CL:0000034!1.43e-13!444;CL:0000723!1.95e-13!436;CL:0002393!1.03e-09!9;CL:0002397!1.03e-09!9;CL:0000063!3.11e-09!578;CL:0002371!4.21e-09!591;CL:0000767!1.86e-08!3;CL:0000144!4.22e-08!625;CL:0000842!1.58e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.59e-31;33!CL:0002057;6.59e-31;33!CL:0000576;2.51e-26;48!CL:0002393;7.43e-26;6!CL:0002397;7.43e-26;6!CL:0000473;3.05e-24;39!CL:0000234;3.05e-24;39!CL:0000766;4.21e-20;69!CL:0000767;1.41e-13;3!CL:0000094;3.59e-11;8!CL:0000763;6.74e-09;100!CL:0000081;2.89e-08;11!CL:0002087;3.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-48,42;CL:0002057,1.96e-48,42;CL:0000766,4.12e-44,72;CL:0000473,4.18e-42,48;CL:0000234,4.18e-42,48;CL:0000557,8.18e-38,67;CL:0002009,8.32e-37,61;CL:0000839,9.41e-34,66;CL:0002194,3.10e-33,59;CL:0000576,3.10e-33,59;CL:0000040,3.10e-33,59;CL:0000559,3.10e-33,59;CL:0000763,4.22e-32,108;CL:0000049,4.22e-32,108;CL:0000738,5.56e-25,136;CL:0002032,1.07e-20,161;CL:0000837,1.07e-20,161;CL:0002031,3.91e-20,120;CL:0000037,1.01e-19,168;CL:0000988,1.40e-18,177;CL:0002393,2.71e-17,9;CL:0002397,2.71e-17,9;CL:0002087,4.62e-16,115;CL:0000767,1.02e-13,3;CL:0000094,2.86e-11,8;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000081,2.45e-08,11;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-36;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.87e-44!86;UBERON:0002371!1.23e-39!80;UBERON:0004765!1.10e-35!101;UBERON:0001434!1.10e-35!101;UBERON:0002390!2.01e-35!102;UBERON:0003061!2.01e-35!102;UBERON:0002193!4.03e-31!112;UBERON:0002405!1.02e-26!115;UBERON:0002384!1.16e-18!375;UBERON:0002204!1.19e-16!167;UBERON:0003081!8.88e-16!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.20e-33,76;UBERON:0001474,1.58e-30,82;UBERON:0004765,1.27e-27,90;UBERON:0002405,1.17e-26,93;UBERON:0002390,3.49e-25,98;UBERON:0003061,3.49e-25,98;UBERON:0001434,1.24e-24,100;UBERON:0002193,1.23e-22,108;UBERON:0002204,9.31e-14,167;UBERON:0003081,2.24e-12,203;UBERON:0002384,2.34e-08,371;UBERON:0000926,5.86e-07,315;UBERON:0004120,5.86e-07,315;UBERON:0006603,5.86e-07,315 | |||
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|short_description=p@chr16:87498643..87498677,+ | |short_description=p@chr16:87498643..87498677,+ | ||
}} | }} |
Latest revision as of 13:11, 25 July 2015
Short description: | p@chr16:87498643..87498677, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87498643..87498677, + |
Coexpression cluster: | C569_CD14_immature_CD19_Basophils_migratory_Dendritic_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.96e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-48 | 42 |
myeloid leukocyte | 4.12e-44 | 72 |
defensive cell | 4.18e-42 | 48 |
phagocyte | 4.18e-42 | 48 |
granulocyte monocyte progenitor cell | 8.18e-38 | 67 |
macrophage dendritic cell progenitor | 8.32e-37 | 61 |
myeloid lineage restricted progenitor cell | 9.41e-34 | 66 |
monopoietic cell | 3.10e-33 | 59 |
monocyte | 3.10e-33 | 59 |
monoblast | 3.10e-33 | 59 |
promonocyte | 3.10e-33 | 59 |
myeloid cell | 4.22e-32 | 108 |
common myeloid progenitor | 4.22e-32 | 108 |
leukocyte | 5.56e-25 | 136 |
hematopoietic oligopotent progenitor cell | 1.07e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 3.91e-20 | 120 |
hematopoietic stem cell | 1.01e-19 | 168 |
hematopoietic cell | 1.40e-18 | 177 |
intermediate monocyte | 2.71e-17 | 9 |
CD14-positive, CD16-positive monocyte | 2.71e-17 | 9 |
nongranular leukocyte | 4.62e-16 | 115 |
basophil | 1.02e-13 | 3 |
granulocyte | 2.86e-11 | 8 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
blood cell | 2.45e-08 | 11 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.20e-33 | 76 |
bone element | 1.58e-30 | 82 |
skeletal element | 1.27e-27 | 90 |
immune system | 1.17e-26 | 93 |
hematopoietic system | 3.49e-25 | 98 |
blood island | 3.49e-25 | 98 |
skeletal system | 1.24e-24 | 100 |
hemolymphoid system | 1.23e-22 | 108 |
musculoskeletal system | 9.31e-14 | 167 |
lateral plate mesoderm | 2.24e-12 | 203 |
connective tissue | 2.34e-08 | 371 |
mesoderm | 5.86e-07 | 315 |
mesoderm-derived structure | 5.86e-07 | 315 |
presumptive mesoderm | 5.86e-07 | 315 |