FFCP PHASE1:Hg19::chr16:85589349..85589370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85589349..85589370,+ | |||
|coexpression_cluster_id=C3595 | |||
|description=CAGE_peak_at_chr16:85589349..85589370,+ | |description=CAGE_peak_at_chr16:85589349..85589370,+ | ||
|id=chr16:85589349..85589370,+ | |id=chr16:85589349..85589370,+ | ||
|ontology_enrichment_celltype=CL:0000763!8.20e-20!112;CL:0000049!8.20e-20!112;CL:0000766!1.10e-16!76;CL:0000037!2.94e-15!172;CL:0000566!2.94e-15!172;CL:0002032!8.19e-15!165;CL:0000837!8.19e-15!165;CL:0000988!1.84e-14!182;CL:0002057!2.50e-14!42;CL:0000860!3.76e-14!45;CL:0000839!1.62e-13!70;CL:0000557!5.61e-13!71;CL:0002194!2.32e-10!63;CL:0000576!2.32e-10!63;CL:0000040!2.32e-10!63;CL:0000559!2.32e-10!63;CL:0000738!5.34e-10!140;CL:0002009!5.92e-10!65;CL:0002031!1.07e-08!124;CL:0002087!2.99e-07!119 | |ontology_enrichment_celltype=CL:0000763!8.20e-20!112;CL:0000049!8.20e-20!112;CL:0000766!1.10e-16!76;CL:0000037!2.94e-15!172;CL:0000566!2.94e-15!172;CL:0002032!8.19e-15!165;CL:0000837!8.19e-15!165;CL:0000988!1.84e-14!182;CL:0002057!2.50e-14!42;CL:0000860!3.76e-14!45;CL:0000839!1.62e-13!70;CL:0000557!5.61e-13!71;CL:0002194!2.32e-10!63;CL:0000576!2.32e-10!63;CL:0000040!2.32e-10!63;CL:0000559!2.32e-10!63;CL:0000738!5.34e-10!140;CL:0002009!5.92e-10!65;CL:0002031!1.07e-08!124;CL:0002087!2.99e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-13;33!CL:0002057;4.46e-13;33!CL:0000576;6.47e-09;48!CL:0000766;1.30e-08;69!CL:0000473;3.14e-08;39!CL:0000234;3.14e-08;39!CL:0000763;4.24e-07;100!CL:0000094;4.72e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.13e-21,108;CL:0000049,4.13e-21,108;CL:0000766,7.53e-18,72;CL:0000037,4.20e-15,168;CL:0000988,8.86e-15,177;CL:0002032,1.41e-14,161;CL:0000837,1.41e-14,161;CL:0000860,2.32e-14,42;CL:0002057,2.32e-14,42;CL:0000839,7.25e-14,66;CL:0000557,6.49e-13,67;CL:0000473,4.61e-11,48;CL:0000234,4.61e-11,48;CL:0002194,5.67e-10,59;CL:0000576,5.67e-10,59;CL:0000040,5.67e-10,59;CL:0000559,5.67e-10,59;CL:0000738,1.11e-09,136;CL:0002009,2.94e-09,61;CL:0002031,8.09e-08,120;CL:0000094,3.11e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.99e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.83e-16!102;UBERON:0003061!1.83e-16!102;UBERON:0002193!1.68e-14!112;UBERON:0002405!1.47e-11!115;UBERON:0002371!2.55e-11!80;UBERON:0001474!5.74e-11!86;UBERON:0007023!8.53e-09!115;UBERON:0004765!3.92e-07!101;UBERON:0001434!3.92e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-07;15!UBERON:0000179;1.27e-07;15!UBERON:0000463;1.27e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.55e-16,98;UBERON:0003061,3.55e-16,98;UBERON:0002193,9.01e-13,108;UBERON:0002371,5.36e-11,76;UBERON:0001474,4.49e-10,82;UBERON:0004765,2.67e-08,90;UBERON:0002405,5.50e-08,93;UBERON:0000178,6.66e-08,15;UBERON:0000179,6.66e-08,15;UBERON:0000463,6.66e-08,15 | |||
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| ||
|short_description=p@chr16:85589349..85589370,+ | |short_description=p@chr16:85589349..85589370,+ | ||
}} | }} |
Latest revision as of 13:00, 25 July 2015
Short description: | p@chr16:85589349..85589370, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85589349..85589370, + |
Coexpression cluster: | C3595_acute_Mast_parietal_chronic_placenta_choriocarcinoma_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.13e-21 | 108 |
common myeloid progenitor | 4.13e-21 | 108 |
myeloid leukocyte | 7.53e-18 | 72 |
hematopoietic stem cell | 4.20e-15 | 168 |
hematopoietic cell | 8.86e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.41e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-14 | 161 |
classical monocyte | 2.32e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-14 | 42 |
myeloid lineage restricted progenitor cell | 7.25e-14 | 66 |
granulocyte monocyte progenitor cell | 6.49e-13 | 67 |
defensive cell | 4.61e-11 | 48 |
phagocyte | 4.61e-11 | 48 |
monopoietic cell | 5.67e-10 | 59 |
monocyte | 5.67e-10 | 59 |
monoblast | 5.67e-10 | 59 |
promonocyte | 5.67e-10 | 59 |
leukocyte | 1.11e-09 | 136 |
macrophage dendritic cell progenitor | 2.94e-09 | 61 |
hematopoietic lineage restricted progenitor cell | 8.09e-08 | 120 |
granulocyte | 3.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.55e-16 | 98 |
blood island | 3.55e-16 | 98 |
hemolymphoid system | 9.01e-13 | 108 |
bone marrow | 5.36e-11 | 76 |
bone element | 4.49e-10 | 82 |
skeletal element | 2.67e-08 | 90 |
immune system | 5.50e-08 | 93 |
blood | 6.66e-08 | 15 |
haemolymphatic fluid | 6.66e-08 | 15 |
organism substance | 6.66e-08 | 15 |