FFCP PHASE1:Hg19::chr16:778493..778540,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:778493..778540,+ to FFCP PHASE1:Hg19::chr16:778493..778540,+: NSchange) |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:778493..778540,+ | |||
|description=CAGE_peak_at_chr16:778493..778540,+ | |||
|id=chr16:778493..778540,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.70e-11!248;CL:0000220!1.13e-10!246;CL:0000055!3.06e-09!180;CL:0000066!4.67e-07!254;CL:0000393!7.38e-07!60;CL:0000211!7.38e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:1000507;7.18e-09;10!CL:1000494;7.18e-09;10!CL:1000449;9.45e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.10e-08,10;CL:1000494,1.10e-08,10;CL:0002321,4.29e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.78e-13!309;UBERON:0000119!5.93e-13!312;UBERON:0000475!1.16e-11!365;UBERON:0002100!4.03e-08!216;UBERON:0000481!8.79e-08!347;UBERON:0000064!4.11e-07!219;UBERON:0000486!5.49e-07!82;UBERON:0000914!8.06e-07!83;UBERON:0002329!8.06e-07!83;UBERON:0003077!8.06e-07!83;UBERON:0003059!8.06e-07!83;UBERON:0007282!8.06e-07!83;UBERON:0009618!8.06e-07!83;UBERON:0007285!8.06e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.18e-09;10!UBERON:0009773;7.18e-09;10!UBERON:0001231;7.18e-09;10!UBERON:0004810;7.18e-09;10!UBERON:0006555;9.45e-07;15!UBERON:0004819;9.45e-07;15!UBERON:0001285;9.45e-07;15!UBERON:0007684;9.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,5.43e-12,306;UBERON:0000119,1.72e-11,309;UBERON:0004810,1.10e-08,10;UBERON:0002100,8.87e-08,199;UBERON:0007503,1.09e-07,78;UBERON:0003104,3.33e-07,160;UBERON:0009142,3.33e-07,160;UBERON:0002329,3.58e-07,71;UBERON:0003059,3.58e-07,71;UBERON:0007282,3.58e-07,71;UBERON:0004290,3.58e-07,71;UBERON:0009618,3.58e-07,71;UBERON:0007524,4.26e-07,73;UBERON:0000486,4.35e-07,83;UBERON:0003077,6.61e-07,72;UBERON:0007285,6.61e-07,72 | |||
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|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,0,2.7030733015166,4.18680700783456,3.49506195408276,5.53910654279752,1.23766352960047,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0.492484232307152,2.24400760368678,2.19418305034661,1.14494394852423,3.42186062682211,3.13856598987007,1.29902789771517,1.64201178899891,1.57421562627358,0.393364276848904,0,0,8.27479102031034,3.31326510656075,1.47901604066715,0,8.38798471675787,2.05520307534393,0,0.401088894940283,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0,0.790152254325231,0,0,0.205601498999509,0.334372990781356,0,1.4203434172042,0,0,1.17842362989935,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0.651083453856419,0.950452044448374,0.150575119077773,0.255973222308837,1.24930726552346,0.473554504088034,0,0.403213486449465,0,0,2.43806866313962,0,0.511450247374121,0,0,1.01392563272577,0,0,0.661743720148475,0.886917589850256,0.527008714158756,0.458426764241994,5.82872461268068,2.59549109949101,0.324547393654683,0.870648686496336,0,0.238490624305342,0,0,0.198762407366705,1.72046919021225,0.347140501607594,0,1.67799774483962,1.10047216776027,0.626984899610432,0.516833518338658,0.35576626268671,0,0.805658634218294,3.04108842287405,0.976248230192678,0.367663080345869,4.0507097394088,0.535798369704479,0.44905874525234,0.900891843866578,1.53316637465883,1.89853131913626,0.549605231791222,0,0,3.05265836499774,0,0.25326102332916,1.72131935057184,0.573673241497627,0.709336764396714,2.24271040056923,0,0.98667019366864,0.311211035399766,0.538842688278752,0.653847612453835,0.151357427644931,0,2.10889288650417,7.17968176709737,5.70471821544449,2.69007624993242,3.75790395660048,2.5899671098901,1.40450806702248,1.42907919878425,3.4393608847295,0.929932030581889,0,0,0.910161361938026,4.31170885089743,1.68336113954066,1.12606667884768,0.554128230968366,0.877955241761676,0.30648779579902,0.150238058906597,0.907457465280168,0.358779271377724,0,0.847727604638247,1.20036438433761,0.515262646192195,0,0.558350568994769,1.5189869901714,0.584622030967192,0.757301322732344,0.368199594569197,0,0,0.503760491138201,1.3564847384839,0.773043412653187,1.36373060295417,1.43402297694502,8.53815942907168,4.10842281796604,6.27447291495399,6.73796857599908,4.03713361401005,3.6497735907583,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,6.49691533502627,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,2.4694440679884,7.3504355692771,0,0,0,0,0.614942192715568,0.171567810298526,0.329250856225877,2.24803506515239,0.402115889646523,1.75918045801206,1.62904152655162,8.31947828223663,2.88662684050547,0.695582429850461,0.469634776943287,0.433099343283221,0,0.761016608938393,5.53143078571493,3.43394464837949,0.492434012174795,0,0.148631162288728,1.87467667973554,0.671928512795438,0.425325291727159,0.447792613514241,0.290633938513962,0,0,0,0.207328115540772,1.00883967391873,0.88369703398466,0.698476837213859,1.14596527667483,0,3.4214489204541,1.85089486865982,4.20480280981484,0.857479297891735,0,0.43596006883328,0.07333828582095,1.55126058909333,14.3062578340753,0.845302752556,1.06375246633948,1.04007436911366,4.62973273671856,15.6034045225606,4.79559922228979,0.714889968290738,1.08524321078289,9.05564370458846,1.62868092146868,0.710783897485092,21.3827005692026,1.20575750823834,1.74306691720059,0.699810938274399,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,1.44781306667579,2.05476322550383,0.716243852959582,1.12085143993527,0,0.431255149719035,1.02674429023799,0,0,0.773288812777695,1.50764638800914,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,1.62759014219841,0,1.07057393278297,0.788512075169673,0.35142424497814,0,0,4.1389228517002,0.664225598535437,1.65932251687533,0.781952530212746,3.32861967686659,0,0,0,0.213455115606889,0,0,3.0239029332968,0,0.61384789315225,1.12264037773229,0.768834895534206,0,0.321707842287215,1.48418066444991,0.771048469013278,0.177561725313127,1.31403449622095,1.03850885836724,1.16210378459959,1.0877350463246,1.00253235151642,0.368323955743585,0.574072240823034,0.546273504020151,0.655622074797121,5.41439535488894,2.00239876471478,18.8243944602445,5.84556898613043,4.01096189792928,0,0.850468526382578,1.0795795805107,0,4.6060894382455,5.01689773854853,4.33289664176565,7.47968408035852,10.5221134719424,0,0,8.97575437907362,5.24823433119529,2.27764876265012,0,0.824125183365091,0.990113999047056,0,0.650060246036521,1.6068392984416,0,4.92955574766862,2.6095624703442,3.44591431211326,1.6113036730241,2.75531718437034,2.98293195956353,0.08903203564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| ||
|short_description=p@chr16:778493..778540,+ | |||
}} | }} |
Latest revision as of 12:32, 25 July 2015
Short description: | p@chr16:778493..778540, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:778493..778540, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.10e-08 | 10 |
nephron tubule epithelial cell | 1.10e-08 | 10 |
embryonic cell | 4.29e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelium | 5.43e-12 | 306 |
cell layer | 1.72e-11 | 309 |
nephron tubule epithelium | 1.10e-08 | 10 |
trunk | 8.87e-08 | 199 |
epithelial vesicle | 1.09e-07 | 78 |
mesenchyme | 3.33e-07 | 160 |
entire embryonic mesenchyme | 3.33e-07 | 160 |
somite | 3.58e-07 | 71 |
presomitic mesoderm | 3.58e-07 | 71 |
presumptive segmental plate | 3.58e-07 | 71 |
dermomyotome | 3.58e-07 | 71 |
trunk paraxial mesoderm | 3.58e-07 | 71 |
dense mesenchyme tissue | 4.26e-07 | 73 |
multilaminar epithelium | 4.35e-07 | 83 |
paraxial mesoderm | 6.61e-07 | 72 |
presumptive paraxial mesoderm | 6.61e-07 | 72 |