FFCP PHASE1:Hg19::chr16:778493..778540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:778493..778540,+ | |||
|description=CAGE_peak_at_chr16:778493..778540,+ | |description=CAGE_peak_at_chr16:778493..778540,+ | ||
|id=chr16:778493..778540,+ | |id=chr16:778493..778540,+ | ||
|ontology_enrichment_celltype=CL:0002321!2.70e-11!248;CL:0000220!1.13e-10!246;CL:0000055!3.06e-09!180;CL:0000066!4.67e-07!254;CL:0000393!7.38e-07!60;CL:0000211!7.38e-07!60 | |ontology_enrichment_celltype=CL:0002321!2.70e-11!248;CL:0000220!1.13e-10!246;CL:0000055!3.06e-09!180;CL:0000066!4.67e-07!254;CL:0000393!7.38e-07!60;CL:0000211!7.38e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.18e-09;10!CL:1000494;7.18e-09;10!CL:1000449;9.45e-07;15 | |ontology_enrichment_celltype_v019=CL:1000507;7.18e-09;10!CL:1000494;7.18e-09;10!CL:1000449;9.45e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.10e-08,10;CL:1000494,1.10e-08,10;CL:0002321,4.29e-08,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.78e-13!309;UBERON:0000119!5.93e-13!312;UBERON:0000475!1.16e-11!365;UBERON:0002100!4.03e-08!216;UBERON:0000481!8.79e-08!347;UBERON:0000064!4.11e-07!219;UBERON:0000486!5.49e-07!82;UBERON:0000914!8.06e-07!83;UBERON:0002329!8.06e-07!83;UBERON:0003077!8.06e-07!83;UBERON:0003059!8.06e-07!83;UBERON:0007282!8.06e-07!83;UBERON:0009618!8.06e-07!83;UBERON:0007285!8.06e-07!83 | |ontology_enrichment_uberon=UBERON:0000483!1.78e-13!309;UBERON:0000119!5.93e-13!312;UBERON:0000475!1.16e-11!365;UBERON:0002100!4.03e-08!216;UBERON:0000481!8.79e-08!347;UBERON:0000064!4.11e-07!219;UBERON:0000486!5.49e-07!82;UBERON:0000914!8.06e-07!83;UBERON:0002329!8.06e-07!83;UBERON:0003077!8.06e-07!83;UBERON:0003059!8.06e-07!83;UBERON:0007282!8.06e-07!83;UBERON:0009618!8.06e-07!83;UBERON:0007285!8.06e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.18e-09;10!UBERON:0009773;7.18e-09;10!UBERON:0001231;7.18e-09;10!UBERON:0004810;7.18e-09;10!UBERON:0006555;9.45e-07;15!UBERON:0004819;9.45e-07;15!UBERON:0001285;9.45e-07;15!UBERON:0007684;9.45e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;7.18e-09;10!UBERON:0009773;7.18e-09;10!UBERON:0001231;7.18e-09;10!UBERON:0004810;7.18e-09;10!UBERON:0006555;9.45e-07;15!UBERON:0004819;9.45e-07;15!UBERON:0001285;9.45e-07;15!UBERON:0007684;9.45e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,5.43e-12,306;UBERON:0000119,1.72e-11,309;UBERON:0004810,1.10e-08,10;UBERON:0002100,8.87e-08,199;UBERON:0007503,1.09e-07,78;UBERON:0003104,3.33e-07,160;UBERON:0009142,3.33e-07,160;UBERON:0002329,3.58e-07,71;UBERON:0003059,3.58e-07,71;UBERON:0007282,3.58e-07,71;UBERON:0004290,3.58e-07,71;UBERON:0009618,3.58e-07,71;UBERON:0007524,4.26e-07,73;UBERON:0000486,4.35e-07,83;UBERON:0003077,6.61e-07,72;UBERON:0007285,6.61e-07,72 | |||
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| ||
|short_description=p@chr16:778493..778540,+ | |short_description=p@chr16:778493..778540,+ | ||
}} | }} |
Latest revision as of 12:32, 25 July 2015
Short description: | p@chr16:778493..778540, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:778493..778540, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.10e-08 | 10 |
nephron tubule epithelial cell | 1.10e-08 | 10 |
embryonic cell | 4.29e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelium | 5.43e-12 | 306 |
cell layer | 1.72e-11 | 309 |
nephron tubule epithelium | 1.10e-08 | 10 |
trunk | 8.87e-08 | 199 |
epithelial vesicle | 1.09e-07 | 78 |
mesenchyme | 3.33e-07 | 160 |
entire embryonic mesenchyme | 3.33e-07 | 160 |
somite | 3.58e-07 | 71 |
presomitic mesoderm | 3.58e-07 | 71 |
presumptive segmental plate | 3.58e-07 | 71 |
dermomyotome | 3.58e-07 | 71 |
trunk paraxial mesoderm | 3.58e-07 | 71 |
dense mesenchyme tissue | 4.26e-07 | 73 |
multilaminar epithelium | 4.35e-07 | 83 |
paraxial mesoderm | 6.61e-07 | 72 |
presumptive paraxial mesoderm | 6.61e-07 | 72 |