FFCP PHASE1:Hg19::chr16:735529..735579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:735529..735579,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr16:735529..735579,+ | |description=CAGE_peak_at_chr16:735529..735579,+ | ||
|id=chr16:735529..735579,+ | |id=chr16:735529..735579,+ | ||
|ontology_enrichment_celltype=CL:0002178!7.42e-09!3;CL:0000167!9.91e-08!1;CL:0000164!9.91e-08!1;CL:0000502!9.91e-08!1;CL:0000172!9.91e-08!1;CL:0000173!9.91e-08!1;CL:0002351!9.91e-08!1;CL:0000819!4.08e-07!1;CL:0002574!6.97e-07!1 | |ontology_enrichment_celltype=CL:0002178!7.42e-09!3;CL:0000167!9.91e-08!1;CL:0000164!9.91e-08!1;CL:0000502!9.91e-08!1;CL:0000172!9.91e-08!1;CL:0000173!9.91e-08!1;CL:0002351!9.91e-08!1;CL:0000819!4.08e-07!1;CL:0002574!6.97e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.88e-50;1!CL:0000164;1.88e-50;1!CL:0000502;1.88e-50;1!CL:0000172;1.88e-50;1!CL:0000173;1.88e-50;1!CL:0000322;1.12e-17;3!CL:0000082;1.91e-11;19!CL:0000150;7.69e-07;9!CL:0000163;7.69e-07;9!CL:0002202;8.85e-07;9!CL:0002632;8.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.46e-50,1;CL:0000164,1.46e-50,1;CL:0000502,1.46e-50,1;CL:0000172,1.46e-50,1;CL:0000173,1.46e-50,1;CL:0002351,1.46e-50,1;CL:0000322,1.12e-17,3;CL:0000082,1.91e-11,19;CL:0000150,7.48e-07,9;CL:0000163,7.48e-07,9;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;1.88e-50;1!UBERON:0008947;7.40e-08;29!UBERON:0001041;1.25e-07;30 | |||
|ontology_enrichment_disease=DOID:4430!9.91e-08!1;DOID:3119!3.91e-07!14;DOID:0060073!4.08e-07!1;DOID:8675!4.08e-07!1 | |ontology_enrichment_disease=DOID:4430!9.91e-08!1;DOID:3119!3.91e-07!14;DOID:0060073!4.08e-07!1;DOID:8675!4.08e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.88e-50;1!DOID:1325;4.86e-29;7!DOID:3904;4.86e-29;7!DOID:3910;9.18e-26;2!DOID:3905;7.17e-23;9!DOID:1324;3.36e-14;15!DOID:5409;1.13e-13;4!DOID:0050615;2.21e-13;16!DOID:3908;3.60e-11;5!DOID:169;1.27e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.46e-50,1;DOID:1325,4.86e-29,7;DOID:3904,4.86e-29,7;DOID:3910,9.18e-26,2;DOID:3905,7.17e-23,9;DOID:1324,3.36e-14,15;DOID:5409,1.13e-13,4;DOID:0050615,2.21e-13,16;DOID:3908,3.60e-11,5;DOID:169,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000989!1.74e-07!1;UBERON:0008811!1.74e-07!1;UBERON:0006258!1.74e-07!1;UBERON:0005876!1.74e-07!1;UBERON:0004874!1.74e-07!1;UBERON:0007029!1.85e-07!1;UBERON:0000998!1.97e-07!1;UBERON:0006868!1.97e-07!1;UBERON:0002146!2.84e-07!1;UBERON:0005623!2.84e-07!1;UBERON:0001874!4.60e-07!1 | |ontology_enrichment_uberon=UBERON:0000989!1.74e-07!1;UBERON:0008811!1.74e-07!1;UBERON:0006258!1.74e-07!1;UBERON:0005876!1.74e-07!1;UBERON:0004874!1.74e-07!1;UBERON:0007029!1.85e-07!1;UBERON:0000998!1.97e-07!1;UBERON:0006868!1.97e-07!1;UBERON:0002146!2.84e-07!1;UBERON:0005623!2.84e-07!1;UBERON:0001874!4.60e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.18e-26;2!UBERON:0002173;9.18e-26;2!UBERON:0002186;9.18e-26;2!UBERON:0004821;1.12e-17;3!UBERON:0007499;1.12e-17;3!UBERON:0003215;1.12e-17;3!UBERON:0010368;1.12e-17;3!UBERON:0009911;1.12e-17;3!UBERON:0002299;1.12e-17;3!UBERON:0006524;1.12e-17;3!UBERON:0008874;1.12e-17;3!UBERON:0002169;1.12e-17;3!UBERON:0004894;1.12e-17;3!UBERON:0009856;1.29e-13;4!UBERON:0004802;1.91e-11;19!UBERON:0000115;1.91e-11;19!UBERON:0002048;4.96e-10;22!UBERON:0004807;4.96e-10;22!UBERON:0000117;4.96e-10;22!UBERON:0000171;4.96e-10;22!UBERON:0000170;4.96e-10;22!UBERON:0005911;3.80e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0004802,1.91e-11,19;UBERON:0000115,1.91e-11,19;UBERON:0002048,4.96e-10,22;UBERON:0000117,4.96e-10,22;UBERON:0000171,4.96e-10,22;UBERON:0000170,4.96e-10,22;UBERON:0005597,4.96e-10,22;UBERON:0000118,4.96e-10,22;UBERON:0004807,4.21e-08,28;UBERON:0005178,7.59e-07,34;UBERON:0002224,7.59e-07,34 | |||
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|short_description=p@chr16:735529..735579,+ | |short_description=p@chr16:735529..735579,+ | ||
}} | }} |
Latest revision as of 12:16, 25 July 2015
Short description: | p@chr16:735529..735579, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:735529..735579, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.46e-50 | 1 |
enteroendocrine cell | 1.46e-50 | 1 |
type D enteroendocrine cell | 1.46e-50 | 1 |
somatostatin secreting cell | 1.46e-50 | 1 |
pancreatic D cell | 1.46e-50 | 1 |
progenitor cell of endocrine pancreas | 1.46e-50 | 1 |
pneumocyte | 1.12e-17 | 3 |
epithelial cell of lung | 1.91e-11 | 19 |
glandular epithelial cell | 7.48e-07 | 9 |
endocrine cell | 7.48e-07 | 9 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
pulmonary alveolus epithelium | 1.12e-17 | 3 |
alveolus | 1.12e-17 | 3 |
pulmonary lobule | 1.12e-17 | 3 |
lobule | 1.12e-17 | 3 |
alveolus of lung | 1.12e-17 | 3 |
alveolar system | 1.12e-17 | 3 |
pulmonary acinus | 1.12e-17 | 3 |
alveolar sac | 1.12e-17 | 3 |
alveolar wall | 1.12e-17 | 3 |
respiratory tract epithelium | 1.91e-11 | 19 |
lung epithelium | 1.91e-11 | 19 |
lung | 4.96e-10 | 22 |
respiratory tube | 4.96e-10 | 22 |
respiration organ | 4.96e-10 | 22 |
pair of lungs | 4.96e-10 | 22 |
lung primordium | 4.96e-10 | 22 |
lung bud | 4.96e-10 | 22 |
respiratory system epithelium | 4.21e-08 | 28 |
thoracic cavity element | 7.59e-07 | 34 |
thoracic cavity | 7.59e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.46e-50 | 1 |
bronchus cancer | 4.86e-29 | 7 |
bronchogenic carcinoma | 4.86e-29 | 7 |
lung adenocarcinoma | 9.18e-26 | 2 |
lung carcinoma | 7.17e-23 | 9 |
lung cancer | 3.36e-14 | 15 |
lung small cell carcinoma | 1.13e-13 | 4 |
respiratory system cancer | 2.21e-13 | 16 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
neuroendocrine tumor | 1.22e-09 | 6 |