FFCP PHASE1:Hg19::chr16:7353919..7353933,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:7353919..7353933,+ | |||
|description=CAGE_peak_at_chr16:7353919..7353933,+ | |description=CAGE_peak_at_chr16:7353919..7353933,+ | ||
|id=chr16:7353919..7353933,+ | |id=chr16:7353919..7353933,+ | ||
|ontology_enrichment_celltype=CL:0000242!4.65e-09!2 | |ontology_enrichment_celltype=CL:0000242!4.65e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.01e-34;2!CL:0000242;2.01e-34;2!CL:0000312;2.04e-14;5!CL:0000240;3.54e-12;6!CL:0000311;3.54e-12;6!CL:0000079;3.54e-12;6!CL:0000237;3.54e-12;6!CL:0000362;2.01e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-34,2;CL:0000312,1.84e-14,5;CL:0000240,3.26e-12,6;CL:0000311,3.26e-12,6;CL:0000079,3.26e-12,6;CL:0000237,3.26e-12,6;CL:0000036,3.26e-12,6;CL:0000357,3.26e-12,6;CL:0000114,3.26e-12,6;CL:0000362,1.90e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;3.54e-12;6!CL:0000114;3.54e-12;6!UBERON:0006241;9.64e-07;3!UBERON:0003057;9.64e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;1.53e-10;7!DOID:3904;1.53e-10;7!DOID:154;9.07e-10;2!DOID:4236;9.07e-10;2!DOID:3905;2.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,9.51e-18,4;DOID:1325,1.46e-10,7;DOID:3904,1.46e-10,7;DOID:154,9.46e-10,2;DOID:4236,9.46e-10,2;DOID:3905,2.05e-08,9;DOID:0050687,7.27e-07,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001954;1.17e-09;2!UBERON:0003022;1.17e-09;2!UBERON:0002421;1.17e-09;2!UBERON:0002600;1.17e-09;2!UBERON:0002240;9.64e-07;3!UBERON:0005174;9.64e-07;3!UBERON:0001137;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.33e-09,2;UBERON:0003022,1.33e-09,2;UBERON:0002421,1.33e-09,2;UBERON:0002600,1.33e-09,2;UBERON:0002240,9.12e-07,3;UBERON:0005174,9.12e-07,3;UBERON:0001137,9.12e-07,3 | |||
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| ||
|short_description=p@chr16:7353919..7353933,+ | |short_description=p@chr16:7353919..7353933,+ | ||
}} | }} |
Latest revision as of 12:16, 25 July 2015
Short description: | p@chr16:7353919..7353933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:7353919..7353933, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.56e-34 | 2 |
keratinocyte | 1.84e-14 | 5 |
stratified squamous epithelial cell | 3.26e-12 | 6 |
keratin accumulating cell | 3.26e-12 | 6 |
stratified epithelial cell | 3.26e-12 | 6 |
keratinizing barrier epithelial cell | 3.26e-12 | 6 |
epithelial fate stem cell | 3.26e-12 | 6 |
stratified epithelial stem cell | 3.26e-12 | 6 |
surface ectodermal cell | 3.26e-12 | 6 |
epidermal cell | 1.90e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.33e-09 | 2 |
lobe parts of cerebral cortex | 1.33e-09 | 2 |
hippocampal formation | 1.33e-09 | 2 |
limbic lobe | 1.33e-09 | 2 |
spinal cord | 9.12e-07 | 3 |
dorsal region element | 9.12e-07 | 3 |
dorsum | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 9.51e-18 | 4 |
bronchus cancer | 1.46e-10 | 7 |
bronchogenic carcinoma | 1.46e-10 | 7 |
mixed cell type cancer | 9.46e-10 | 2 |
carcinosarcoma | 9.46e-10 | 2 |
lung carcinoma | 2.05e-08 | 9 |
cell type cancer | 7.27e-07 | 143 |