FFCP PHASE1:Hg19::chr16:67514971..67514977,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_CU679153_5end | |association_with_transcript=12bp_to_CU679153_5end | ||
|cluster_id=chr16:67514971..67514977,- | |||
|description=CAGE_peak_1_at_CU679153_5end | |description=CAGE_peak_1_at_CU679153_5end | ||
|id=chr16:67514971..67514977,- | |id=chr16:67514971..67514977,- | ||
|ontology_enrichment_celltype=CL:0000766!5.79e-15!76;CL:0000557!8.16e-15!71;CL:0000839!2.60e-14!70;CL:0002009!3.18e-13!65;CL:0002194!3.69e-13!63;CL:0000576!3.69e-13!63;CL:0000040!3.69e-13!63;CL:0000559!3.69e-13!63;CL:0002057!4.91e-12!42;CL:0000860!3.73e-11!45;CL:0000763!4.92e-08!112;CL:0000049!4.92e-08!112;CL:0002371!7.64e-08!591;CL:0000144!4.51e-07!625 | |ontology_enrichment_celltype=CL:0000766!5.79e-15!76;CL:0000557!8.16e-15!71;CL:0000839!2.60e-14!70;CL:0002009!3.18e-13!65;CL:0002194!3.69e-13!63;CL:0000576!3.69e-13!63;CL:0000040!3.69e-13!63;CL:0000559!3.69e-13!63;CL:0002057!4.91e-12!42;CL:0000860!3.73e-11!45;CL:0000763!4.92e-08!112;CL:0000049!4.92e-08!112;CL:0002371!7.64e-08!591;CL:0000144!4.51e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.81e-13;3!CL:0000097;1.02e-08;5!CL:0000473;2.08e-08;39!CL:0000234;2.08e-08;39!CL:0000860;8.63e-08;33!CL:0002057;8.63e-08;33!CL:0002231;8.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.35e-13,3;CL:0000766,8.07e-13,72;CL:0000839,2.33e-09,66;CL:0000557,3.54e-09,67;CL:0000097,9.48e-09,5;CL:0002028,9.48e-09,5;CL:0000473,2.15e-08,48;CL:0000234,2.15e-08,48;CL:0000763,2.39e-07,108;CL:0000049,2.39e-07,108;CL:0002231,9.74e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.15e-14;3!DOID:127;7.15e-14;3!DOID:0060072;1.62e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.67e-14,3;DOID:127,4.67e-14,3;DOID:0060072,1.18e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.01e-12!167;UBERON:0004765!1.99e-11!101;UBERON:0001434!1.99e-11!101;UBERON:0002371!2.32e-11!80;UBERON:0000926!1.62e-10!448;UBERON:0004120!1.62e-10!448;UBERON:0006603!1.62e-10!448;UBERON:0001474!1.87e-10!86;UBERON:0003081!1.09e-09!216;UBERON:0002405!7.30e-09!115;UBERON:0002390!3.97e-08!102;UBERON:0003061!3.97e-08!102;UBERON:0002193!1.04e-07!112 | |ontology_enrichment_uberon=UBERON:0002204!4.01e-12!167;UBERON:0004765!1.99e-11!101;UBERON:0001434!1.99e-11!101;UBERON:0002371!2.32e-11!80;UBERON:0000926!1.62e-10!448;UBERON:0004120!1.62e-10!448;UBERON:0006603!1.62e-10!448;UBERON:0001474!1.87e-10!86;UBERON:0003081!1.09e-09!216;UBERON:0002405!7.30e-09!115;UBERON:0002390!3.97e-08!102;UBERON:0003061!3.97e-08!102;UBERON:0002193!1.04e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;3.51e-09;2!UBERON:0003688;6.05e-07;6!UBERON:0002358;6.05e-07;6!UBERON:0003684;6.05e-07;6!UBERON:0001178;6.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.22e-09,2;UBERON:0000926,7.80e-08,315;UBERON:0004120,7.80e-08,315;UBERON:0006603,7.80e-08,315;UBERON:0002371,9.24e-08,76;UBERON:0001474,5.42e-07,82;UBERON:0003688,9.32e-07,6;UBERON:0002358,9.32e-07,6;UBERON:0003684,9.32e-07,6;UBERON:0001178,9.32e-07,6 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.704772020479856,0,4.02264984984559,1.74467704820074,0,0,2.35067065379855,0,0,0,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0,0.572471974262113,0.273748850145768,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0.257575567634187,2.4717700592526,0.755751887377619,0.727752183563449,1.62700325833979,0.411167888021826,0.309706370895104,1.7261543539329,0.256160706529101,0.236482229888585,0,0.645484683583826,0,1.50593871634084,1.09162460023138,0.449446968890169,1.53041946185451,0.962787081228281,1.27867425159808,3.29851300186716,0.199463657621632,1.70489900213078,0.870627715885752,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0.664789802594326,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0.805658634218294,0,0.488124115096339,0,1.62028389576352,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0.633152558322899,0.132409180813219,0.860509862246441,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0,0,1.58040879591855,0,0.492434012174795,0.702012795417713,1.0404181360211,0,0.503946384596579,0.141775097242386,0,0,0,0,0.264145302039678,3.10992173311158,2.73827911492227,3.53478813593864,0,0.381988425558278,2.34434894420094,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,0,1.49959486773086,0,0.502257091432126,4.21667878966063,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,1.80567659836631,4.5481500811197,0,0,0,0.434418072340414,0.195801157462741,0.343143423810856,0,0.862856803274467,0.213455115606889,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0.561320188866147,0.768834895534206,1.02341449813341,1.28683136914886,1.48418066444991,0,0.532685175939381,0,0,0,1.45031339509947,6.21570057940183,0.184161977871793,0.114814448164607,0.546273504020151,3.40923478894503,0,0,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0.495854746082934,0.576570202095319,0,0.30347334256665,1.85938219718914,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.429374660225974,0.372158369359667,0,0.190630193923825,0.255897791311334,0.42793898803392,0.636406495851874,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.844430541190656,0.658589785919804,0,0,0.0962221127255121,0,2.17781969722645,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0.520679215005393,0,0,0.52418000472609,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0,0.19980960958213,0.288180834308212,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0.13480708770837,0,0,0,0,0.321506296930038,0,0,0.449947783103001,0,0.0607495566580247,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0,6.51599522104455,1.72844298240254,2.28611152076586,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0.704815022316672,0.106787412567695,0,0.828478110694391,0.992332043623902,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0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| ||
|short_description=p1@CU679153 | |short_description=p1@CU679153 | ||
}} | }} |
Latest revision as of 11:26, 25 July 2015
Short description: | p1@CU679153 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU679153_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_CU679153_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.35e-13 | 3 |
myeloid leukocyte | 8.07e-13 | 72 |
myeloid lineage restricted progenitor cell | 2.33e-09 | 66 |
granulocyte monocyte progenitor cell | 3.54e-09 | 67 |
mast cell | 9.48e-09 | 5 |
basophil mast progenitor cell | 9.48e-09 | 5 |
defensive cell | 2.15e-08 | 48 |
phagocyte | 2.15e-08 | 48 |
myeloid cell | 2.39e-07 | 108 |
common myeloid progenitor | 2.39e-07 | 108 |
epithelial cell of prostate | 9.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.22e-09 | 2 |
mesoderm | 7.80e-08 | 315 |
mesoderm-derived structure | 7.80e-08 | 315 |
presumptive mesoderm | 7.80e-08 | 315 |
bone marrow | 9.24e-08 | 76 |
bone element | 5.42e-07 | 82 |
omentum | 9.32e-07 | 6 |
peritoneum | 9.32e-07 | 6 |
abdominal cavity | 9.32e-07 | 6 |
visceral peritoneum | 9.32e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.67e-14 | 3 |
leiomyoma | 4.67e-14 | 3 |
benign neoplasm | 1.18e-10 | 4 |