FFCP PHASE1:Hg19::chr16:65159972..65159987,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:65159972..65159987,- | |||
|coexpression_cluster_id=C2382 | |||
|description=CAGE_peak_at_chr16:65159972..65159987,- | |description=CAGE_peak_at_chr16:65159972..65159987,- | ||
|id=chr16:65159972..65159987,- | |id=chr16:65159972..65159987,- | ||
|ontology_enrichment_celltype=CL:0000077!2.14e-07!19 | |ontology_enrichment_celltype=CL:0000077!2.14e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002549;7.69e-21;2!CL:0002568;4.80e-11;1!CL:0000077;2.91e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,7.70e-21,2;CL:0002568,4.15e-11,1;CL:0000077,3.14e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.80e-11;1 | |||
|ontology_enrichment_disease=DOID:2394!6.03e-16!14;DOID:120!3.50e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.01e-16;14!DOID:171;4.96e-09;10!DOID:120;1.28e-08;27!DOID:193;5.14e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.06e-16,14;DOID:171,4.90e-09,10;DOID:120,1.31e-08,27;DOID:193,5.26e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000992!5.10e-11!13;UBERON:0002118!1.87e-08!5;UBERON:0004532!1.87e-08!5;UBERON:0005284!2.39e-08!5 | |ontology_enrichment_uberon=UBERON:0000992!5.10e-11!13;UBERON:0002118!1.87e-08!5;UBERON:0004532!1.87e-08!5;UBERON:0005284!2.39e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;7.69e-21;2!UBERON:0005358;7.69e-21;2!UBERON:0001886;7.69e-21;2!UBERON:0004086;7.69e-21;2!UBERON:0005282;7.69e-21;2!UBERON:0005281;7.69e-21;2!UBERON:0002363;4.80e-11;1!UBERON:0001282;4.80e-11;1!UBERON:0009842;4.80e-11;1!UBERON:0003704;4.80e-11;1!UBERON:0001171;4.80e-11;1!UBERON:0001172;4.80e-11;1!UBERON:0002346;3.29e-10;4!UBERON:0000923;3.29e-10;4!UBERON:0010316;3.29e-10;4!UBERON:0005291;3.29e-10;4!UBERON:0005284;6.87e-09;5!UBERON:0002118;1.63e-08;5!UBERON:0002050;2.42e-08;5!UBERON:0005423;2.42e-08;5!UBERON:0000992;4.66e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,7.70e-21,2;UBERON:0005358,7.70e-21,2;UBERON:0001886,7.70e-21,2;UBERON:0004086,7.70e-21,2;UBERON:0005282,7.70e-21,2;UBERON:0005281,7.70e-21,2;UBERON:0002363,4.58e-11,1;UBERON:0007645,4.58e-11,1;UBERON:0007647,4.58e-11,1;UBERON:0010115,4.58e-11,1;UBERON:0001282,5.57e-11,1;UBERON:0009842,5.57e-11,1;UBERON:0003704,5.57e-11,1;UBERON:0001171,5.57e-11,1;UBERON:0001172,5.57e-11,1;UBERON:0005284,6.87e-09,5;UBERON:0002118,1.72e-08,5;UBERON:0000992,4.61e-07,13 | |||
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| ||
|short_description=p@chr16:65159972..65159987,- | |short_description=p@chr16:65159972..65159987,- | ||
}} | }} |
Latest revision as of 10:59, 25 July 2015
Short description: | p@chr16:65159972..65159987, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:65159972..65159987, - |
Coexpression cluster: | C2382_large_Fibroblast_Mesothelial_Mesenchymal_mesothelioma_mesenchymal_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 7.70e-21 | 2 |
mesenchymal stem cell of Wharton's jelly | 4.15e-11 | 1 |
mesothelial cell | 3.14e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 7.70e-21 | 2 |
ventricle of nervous system | 7.70e-21 | 2 |
choroid plexus | 7.70e-21 | 2 |
brain ventricle | 7.70e-21 | 2 |
ventricular system of brain | 7.70e-21 | 2 |
ventricular system of central nervous system | 7.70e-21 | 2 |
dura mater | 4.58e-11 | 1 |
future meninx | 4.58e-11 | 1 |
ectomeninx | 4.58e-11 | 1 |
future dura mater | 4.58e-11 | 1 |
intralobular bile duct | 5.57e-11 | 1 |
acinus | 5.57e-11 | 1 |
intrahepatic bile duct | 5.57e-11 | 1 |
portal lobule | 5.57e-11 | 1 |
hepatic acinus | 5.57e-11 | 1 |
brain vasculature | 6.87e-09 | 5 |
right ovary | 1.72e-08 | 5 |
female gonad | 4.61e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.06e-16 | 14 |
neuroectodermal tumor | 4.90e-09 | 10 |
female reproductive organ cancer | 1.31e-08 | 27 |
reproductive organ cancer | 5.26e-08 | 29 |