FFCP PHASE1:Hg19::chr16:55536741..55536782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55536741..55536782,+ | |||
|coexpression_cluster_id=C351 | |coexpression_cluster_id=C351 | ||
|description=CAGE_peak_at_chr16:55536741..55536782,+ | |description=CAGE_peak_at_chr16:55536741..55536782,+ | ||
|id=chr16:55536741..55536782,+ | |id=chr16:55536741..55536782,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.14e-34!180;CL:0000680!1.33e-15!57;CL:0000056!1.33e-15!57;CL:0000355!1.33e-15!57;CL:0000057!9.79e-15!75;CL:0000187!3.47e-14!54;CL:0000183!1.48e-13!59;CL:0000393!4.38e-13!60;CL:0000211!4.38e-13!60;CL:0000192!8.70e-13!42;CL:0000514!8.70e-13!42;CL:0000222!4.77e-10!119;CL:0000359!6.69e-09!32;CL:0002371!1.82e-08!591;CL:0002539!2.68e-08!10;CL:0000048!9.33e-08!430;CL:0000723!1.23e-07!436;CL:0000034!1.54e-07!444;CL:0002494!4.30e-07!16;CL:0000144!5.61e-07!625 | |ontology_enrichment_celltype=CL:0000055!1.14e-34!180;CL:0000680!1.33e-15!57;CL:0000056!1.33e-15!57;CL:0000355!1.33e-15!57;CL:0000057!9.79e-15!75;CL:0000187!3.47e-14!54;CL:0000183!1.48e-13!59;CL:0000393!4.38e-13!60;CL:0000211!4.38e-13!60;CL:0000192!8.70e-13!42;CL:0000514!8.70e-13!42;CL:0000222!4.77e-10!119;CL:0000359!6.69e-09!32;CL:0002371!1.82e-08!591;CL:0002539!2.68e-08!10;CL:0000048!9.33e-08!430;CL:0000723!1.23e-07!436;CL:0000034!1.54e-07!444;CL:0002494!4.30e-07!16;CL:0000144!5.61e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002539;4.69e-12;10!CL:0000134;6.12e-10;55!CL:0000723;1.66e-09;61!CL:0000048;1.73e-09;58!CL:0000499;1.67e-08;28!CL:0000359;4.23e-08;32!CL:0000192;6.44e-08;43!CL:0002334;3.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.22e-17,427;CL:0000723,4.35e-16,433;CL:0000034,3.70e-15,441;CL:0000057,1.58e-12,76;CL:0002539,2.47e-12,10;CL:0000680,1.18e-10,58;CL:0000056,1.18e-10,58;CL:0000355,1.18e-10,58;CL:0000192,2.49e-10,43;CL:0000514,2.49e-10,43;CL:0002320,4.53e-10,361;CL:0000187,1.08e-09,55;CL:0000134,5.24e-09,354;CL:0000499,1.63e-08,28;CL:0000359,3.04e-08,32;CL:0000393,5.44e-08,61;CL:0000211,5.44e-08,61;CL:0000136,1.06e-07,15;CL:0002334,3.94e-07,12;CL:0000219,6.50e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;6.44e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!4.49e-08!14 | |ontology_enrichment_disease=DOID:2394!4.49e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.89e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.21e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.27e-16!84;UBERON:0000914!9.65e-16!83;UBERON:0002329!9.65e-16!83;UBERON:0003077!9.65e-16!83;UBERON:0003059!9.65e-16!83;UBERON:0007282!9.65e-16!83;UBERON:0009618!9.65e-16!83;UBERON:0007285!9.65e-16!83;UBERON:0002385!2.36e-14!63;UBERON:0001015!2.36e-14!63;UBERON:0000383!2.36e-14!63;UBERON:0001134!3.34e-14!61;UBERON:0002036!3.34e-14!61;UBERON:0003082!3.34e-14!61;UBERON:0004290!3.78e-14!70;UBERON:0001637!4.66e-13!42;UBERON:0003509!4.66e-13!42;UBERON:0004572!4.66e-13!42;UBERON:0001981!6.31e-13!60;UBERON:0007500!6.31e-13!60;UBERON:0004537!6.31e-13!60;UBERON:0006965!6.31e-13!60;UBERON:0005256!1.37e-12!143;UBERON:0000486!3.74e-12!82;UBERON:0002049!8.21e-12!79;UBERON:0007798!8.21e-12!79;UBERON:0004573!2.57e-11!33;UBERON:0004571!2.57e-11!33;UBERON:0000947!3.14e-11!21;UBERON:0010191!3.14e-11!21;UBERON:0000490!3.75e-11!138;UBERON:0000055!9.94e-11!69;UBERON:0001009!1.14e-10!113;UBERON:0004535!1.35e-10!110;UBERON:0003914!4.76e-10!118;UBERON:0001135!2.06e-09!15;UBERON:0002100!7.04e-09!216;UBERON:0004237!2.68e-08!10;UBERON:0004695!2.68e-08!10;UBERON:0002111!2.68e-08!10;UBERON:0004178!2.68e-08!10;UBERON:0002199!1.41e-07!45;UBERON:0002416!1.41e-07!45;UBERON:0003102!6.53e-07!95;UBERON:0000475!7.02e-07!365 | |ontology_enrichment_uberon=UBERON:0004872!1.27e-16!84;UBERON:0000914!9.65e-16!83;UBERON:0002329!9.65e-16!83;UBERON:0003077!9.65e-16!83;UBERON:0003059!9.65e-16!83;UBERON:0007282!9.65e-16!83;UBERON:0009618!9.65e-16!83;UBERON:0007285!9.65e-16!83;UBERON:0002385!2.36e-14!63;UBERON:0001015!2.36e-14!63;UBERON:0000383!2.36e-14!63;UBERON:0001134!3.34e-14!61;UBERON:0002036!3.34e-14!61;UBERON:0003082!3.34e-14!61;UBERON:0004290!3.78e-14!70;UBERON:0001637!4.66e-13!42;UBERON:0003509!4.66e-13!42;UBERON:0004572!4.66e-13!42;UBERON:0001981!6.31e-13!60;UBERON:0007500!6.31e-13!60;UBERON:0004537!6.31e-13!60;UBERON:0006965!6.31e-13!60;UBERON:0005256!1.37e-12!143;UBERON:0000486!3.74e-12!82;UBERON:0002049!8.21e-12!79;UBERON:0007798!8.21e-12!79;UBERON:0004573!2.57e-11!33;UBERON:0004571!2.57e-11!33;UBERON:0000947!3.14e-11!21;UBERON:0010191!3.14e-11!21;UBERON:0000490!3.75e-11!138;UBERON:0000055!9.94e-11!69;UBERON:0001009!1.14e-10!113;UBERON:0004535!1.35e-10!110;UBERON:0003914!4.76e-10!118;UBERON:0001135!2.06e-09!15;UBERON:0002100!7.04e-09!216;UBERON:0004237!2.68e-08!10;UBERON:0004695!2.68e-08!10;UBERON:0002111!2.68e-08!10;UBERON:0004178!2.68e-08!10;UBERON:0002199!1.41e-07!45;UBERON:0002416!1.41e-07!45;UBERON:0003102!6.53e-07!95;UBERON:0000475!7.02e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;2.10e-12;21!UBERON:0010191;2.10e-12;21!UBERON:0004573;4.21e-12;33!UBERON:0004571;4.21e-12;33!UBERON:0004237;4.69e-12;10!UBERON:0004695;4.69e-12;10!UBERON:0002111;4.69e-12;10!UBERON:0004178;4.69e-12;10!UBERON:0001135;2.16e-10;15!UBERON:0001637;1.43e-09;42!UBERON:0003509;1.43e-09;42!UBERON:0004572;1.43e-09;42!UBERON:0001013;2.66e-09;14!UBERON:0002384;8.06e-08;198!UBERON:0002385;1.82e-07;31!UBERON:0001015;1.82e-07;31!UBERON:0000383;1.82e-07;31!UBERON:0002072;4.75e-07;5 | |||
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| ||
|short_description=p@chr16:55536741..55536782,+ | |short_description=p@chr16:55536741..55536782,+ | ||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55536741..55536782, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55536741..55536782, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.22e-17 | 427 |
somatic stem cell | 4.35e-16 | 433 |
stem cell | 3.70e-15 | 441 |
fibroblast | 1.58e-12 | 76 |
aortic smooth muscle cell | 2.47e-12 | 10 |
muscle precursor cell | 1.18e-10 | 58 |
myoblast | 1.18e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.18e-10 | 58 |
smooth muscle cell | 2.49e-10 | 43 |
smooth muscle myoblast | 2.49e-10 | 43 |
connective tissue cell | 4.53e-10 | 361 |
muscle cell | 1.08e-09 | 55 |
mesenchymal cell | 5.24e-09 | 354 |
stromal cell | 1.63e-08 | 28 |
vascular associated smooth muscle cell | 3.04e-08 | 32 |
electrically responsive cell | 5.44e-08 | 61 |
electrically active cell | 5.44e-08 | 61 |
fat cell | 1.06e-07 | 15 |
preadipocyte | 3.94e-07 | 12 |
motile cell | 6.50e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.21e-12 | 14 |