FFCP PHASE1:Hg19::chr16:55523576..55523615,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:55523576..55523615,+
|short_description=p@chr16:55523576..55523615,+
|description=CAGE_peak_at_chr16:55523576..55523615,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:55523576..55523615,+ | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_at_chr16:55523576..55523615,+ | |||
|id=chr16:55523576..55523615,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.25e-35!180;CL:0000057!1.37e-18!75;CL:0000680!5.66e-14!57;CL:0000056!5.66e-14!57;CL:0000355!5.66e-14!57;CL:0000183!2.38e-13!59;CL:0000187!1.33e-12!54;CL:0000192!1.52e-11!42;CL:0000514!1.52e-11!42;CL:0000393!3.90e-11!60;CL:0000211!3.90e-11!60;CL:0002371!6.29e-09!591;CL:0002334!7.21e-09!12;CL:0000359!5.04e-08!32;CL:0000048!5.49e-08!430;CL:0000723!1.08e-07!436;CL:0000034!1.70e-07!444;CL:0000222!2.88e-07!119;CL:0000144!6.97e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.66e-12;12!CL:0000134;1.98e-07;55!CL:0000359;3.27e-07;32!CL:0000723;5.68e-07;61!CL:0002320;6.44e-07;188!CL:0000057;7.82e-07;73!CL:0002494;9.70e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.63e-18,76;CL:0000048,5.33e-16,427;CL:0000723,2.47e-15,433;CL:0000034,5.44e-15,441;CL:0002334,4.19e-12,12;CL:0002320,4.44e-10,361;CL:0000134,2.00e-09,354;CL:0000680,1.87e-08,58;CL:0000056,1.87e-08,58;CL:0000355,1.87e-08,58;CL:0000136,2.81e-08,15;CL:0000219,8.42e-08,386;CL:0000187,1.68e-07,55;CL:0000192,2.29e-07,43;CL:0000514,2.29e-07,43;CL:0000359,4.28e-07,32;CL:0002494,8.96e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.56e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.71e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.50e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.62e-15!84;UBERON:0000914!9.13e-15!83;UBERON:0002329!9.13e-15!83;UBERON:0003077!9.13e-15!83;UBERON:0003059!9.13e-15!83;UBERON:0007282!9.13e-15!83;UBERON:0009618!9.13e-15!83;UBERON:0007285!9.13e-15!83;UBERON:0002385!8.14e-14!63;UBERON:0001015!8.14e-14!63;UBERON:0000383!8.14e-14!63;UBERON:0004290!9.75e-14!70;UBERON:0001134!1.72e-13!61;UBERON:0002036!1.72e-13!61;UBERON:0003082!1.72e-13!61;UBERON:0000486!1.19e-12!82;UBERON:0001981!3.06e-12!60;UBERON:0007500!3.06e-12!60;UBERON:0004537!3.06e-12!60;UBERON:0006965!3.06e-12!60;UBERON:0001637!2.77e-11!42;UBERON:0003509!2.77e-11!42;UBERON:0004572!2.77e-11!42;UBERON:0002049!8.12e-11!79;UBERON:0007798!8.12e-11!79;UBERON:0001009!1.16e-10!113;UBERON:0004535!1.46e-10!110;UBERON:0000055!1.80e-10!69;UBERON:0000490!3.82e-10!138;UBERON:0002199!1.27e-09!45;UBERON:0002416!1.27e-09!45;UBERON:0003914!1.47e-09!118;UBERON:0005256!3.00e-09!143;UBERON:0003102!2.62e-08!95;UBERON:0004573!2.94e-08!33;UBERON:0004571!2.94e-08!33;UBERON:0002097!7.87e-08!40;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0000947!1.29e-07!21;UBERON:0010191!1.29e-07!21;UBERON:0007100!1.69e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.36e-10;9!UBERON:0000042;3.36e-10;9!UBERON:0003688;7.65e-09;6!UBERON:0002358;7.65e-09;6!UBERON:0003684;7.65e-09;6!UBERON:0001178;7.65e-09;6!UBERON:0004573;2.02e-08;33!UBERON:0004571;2.02e-08;33!UBERON:0002384;8.45e-08;198!UBERON:0001637;1.41e-07;42!UBERON:0003509;1.41e-07;42!UBERON:0004572;1.41e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.63e-10,42;UBERON:0003509,2.63e-10,42;UBERON:0004572,2.63e-10,42;UBERON:0004872,3.87e-10,83;UBERON:0002384,4.78e-10,371;UBERON:0007524,4.14e-09,73;UBERON:0000926,7.30e-09,315;UBERON:0004120,7.30e-09,315;UBERON:0006603,7.30e-09,315;UBERON:0003688,8.91e-09,6;UBERON:0002358,8.91e-09,6;UBERON:0003684,8.91e-09,6;UBERON:0001178,8.91e-09,6;UBERON:0002329,1.11e-08,71;UBERON:0003059,1.11e-08,71;UBERON:0007282,1.11e-08,71;UBERON:0004290,1.11e-08,71;UBERON:0009618,1.11e-08,71;UBERON:0004573,1.15e-08,33;UBERON:0004571,1.15e-08,33;UBERON:0000486,1.67e-08,83;UBERON:0003077,1.89e-08,72;UBERON:0007285,1.89e-08,72;UBERON:0007500,1.98e-08,59;UBERON:0001981,1.98e-08,59;UBERON:0004537,1.98e-08,59;UBERON:0006965,1.98e-08,59;UBERON:0002199,2.70e-08,46;UBERON:0002416,2.70e-08,46;UBERON:0007503,8.69e-08,78;UBERON:0003914,1.44e-07,117;UBERON:0001134,1.79e-07,62;UBERON:0002036,1.79e-07,62;UBERON:0003082,1.79e-07,62;UBERON:0005256,3.98e-07,122;UBERON:0004457,4.14e-07,12;UBERON:0000042,4.14e-07,12;UBERON:0002385,4.90e-07,64;UBERON:0001015,4.90e-07,64;UBERON:0000383,4.90e-07,64;UBERON:0003102,6.49e-07,99 | |||
|phase1_expression=2.72517568905835,5.1384125733836,2.39622486963151,3.00219895059391,8.04529969969118,1.74467704820074,0,6.94891860769514,5.74608382039645,0,0,0,0.791300934685361,0.74259811776028,0.662794751455832,6.72325146451775,4.82155622419182,2.19093027116212,5.85519358548608,0.738726348460727,0.816002764977012,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,1.44575660953827,0.50133791063589,1.30361867064741,0.795285947051099,7.29952305453954,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0,2.09749718104953,1.92582629358047,0.417989933073621,0,0,0,0.402829317109147,0,0,0,3.24056779152704,0.0892997282840798,0,0.337834441449967,1.53316637465883,1.89853131913626,0.916008719652036,0,0,0,1.49091585508596,3.41902381494365,1.58891016975863,13.1944845544454,3.54668382198357,1.68203280042692,2.1349799145941,2.96001058100592,0.933633106199299,0.269421344139376,0.163461903113459,1.21085942115945,0,0,2.49728061464256,0,1.49448680551801,0.117434498643765,0,0,0.204154171254893,0,0.723280468230358,9.50402285825643,9.1488763833066,0.910161361938026,0.718618141816238,0.168336113954066,0.375355559615893,0,0.438977620880838,2.45190236639216,4.05642759047811,0.340296549480063,1.79389635688862,1.70845911054854,0.847727604638247,3.90118424909723,1.95799805553034,0.515281080091258,0.37223371266318,3.88185564154912,1.36411807225678,0.504867548488229,1.01254888506529,3.23292113637624,1.77504796258307,1.10827308050404,0.508681776931463,0.193260853163297,0,0,0,0,0.116193942869518,0,0.252320850875628,0,3.12899064659632,6.43240938192885,0,3.25057549622385,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,2.34434894420094,0,0.205654985406647,0,1.42913216315289,0,0,0,2.06834745212444,0,0,4.5209479819428,1.04007436911366,0,0,0,0.714889968290738,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,1.2162378064119,0,0,0,2.29723871668228,1.42636905040718,0.723906533337896,2.67119219315498,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,2.00068208423871,0,1.45579603071565,5.35286966391485,2.52323864054295,1.28855556491985,1.80567659836631,72.7704012979152,10.3473071292505,0.664225598535437,0.368738337083406,2.25897397617015,1.37060810223918,1.37257369524342,0,0,0,0,0,0.30239029332968,4.21783273291921,0.920771839728375,3.64858122762996,3.84417447767103,2.04682899626681,3.69964018630297,1.48418066444991,2.15893571323718,5.14929003408069,1.23190734020714,2.59627214591811,1.74315567689939,0,2.20557117333613,0,1.60740227430449,1.45672934405374,4.72047893853927,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.23649213977267,0,0.082509499920588,0.574265537996172,0,0,3.0934629853479,0,0,0.137836572484531,1.50388342815583,0.435050081742686,0.0852266274161009,0.979352392114111,0.330569830721956,0.192190067365106,0.127612712494584,0,4.64845549297286,9.75918275174984,0.6970372701606,0.616067160352178,0,0,2.40921484835096,0,0.372158369359667,1.2655176988749,0.571890581771475,0.511795582622668,0.42793898803392,0,0,1.61885211824983,0.823611089208164,0.824686816419805,1.01091240786658,0,3.37006764991185,0.48763373908959,3.89941583410055,0,1.09199929126389,4.94919011837995,1.13008116620243,2.2054613741845,3.3171948762061,0.876901770507525,0.578775534266688,1.9676842561399,1.01455188481352,0.30982349809975,0.563391205064483,0.143411352204052,0.392996164052485,2.1400263088875,0.354761064070598,7.81098250601357,9.22025700287725,0,0.349934720244983,0,0,0,0.753150406214233,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0.796991953004279,0,0,0.409074730008619,0,1.55519793830904,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,1.59518878185802,0,1.43612231055635,0,0.31900115973192,2.93112298885959,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.442287822516696,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0.693373365065693,0,0,0,1.39781334593624,0,0,0,0,0.193978032976839,0,1.12990370390266,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.305994652908965,1.44475294950759,0,0,0,0.429765441419957,0,1.11712960508902,0.458320848023367,0,0.19967900049899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| ||
|short_description=p@chr16:55523576..55523615,+ | |||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55523576..55523615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55523576..55523615, + |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.63e-18 | 76 |
multi fate stem cell | 5.33e-16 | 427 |
somatic stem cell | 2.47e-15 | 433 |
stem cell | 5.44e-15 | 441 |
preadipocyte | 4.19e-12 | 12 |
connective tissue cell | 4.44e-10 | 361 |
mesenchymal cell | 2.00e-09 | 354 |
muscle precursor cell | 1.87e-08 | 58 |
myoblast | 1.87e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-08 | 58 |
fat cell | 2.81e-08 | 15 |
motile cell | 8.42e-08 | 386 |
muscle cell | 1.68e-07 | 55 |
smooth muscle cell | 2.29e-07 | 43 |
smooth muscle myoblast | 2.29e-07 | 43 |
vascular associated smooth muscle cell | 4.28e-07 | 32 |
cardiocyte | 8.96e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.50e-08 | 14 |