FFCP PHASE1:Hg19::chr16:55516814..55516833,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55516814..55516833,+ | |||
|coexpression_cluster_id=C351 | |coexpression_cluster_id=C351 | ||
|description=CAGE_peak_at_chr16:55516814..55516833,+ | |description=CAGE_peak_at_chr16:55516814..55516833,+ | ||
|id=chr16:55516814..55516833,+ | |id=chr16:55516814..55516833,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.19e-35!180;CL:0000057!8.29e-22!75;CL:0000183!1.17e-13!59;CL:0000680!1.30e-13!57;CL:0000056!1.30e-13!57;CL:0000355!1.30e-13!57;CL:0000048!1.88e-13!430;CL:0000723!7.96e-13!436;CL:0000187!5.61e-12!54;CL:0000034!6.31e-12!444;CL:0000192!1.45e-10!42;CL:0000514!1.45e-10!42;CL:0000393!4.87e-10!60;CL:0000211!4.87e-10!60;CL:0002371!7.75e-10!591;CL:0002334!5.13e-09!12;CL:0002620!1.68e-08!23;CL:0000144!7.20e-08!625;CL:0000222!1.33e-07!119;CL:0000359!1.34e-07!32 | |ontology_enrichment_celltype=CL:0000055!6.19e-35!180;CL:0000057!8.29e-22!75;CL:0000183!1.17e-13!59;CL:0000680!1.30e-13!57;CL:0000056!1.30e-13!57;CL:0000355!1.30e-13!57;CL:0000048!1.88e-13!430;CL:0000723!7.96e-13!436;CL:0000187!5.61e-12!54;CL:0000034!6.31e-12!444;CL:0000192!1.45e-10!42;CL:0000514!1.45e-10!42;CL:0000393!4.87e-10!60;CL:0000211!4.87e-10!60;CL:0002371!7.75e-10!591;CL:0002334!5.13e-09!12;CL:0002620!1.68e-08!23;CL:0000144!7.20e-08!625;CL:0000222!1.33e-07!119;CL:0000359!1.34e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.09e-11;12!CL:0000723;8.86e-10;61!CL:0000048;1.13e-09;58!CL:0000134;1.32e-09;55!CL:0002320;1.67e-07;188!CL:0000034;2.77e-07;69!CL:1000306;3.04e-07;4!CL:0002547;3.04e-07;4!CL:0000136;3.90e-07;13!CL:0000569;5.59e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.79e-18,76;CL:0000048,4.41e-18,427;CL:0000723,1.99e-17,433;CL:0000034,1.39e-16,441;CL:0002320,1.40e-12,361;CL:0000134,3.42e-12,354;CL:0002334,2.13e-11,12;CL:0000219,4.53e-10,386;CL:0000136,1.69e-09,15;CL:1000306,3.82e-07,4;CL:0002547,3.82e-07,4;CL:0000569,3.82e-07,4;CL:0000011,3.82e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;5.59e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!5.56e-09!14 | |ontology_enrichment_disease=DOID:2394!5.56e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.51e-12;14!DOID:17;6.48e-07;5!DOID:450;6.48e-07;5!DOID:66;6.48e-07;5!DOID:423;6.48e-07;5!DOID:0080000;6.48e-07;5!DOID:11722;6.48e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.12e-12,14;DOID:17,4.90e-07,5;DOID:450,4.90e-07,5;DOID:66,4.90e-07,5;DOID:423,4.90e-07,5;DOID:0080000,4.90e-07,5;DOID:11722,4.90e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.38e-14!83;UBERON:0002329!3.38e-14!83;UBERON:0003077!3.38e-14!83;UBERON:0003059!3.38e-14!83;UBERON:0007282!3.38e-14!83;UBERON:0009618!3.38e-14!83;UBERON:0007285!3.38e-14!83;UBERON:0004290!6.10e-14!70;UBERON:0001134!2.65e-13!61;UBERON:0002036!2.65e-13!61;UBERON:0003082!2.65e-13!61;UBERON:0002385!4.90e-13!63;UBERON:0001015!4.90e-13!63;UBERON:0000383!4.90e-13!63;UBERON:0000486!2.19e-12!82;UBERON:0004872!6.41e-12!84;UBERON:0005256!3.60e-11!143;UBERON:0001981!1.54e-10!60;UBERON:0007500!1.54e-10!60;UBERON:0004537!1.54e-10!60;UBERON:0006965!1.54e-10!60;UBERON:0001637!1.58e-10!42;UBERON:0003509!1.58e-10!42;UBERON:0004572!1.58e-10!42;UBERON:0002199!9.29e-10!45;UBERON:0002416!9.29e-10!45;UBERON:0002049!2.12e-09!79;UBERON:0007798!2.12e-09!79;UBERON:0003914!3.23e-09!118;UBERON:0000055!3.78e-09!69;UBERON:0004573!4.11e-09!33;UBERON:0004571!4.11e-09!33;UBERON:0000490!7.72e-09!138;UBERON:0004535!9.61e-09!110;UBERON:0003102!1.00e-08!95;UBERON:0002097!2.57e-08!40;UBERON:0001009!4.68e-08!113;UBERON:0002100!2.16e-07!216;UBERON:0000947!5.13e-07!21;UBERON:0010191!5.13e-07!21 | |ontology_enrichment_uberon=UBERON:0000914!3.38e-14!83;UBERON:0002329!3.38e-14!83;UBERON:0003077!3.38e-14!83;UBERON:0003059!3.38e-14!83;UBERON:0007282!3.38e-14!83;UBERON:0009618!3.38e-14!83;UBERON:0007285!3.38e-14!83;UBERON:0004290!6.10e-14!70;UBERON:0001134!2.65e-13!61;UBERON:0002036!2.65e-13!61;UBERON:0003082!2.65e-13!61;UBERON:0002385!4.90e-13!63;UBERON:0001015!4.90e-13!63;UBERON:0000383!4.90e-13!63;UBERON:0000486!2.19e-12!82;UBERON:0004872!6.41e-12!84;UBERON:0005256!3.60e-11!143;UBERON:0001981!1.54e-10!60;UBERON:0007500!1.54e-10!60;UBERON:0004537!1.54e-10!60;UBERON:0006965!1.54e-10!60;UBERON:0001637!1.58e-10!42;UBERON:0003509!1.58e-10!42;UBERON:0004572!1.58e-10!42;UBERON:0002199!9.29e-10!45;UBERON:0002416!9.29e-10!45;UBERON:0002049!2.12e-09!79;UBERON:0007798!2.12e-09!79;UBERON:0003914!3.23e-09!118;UBERON:0000055!3.78e-09!69;UBERON:0004573!4.11e-09!33;UBERON:0004571!4.11e-09!33;UBERON:0000490!7.72e-09!138;UBERON:0004535!9.61e-09!110;UBERON:0003102!1.00e-08!95;UBERON:0002097!2.57e-08!40;UBERON:0001009!4.68e-08!113;UBERON:0002100!2.16e-07!216;UBERON:0000947!5.13e-07!21;UBERON:0010191!5.13e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.89e-11;9!UBERON:0000042;2.89e-11;9!UBERON:0003688;2.51e-10;6!UBERON:0002358;2.51e-10;6!UBERON:0003684;2.51e-10;6!UBERON:0001178;2.51e-10;6!UBERON:0001013;4.80e-09;14!UBERON:0002384;4.84e-09;198!UBERON:0004573;8.08e-08;33!UBERON:0004571;8.08e-08;33!UBERON:0004797;3.04e-07;4!UBERON:0000415;3.04e-07;4!UBERON:0007240;3.04e-07;4!UBERON:0005742;3.04e-07;4!UBERON:0005734;3.04e-07;4!UBERON:0004664;3.04e-07;4!UBERON:0004663;3.04e-07;4!UBERON:0000947;4.09e-07;21!UBERON:0010191;4.09e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.83e-14,371;UBERON:0003688,1.57e-10,6;UBERON:0002358,1.57e-10,6;UBERON:0003684,1.57e-10,6;UBERON:0001178,1.57e-10,6;UBERON:0001013,5.40e-09,14;UBERON:0004457,3.27e-08,12;UBERON:0000042,3.27e-08,12;UBERON:0004573,5.19e-08,33;UBERON:0004571,5.19e-08,33;UBERON:0001637,2.91e-07,42;UBERON:0003509,2.91e-07,42;UBERON:0004572,2.91e-07,42;UBERON:0000415,3.82e-07,4;UBERON:0007240,3.82e-07,4;UBERON:0005742,3.82e-07,4;UBERON:0005734,3.82e-07,4;UBERON:0004664,3.82e-07,4;UBERON:0004663,3.82e-07,4;UBERON:0000947,5.31e-07,21;UBERON:0010191,5.31e-07,21 | |||
|phase1_expression=3.63356758541113,5.1384125733836,1.9733616573436,4.00293193412522,9.83314407740033,3.48935409640147,0,1.89515962028049,2.61185628199839,0,0,0,0,0.37129905888014,0,4.03395087871065,1.20538905604795,4.38186054232424,1.46379839637152,0.246242116153576,1.22400414746552,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0.50133791063589,0.869079113764942,1.5905718941022,3.89307896242109,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0,0,0,1.19257444420023,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,4.0507097394088,0.267899184852239,0.22452937262617,0.112611480483322,1.53316637465883,0,1.09921046358244,0,0,0,2.98183171017191,2.02608818663328,2.38336525463794,7.45775213946916,2.4826786753885,0.560677600142307,0,0.49333509683432,0.622422070799533,0.404132016209064,0.490385709340376,0.302714855289863,1.15235184896,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0,0,0.204154171254893,0.122834317311768,1.54988671763648,4.75201142912821,6.18167323196392,0,1.43723628363248,0,0.375355559615893,0.277064115484183,0.877955241761676,1.22595118319608,3.15499923703853,0.226864366320042,1.97328599257748,1.49490172172997,1.69545520927649,2.10063767259082,1.03052529238439,0.515281080091258,0.744467425326359,3.71307930930786,1.26668106709558,1.26216887122057,2.11714766877288,1.2931684545505,2.13005755509969,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,1.68053230485111,0,0,1.59562869950922,3.12022310734098,0.257207374262142,0,0.266422179016099,0.285955987316295,1.08524321078289,0,0,1.42156779497018,0,0.602878754119172,0,0.099972991182057,0,0,0,0.479249710983165,0,1.42636905040718,1.88215698667853,3.28762116080613,1.25342674267927,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,1.42743191037729,0.788512075169673,0.35142424497814,1.50473049863859,20.4666753650386,3.10419213877515,0.664225598535437,0.737476674166813,1.12948698808508,1.17480694477644,2.05886054286514,0,0,0,0,0,0,4.21783273291921,1.99500565274481,7.85848264412606,4.48487022394953,2.55853624533352,4.50390979202101,1.48418066444991,1.07946785661859,1.06537035187876,0.574890092096664,1.55776328755086,0.464841513839837,0.120859449591622,0.601519410909855,0,2.06666006696292,2.00300284807389,1.96686622439136,0,0,0,0,0,0,0.170093705276516,0.215915916102139,4.62681758070868,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.96670718292122,0,0.15350367472613,0,0.429680979473094,0.725083469571143,0.255679882248303,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0.929691098594572,2.83331112147576,0.6970372701606,0.308033580176089,0,0,2.03856641014312,0.715624433709956,0,1.58189712359363,0.38126038784765,0,0,0.318203247925937,0,0.539617372749944,0.54907405947211,1.17812402345686,0.404364963146632,0,1.68503382495592,0.48763373908959,0.487426979262569,1.05650146756755,0.545999645631943,1.97967604735198,4.52032466480971,1.10273068709225,0,2.63070531152258,1.73632660280006,0.655894752046633,0.811641507850816,0.92947049429925,1.12678241012897,0,0.0982490410131212,0,0.709522128141196,1.68886108238131,5.59801318031833,0,0,0,0,0,0.188287601553558,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.996239941255349,0,0,0.818149460017238,0,2.79935628895627,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,2.50672522863403,0,0.269272933229316,0,0,2.10674464824283,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.451961481561065,0.548167698587004,0.19871461170299,0,0,0.240476460754601,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0.917983958726896,0.288950589901519,0,0,0,1.28929632425987,0,1.39641200636127,0.229160424011684,0,0,0,0,0.201550417460179,2.88239906833923,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0.335434687599266,0,0,0,0,0,0.714695326373367,0,0,1.62899880526114,2.5926644736038,3.5924609612035,0,0,1.19271615249795,0.453248366080503,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0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| ||
|short_description=p@chr16:55516814..55516833,+ | |short_description=p@chr16:55516814..55516833,+ | ||
}} | }} |
Latest revision as of 09:51, 25 July 2015
Short description: | p@chr16:55516814..55516833, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55516814..55516833, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.79e-18 | 76 |
multi fate stem cell | 4.41e-18 | 427 |
somatic stem cell | 1.99e-17 | 433 |
stem cell | 1.39e-16 | 441 |
connective tissue cell | 1.40e-12 | 361 |
mesenchymal cell | 3.42e-12 | 354 |
preadipocyte | 2.13e-11 | 12 |
motile cell | 4.53e-10 | 386 |
fat cell | 1.69e-09 | 15 |
fibroblast of tunica adventitia of artery | 3.82e-07 | 4 |
fibroblast of the aortic adventitia | 3.82e-07 | 4 |
cardiac mesenchymal cell | 3.82e-07 | 4 |
migratory trunk neural crest cell | 3.82e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.83e-14 | 371 |
omentum | 1.57e-10 | 6 |
peritoneum | 1.57e-10 | 6 |
abdominal cavity | 1.57e-10 | 6 |
visceral peritoneum | 1.57e-10 | 6 |
adipose tissue | 5.40e-09 | 14 |
cavity lining | 3.27e-08 | 12 |
serous membrane | 3.27e-08 | 12 |
systemic artery | 5.19e-08 | 33 |
systemic arterial system | 5.19e-08 | 33 |
artery | 2.91e-07 | 42 |
arterial blood vessel | 2.91e-07 | 42 |
arterial system | 2.91e-07 | 42 |
artery wall | 3.82e-07 | 4 |
tunica adventitia of artery | 3.82e-07 | 4 |
adventitia | 3.82e-07 | 4 |
tunica adventitia of blood vessel | 3.82e-07 | 4 |
aorta tunica adventitia | 3.82e-07 | 4 |
aorta wall | 3.82e-07 | 4 |
aorta | 5.31e-07 | 21 |
aortic system | 5.31e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.12e-12 | 14 |
musculoskeletal system disease | 4.90e-07 | 5 |
myotonic disease | 4.90e-07 | 5 |
muscle tissue disease | 4.90e-07 | 5 |
myopathy | 4.90e-07 | 5 |
muscular disease | 4.90e-07 | 5 |
myotonic dystrophy | 4.90e-07 | 5 |