FFCP PHASE1:Hg19::chr16:50680042..50680056,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:50680042..50680056,+
|short_description=p@chr16:50680042..50680056,+
|description=CAGE_peak_at_chr16:50680042..50680056,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:50680042..50680056,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50680042..50680056,+ | |||
|id=chr16:50680042..50680056,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.44e-20!115;UBERON:0001049!8.21e-18!57;UBERON:0005068!8.21e-18!57;UBERON:0006241!8.21e-18!57;UBERON:0007135!8.21e-18!57;UBERON:0000955!2.52e-15!69;UBERON:0006238!2.52e-15!69;UBERON:0001017!3.35e-15!82;UBERON:0002616!3.65e-15!59;UBERON:0002298!1.64e-14!8;UBERON:0005743!2.98e-14!86;UBERON:0000073!9.37e-14!94;UBERON:0001016!9.37e-14!94;UBERON:0001896!1.26e-10!3;UBERON:0005290!1.26e-10!3;UBERON:0010096!1.26e-10!3;UBERON:0002780!2.30e-10!41;UBERON:0001890!2.30e-10!41;UBERON:0006240!2.30e-10!41;UBERON:0003075!2.84e-10!86;UBERON:0007284!2.84e-10!86;UBERON:0003076!4.34e-10!15;UBERON:0003057!4.34e-10!15;UBERON:0003080!4.64e-10!42;UBERON:0002346!1.28e-09!90;UBERON:0004733!1.61e-09!12;UBERON:0002028!1.61e-09!12;UBERON:0007277!1.61e-09!12;UBERON:0002020!3.91e-09!34;UBERON:0003528!3.91e-09!34;UBERON:0001893!4.44e-09!34;UBERON:0004732!9.77e-09!13;UBERON:0000033!2.30e-08!123;UBERON:0001869!6.29e-08!32;UBERON:0002791!9.00e-08!33;UBERON:0000153!9.53e-08!129;UBERON:0007811!9.53e-08!129;UBERON:0000025!2.65e-07!194;UBERON:0001950!9.34e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10 | |||
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| ||
|short_description=p@chr16:50680042..50680056,+ | |||
}} | }} |
Latest revision as of 09:33, 25 July 2015
Short description: | p@chr16:50680042..50680056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50680042..50680056, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |