FFCP PHASE1:Hg19::chr16:50664175..50664188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50664175..50664188,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50664175..50664188,+ | |description=CAGE_peak_at_chr16:50664175..50664188,+ | ||
|id=chr16:50664175..50664188,+ | |id=chr16:50664175..50664188,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.48e-22;12!CL:0002253;2.74e-15;2!CL:0002563;2.61e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12;CL:0002253,2.74e-15,2;CL:0002563,2.61e-08,4;CL:0000223,2.67e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.61e-24;11!UBERON:0009497;2.31e-20;13!UBERON:0001041;1.29e-15;30!UBERON:0003104;5.95e-15;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.73e-29;1!DOID:1357;2.73e-29;1!DOID:3119;4.38e-09;14!DOID:5409;2.35e-08;4!DOID:0050615;5.09e-08;16!DOID:7;1.29e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.16e-29,1;DOID:1357,3.16e-29,1;DOID:305,7.30e-10,106;DOID:3119,4.38e-09,14;DOID:5409,2.26e-08,4;DOID:0050615,5.09e-08,16;DOID:0050687,2.39e-07,143;DOID:7,2.91e-07,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001764;2.73e-29;1!UBERON:0001825;2.73e-29;1!UBERON:0002107;3.46e-14;19!UBERON:0006925;3.46e-14;19!UBERON:0002423;5.84e-11;25!UBERON:0002365;2.42e-08;31!UBERON:0002330;2.42e-08;31!UBERON:0001052;2.61e-08;4!UBERON:0001242;2.61e-08;4!UBERON:0001262;2.61e-08;4!UBERON:0004786;2.61e-08;4!UBERON:0004808;2.61e-08;4!UBERON:0001277;2.61e-08;4!UBERON:0002368;6.92e-08;33!UBERON:0004907;6.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.16e-29,1;UBERON:0001825,3.16e-29,1;UBERON:0002107,3.46e-14,19;UBERON:0006925,3.46e-14,19;UBERON:0008836,3.46e-14,19;UBERON:0008835,2.35e-12,22;UBERON:0003894,2.35e-12,22;UBERON:0009854,7.52e-12,23;UBERON:0007499,5.84e-11,25;UBERON:0009497,5.84e-11,25;UBERON:0000015,5.84e-11,25;UBERON:0002423,5.84e-11,25;UBERON:0006235,5.84e-11,25;UBERON:0004161,5.84e-11,25;UBERON:0009856,1.45e-10,26;UBERON:0002365,5.69e-09,31;UBERON:0002330,5.69e-09,31;UBERON:0005911,5.90e-09,82;UBERON:0003929,6.97e-09,54;UBERON:0001052,2.61e-08,4;UBERON:0001242,2.61e-08,4;UBERON:0001262,2.61e-08,4;UBERON:0004786,2.61e-08,4;UBERON:0004808,2.61e-08,4;UBERON:0001277,2.61e-08,4;UBERON:0002368,5.08e-08,35;UBERON:0004907,6.77e-07,5 | |||
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| ||
|short_description=p@chr16:50664175..50664188,+ | |short_description=p@chr16:50664175..50664188,+ | ||
}} | }} |
Latest revision as of 09:32, 25 July 2015
Short description: | p@chr16:50664175..50664188, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50664175..50664188, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
epithelial cell of large intestine | 2.74e-15 | 2 |
intestinal epithelial cell | 2.61e-08 | 4 |
endodermal cell | 2.67e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.16e-29 | 1 |
paranasal sinus | 3.16e-29 | 1 |
liver | 3.46e-14 | 19 |
digestive gland | 3.46e-14 | 19 |
liver bud | 3.46e-14 | 19 |
hepatic diverticulum | 2.35e-12 | 22 |
liver primordium | 2.35e-12 | 22 |
digestive tract diverticulum | 7.52e-12 | 23 |
epithelial sac | 5.84e-11 | 25 |
epithelium of foregut-midgut junction | 5.84e-11 | 25 |
anatomical boundary | 5.84e-11 | 25 |
hepatobiliary system | 5.84e-11 | 25 |
foregut-midgut junction | 5.84e-11 | 25 |
septum transversum | 5.84e-11 | 25 |
sac | 1.45e-10 | 26 |
exocrine gland | 5.69e-09 | 31 |
exocrine system | 5.69e-09 | 31 |
endo-epithelium | 5.90e-09 | 82 |
gut epithelium | 6.97e-09 | 54 |
rectum | 2.61e-08 | 4 |
intestinal mucosa | 2.61e-08 | 4 |
wall of intestine | 2.61e-08 | 4 |
gastrointestinal system mucosa | 2.61e-08 | 4 |
gastrointestinal system epithelium | 2.61e-08 | 4 |
intestinal epithelium | 2.61e-08 | 4 |
endocrine gland | 5.08e-08 | 35 |
lower digestive tract | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.16e-29 | 1 |
maxillary sinus cancer | 3.16e-29 | 1 |
carcinoma | 7.30e-10 | 106 |
gastrointestinal system cancer | 4.38e-09 | 14 |
lung small cell carcinoma | 2.26e-08 | 4 |
respiratory system cancer | 5.09e-08 | 16 |
cell type cancer | 2.39e-07 | 143 |
disease of anatomical entity | 2.91e-07 | 39 |