FFCP PHASE1:Hg19::chr16:30907152..30907203,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30907152..30907203,+ | |||
|description=CAGE_peak_at_chr16:30907152..30907203,+ | |description=CAGE_peak_at_chr16:30907152..30907203,+ | ||
|id=chr16:30907152..30907203,+ | |id=chr16:30907152..30907203,+ | ||
|ontology_enrichment_celltype=CL:0002159!4.93e-07!13 | |ontology_enrichment_celltype=CL:0002159!4.93e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.23e-13;4!CL:0000731;2.23e-13;4!CL:0002159;5.67e-13;14!CL:0000307;3.67e-09;3!CL:0000240;2.27e-08;6!CL:0000311;2.27e-08;6!CL:0000079;2.27e-08;6!CL:0000237;2.27e-08;6!CL:0000575;1.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.98e-13,4;CL:0000731,2.98e-13,4;CL:0002159,5.67e-13,14;CL:0000068,7.07e-09,3;CL:0000069,7.07e-09,3;CL:0000307,7.07e-09,3;CL:0000377,7.07e-09,3;CL:0000240,1.54e-08,6;CL:0000311,1.54e-08,6;CL:0000079,1.54e-08,6;CL:0000237,1.54e-08,6;CL:0000036,1.54e-08,6;CL:0000357,1.54e-08,6;CL:0000114,1.54e-08,6;CL:0000575,1.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;3.67e-09;3!CL:0000357;2.27e-08;6!CL:0000114;2.27e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-08!115;UBERON:0000475!4.98e-08!365;UBERON:0000468!3.24e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!2.78e-08!115;UBERON:0000475!4.98e-08!365;UBERON:0000468!3.24e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.93e-12;12!UBERON:0000365;1.07e-10;5!UBERON:0003126;3.04e-10;7!UBERON:0001005;3.04e-10;7!UBERON:0005910;6.60e-09;6!UBERON:0000964;4.73e-08;4!UBERON:0010409;4.73e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.34e-10,5;UBERON:0003126,5.83e-10,7;UBERON:0001005,5.83e-10,7;UBERON:0005910,7.96e-09,6;UBERON:0000964,4.80e-08,4;UBERON:0010409,4.80e-08,4;UBERON:0004348,4.80e-08,4;UBERON:0005427,4.80e-08,4 | |||
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| ||
|short_description=p@chr16:30907152..30907203,+ | |short_description=p@chr16:30907152..30907203,+ | ||
}} | }} |
Latest revision as of 08:20, 25 July 2015
Short description: | p@chr16:30907152..30907203, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30907152..30907203, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.98e-13 | 4 |
urothelial cell | 2.98e-13 | 4 |
general ecto-epithelial cell | 5.67e-13 | 14 |
duct epithelial cell | 7.07e-09 | 3 |
branched duct epithelial cell | 7.07e-09 | 3 |
tracheal epithelial cell | 7.07e-09 | 3 |
tracheoblast | 7.07e-09 | 3 |
stratified squamous epithelial cell | 1.54e-08 | 6 |
keratin accumulating cell | 1.54e-08 | 6 |
stratified epithelial cell | 1.54e-08 | 6 |
keratinizing barrier epithelial cell | 1.54e-08 | 6 |
epithelial fate stem cell | 1.54e-08 | 6 |
stratified epithelial stem cell | 1.54e-08 | 6 |
surface ectodermal cell | 1.54e-08 | 6 |
corneal epithelial cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.34e-10 | 5 |
trachea | 5.83e-10 | 7 |
respiratory airway | 5.83e-10 | 7 |
transitional epithelium | 7.96e-09 | 6 |
cornea | 4.80e-08 | 4 |
eye surface | 4.80e-08 | 4 |
optic eminence | 4.80e-08 | 4 |
corneal primordium | 4.80e-08 | 4 |